Sequence Description Alias PCC hrr Cre12.g493550 0.950963488536 2 Cre12.g492200 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor 0.942125234625 2 Cre11.g467751 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase 0.93406253425 3 Cre17.g711457 0.926377719292 7 Cre02.g143587 0.923859718624 7 Cre10.g425501 Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica 0.91881131132 19 Cre06.g290250 0.917494672165 22 Cre13.g568700 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component 0.91387527967 28 Cre02.g120350 0.913326173663 21 Cre01.g003450 0.911694739911 10 Cre08.g382900 0.910492317947 11 Cre11.g468356 0.908959879341 30 Cre03.g190550 0.908581345616 26 Cre10.g465850 0.90789329506 14 Cre01.g010650 0.907437932517 15 Cre08.g364050 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component 0.906596733189 16 Cre17.g734050 0.906547692503 32 Cre12.g506650 0.905975265247 37 Cre07.g319000 0.905626414697 59 Cre02.g083300 0.904723992995 20 Cre16.g695300 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component 0.903580254662 21 Cre17.g745547 0.903306949843 34 Cre12.g488100 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component 0.902092494982 23 Cre09.g410300 0.900653232049 24 Cre03.g174500 Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 0.899642433038 44 Cre12.g526950 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF5 component 0.899521764918 60 Cre13.g587800 0.898944007751 27 Cre03.g176651 0.897694227624 28 Cre03.g171250 0.894220333186 41 Cre14.g633100 0.893531406559 30 Cre14.g618860 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component 0.893274044532 98 Cre08.g380151 0.892475503471 32 Cre15.g636650 0.892264583211 33 Cre03.g152450 0.891929098371 34 Cre02.g078150 0.891567548656 35 Cre03.g204950 0.891021779933 36 Cre09.g386800 0.890085837628 37 Cre09.g400000 0.884928434277 38 Cre17.g712200 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.884416396462 86 Cre07.g313500 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.NUP214 nucleoporin 0.883307167155 59 Cre12.g487600 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component 0.881718240547 89 Cre02.g083050 0.881572219394 43 Cre07.g326010 0.880011766056 92 Cre02.g084900 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.RPAP3 polymerase- II regulator protein 0.87996552546 45 Cre16.g679400 0.879349057745 51 Cre02.g142900 0.878521089017 48 Cre02.g143600 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component 0.878220099687 49 Cre10.g459700 0.876721780312 55 Cre12.g537671 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana 0.876504027965 52 Cre16.g687301 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) 0.876447430244 53 Cre10.g452200 0.875446496971 54 Cre01.g012450 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.875200271358 87 Cre12.g490250 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-D cofactor 0.874316222534 56 Cre12.g552650 0.87406742158 57 Cre13.g567250 0.873977849013 58 Cre17.g745147 0.873680824414 59 Cre10.g464950 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component 0.873350216771 80 Cre01.g038151 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.87318291515 61 Cre12.g524100 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component 0.871447894006 63 Cre01.g003500 0.870835624354 80 Cre01.g021000 Vesicle trafficking.endomembrane trafficking.BLOC-1 endosome-to-vacuole sorting complex.BLOS1 component 0.869090647816 67 Cre03.g162150 0.868534557048 68 Cre14.g619800 0.868396921733 73 Cre07.g341150 0.868298504316 71 Cre01.g007774 0.867910312482 72 Cre17.g698750 0.866355318056 75 Cre11.g467542 0.866172746398 76 Cre10.g420400 0.865589160621 77 Cre01.g048900 0.86480821181 78 Cre06.g304550 0.864629962852 98 Cre08.g377200 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana 0.864324589285 82 Cre03.g205000 0.864184965402 83 Cre09.g400664 0.863566885116 88 Cre03.g192400 0.863550156054 85 Cre02.g086887 Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana 0.863476853476 86 Cre06.g283634 0.862951787886 88 Cre14.g630150 0.862590077367 89 Cre07.g347700 0.862089118942 91 Cre06.g263250 0.859416272088 92 Cre17.g746047 0.859271037324 93 Cre11.g467712 0.858783106613 95 Cre07.g336750 0.858576912252 96 Cre08.g363950 0.857268528465 98 Cre11.g477250 0.857139427837 99 Cre12.g556950 0.857109743847 100