Sequence Description Alias PCC hrr Cre12.g485800 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.892707949684 1 Cre13.g562850 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein 0.846195144642 3 Cre09.g411200 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein 0.813544158423 5 Cre08.g358540 0.808066403401 5 Cre13.g565650 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 0.803524458133 13 Cre06.g273700 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein 0.781234813934 7 Cre14.g624350 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) 0.780290162023 12 Cre10.g444550 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease 0.779188656111 9 Cre08.g358538 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase 0.778824273251 9 Cre13.g580300 ABC transporter I family member 19 OS=Arabidopsis thaliana 0.776350700528 14 Cre03.g144184 0.770748526048 13 Cre17.g731050 ABC transporter I family member 20 OS=Arabidopsis thaliana 0.768023688128 18 Cre05.g246552 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.766757537691 17 Cre02.g142146 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.76111003788 14 Cre05.g242400 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGR5-like component 0.757372172906 15 Cre03.g145567 0.751376861711 16 Cre17.g740950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.747932892276 17 Cre16.g679250 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.7444756842 21 Cre09.g395650 0.740709581085 19 Cre13.g587500 Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica 0.737434043804 20 Cre13.g571560 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DET1 regulator component 0.736029977166 21 Cre06.g266900 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana 0.73556580516 22 Cre16.g690350 0.727945305525 23 Cre02.g078939 Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri 0.721602826526 24 Cre06.g310500 External stimuli response.light.UV-B light.UV-B signal transduction transcriptional regulator 0.71923353114 25 Cre08.g384650 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.717056828783 26 Cre13.g578650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF173 protein 0.712781473084 70 Cre08.g379550 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter 0.709874123153 28 Cre12.g558550 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.709871884165 29 Cre12.g519300 0.709306357622 32 Cre04.g221550 0.704461210838 31 Cre08.g365900 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LhcSR-dependent machinery.LhcSR protein 0.693265565071 32 Cre16.g673001 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase 0.690880895275 33 Cre03.g144164 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease 0.688605384339 41 Cre04.g215050 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid beta ring hydroxylase 0.686787080192 35 Cre01.g053850 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 0.68589228624 36 Cre14.g610850 0.685630007376 45 Cre01.g028600 Tropinone reductase homolog At2g29290 OS=Arabidopsis thaliana 0.683787106619 38 Cre09.g398252 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.67901491402 62 Cre09.g397250 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.delta-7/delta-9 fatty acid desaturase 0.677896693309 41 Cre06.g274650 0.677729100968 43 Cre03.g206929 Protein modification.peptide maturation.plastid.EGY protease 0.675112981938 43 Cre02.g110300 0.671221971382 44 Cre07.g320450 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.669530174544 45 Cre07.g315150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.RBD1 protein 0.668879090096 46 Cre08.g381516 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.659276379763 48 Cre13.g587450 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.656008662872 49 Cre01.g055151 0.652613245882 76 Cre08.g360801 0.651958486171 51 Cre09.g393900 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 213.2) & Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Oryza sativa subsp. japonica 0.651534840282 52 Cre06.g290350 0.651159017777 53 Cre07.g320400 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.651057881354 54 Cre04.g225050 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component 0.647193888807 56 Cre06.g281800 0.64569561488 65 Cre17.g729800 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.642126071626 64 Cre01.g016150 0.641821321039 59 Cre16.g677800 0.640863721059 61 Cre02.g088500 0.638236200662 84 Cre16.g686400 0.631748282774 63 Cre03.g195200 0.631642959517 91 Cre03.g145587 Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana 0.631116552173 65 Cre06.g251150 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP2 protein 0.630485381215 66 Cre02.g109950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP1 protein 0.629216838891 68 Cre06.g281250 0.619629687132 70 Cre17.g715700 Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana 0.617489797911 82 Cre17.g712400 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.TerC protein 0.614946501103 99 Cre17.g733174 0.606943558394 74 Cre08.g380000 0.606075260677 75 Cre09.g394325 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.599834475792 80 Cre17.g721700 Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana 0.598470010074 81 Cre02.g088400 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease 0.59540965105 83 Cre06.g261500 0.594562419555 90 Cre03.g197750 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase 0.590888682748 90 Cre08.g360850 0.587601534506 94 Cre04.g220633 0.585826230164 96 Cre16.g664350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyll dephytylase (CLD) 0.584796471926 97 Cre01.g016750 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).PsbS-dependent machinery.PsbS protein 0.583453891226 99