Sequence Description Alias PCC hrr AMTR_s00028p00234070 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.VPS34/PI3K phosphatidylinositol 3-kinase component evm_27.TU.AmTr_v1.0_scaffold00028.115 0.9298413094601045 1 AMTR_s00035p00224680 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIf basal transcription factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00035.51 0.9261920113390502 2 AMTR_s00061p00208140 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.PARN poly(A)-specific ribonuclease evm_27.TU.AmTr_v1.0_scaffold00061.257 0.9177672944369143 8 AMTR_s00023p00252370 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP2) evm_27.TU.AmTr_v1.0_scaffold00023.248 0.9176598689256671 5 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9164304084283484 88 AMTR_s00119p00129000 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.NUFIP assembly factor evm_27.TU.AmTr_v1.0_scaffold00119.102 0.9145341729919357 21 AMTR_s00024p00181670 E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica evm_27.TU.AmTr_v1.0_scaffold00024.144 0.9128518555003563 15 AMTR_s00013p00135450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00013.66 0.9102600882942311 27 AMTR_s00046p00164820 Protein modification.acetylation.NatC-type N-terminal acetylase complex.NAA35 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00046.88 0.9097017661496934 64 AMTR_s00053p00089490 Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.44 0.9040524774446397 15 AMTR_s00001p00272780 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor evm_27.TU.AmTr_v1.0_scaffold00001.562 0.9025376469839244 13 AMTR_s00022p00202910 CDK5RAP3-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.238 0.9012729323132581 14 AMTR_s00042p00019010 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component evm_27.TU.AmTr_v1.0_scaffold00042.2 0.9010168868497114 13 AMTR_s00031p00234160 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00031.112 0.9008541120367947 20 AMTR_s00077p00181870 evm_27.TU.AmTr_v1.0_scaffold00077.206 0.9007316092910315 15 AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.8997784449439934 63 AMTR_s00156p00017490 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.VPS9 RAB5 guanine nucleotide exchange factor evm_27.TU.AmTr_v1.0_scaffold00156.4 0.8990272254305877 18 AMTR_s00033p00106440 RNA processing.RNA modification.rRNA/tRNA methylation.TRM61-TRM6 tRNA adenosine-methyltransferase complex.TRM6 component evm_27.TU.AmTr_v1.0_scaffold00033.50 0.8947565500013295 20 AMTR_s00022p00050920 Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.30 0.8946476219712747 21 AMTR_s00033p00236370 Nucleotide metabolism.pyrimidines.catabolism.beta-ureidopropionase evm_27.TU.AmTr_v1.0_scaffold00033.239 0.8941707615523649 22 AMTR_s00007p00264760 evm_27.TU.AmTr_v1.0_scaffold00007.353 0.8939355730940817 30 AMTR_s00010p00236050 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.282 0.8933390093403534 25 AMTR_s00113p00130190 evm_27.TU.AmTr_v1.0_scaffold00113.30 0.8921953153494573 39 AMTR_s00002p00270030 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00002.567 0.8914730764359591 27 AMTR_s00025p00098730 evm_27.TU.AmTr_v1.0_scaffold00025.81 0.8904745339016283 29 AMTR_s00041p00173130 Multi-process regulation.circadian clock.FIO1 circadian clock regulator evm_27.TU.AmTr_v1.0_scaffold00041.129 0.8904117575414799 34 AMTR_s00126p00067580 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00126.26 0.8902245931589298 31 AMTR_s00005p00261860 evm_27.TU.AmTr_v1.0_scaffold00005.203 0.8901891155875719 32 AMTR_s00019p00242560 evm_27.TU.AmTr_v1.0_scaffold00019.359 0.8901570857114444 33 AMTR_s00025p00231520 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.CG1 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00025.337 0.8901059185609881 63 AMTR_s00001p00265330 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit evm_27.TU.AmTr_v1.0_scaffold00001.403 0.888861918465281 67 AMTR_s00029p00106010 Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.107 0.8885589631235603 36 AMTR_s00049p00147690 evm_27.TU.AmTr_v1.0_scaffold00049.128 0.8882572263924703 37 AMTR_s00045p00095180 Probable GTP diphosphokinase CRSH, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.91 0.8843167486566302 40 AMTR_s00072p00168660 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS54 GARP-specific component evm_27.TU.AmTr_v1.0_scaffold00072.118 0.8836380685886679 97 AMTR_s00064p00153650 evm_27.TU.AmTr_v1.0_scaffold00064.63 0.8829963501050062 42 AMTR_s00010p00244300 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.320 0.8828075545732956 43 AMTR_s00146p00087440 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim50 component evm_27.TU.AmTr_v1.0_scaffold00146.55 0.8815418264339878 47 AMTR_s00018p00042060 evm_27.TU.AmTr_v1.0_scaffold00018.11 0.8813811248823927 48 AMTR_s00088p00170220 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.145 0.8813356957982447 49 AMTR_s00114p00113990 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC2 component evm_27.TU.AmTr_v1.0_scaffold00114.48 0.880921374569411 50 AMTR_s00021p00164610 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX-type) evm_27.TU.AmTr_v1.0_scaffold00021.119 0.8799148804938741 52 AMTR_s00056p00165600 Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.145 0.8795411967876858 85 AMTR_s00019p00253350 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-I alpha-mannosidase I evm_27.TU.AmTr_v1.0_scaffold00019.426 0.8790627206334819 54 AMTR_s00011p00243170 Transcription factor GTE6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.139 0.8770814522456715 70 AMTR_s00069p00165540 evm_27.TU.AmTr_v1.0_scaffold00069.140 0.8770409481191569 61 AMTR_s00032p00060700 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.38 0.876776644348244 61 AMTR_s00009p00247290 Phytohormones.jasmonic acid.synthesis.acyl-CoA thioesterase evm_27.TU.AmTr_v1.0_scaffold00009.243 0.8753485636438999 87 AMTR_s00016p00258810 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2A snRNP component evm_27.TU.AmTr_v1.0_scaffold00016.359 0.8742088863791856 67 AMTR_s00012p00164920 evm_27.TU.AmTr_v1.0_scaffold00012.100 0.87406872339793 68 AMTR_s00065p00132670 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00065.87 0.8726309003289849 73 AMTR_s00078p00117800 evm_27.TU.AmTr_v1.0_scaffold00078.90 0.8707901766263368 71 AMTR_s00003p00017000 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4 phosphatase complex.regulatory component (PSY2L) evm_27.TU.AmTr_v1.0_scaffold00003.5 0.8698233949259948 76 AMTR_s00007p00105480 Protein modification.phosphorylation.CAMK kinase superfamily.CDPK kinase evm_27.TU.AmTr_v1.0_scaffold00007.63 0.8696044156153724 77 AMTR_s00021p00206430 evm_27.TU.AmTr_v1.0_scaffold00021.176 0.8695493553105356 78 AMTR_s00012p00097440 evm_27.TU.AmTr_v1.0_scaffold00012.51 0.8695397409758336 91 AMTR_s00005p00222320 Protoporphyrinogen oxidase 2 OS=Spinacia oleracea evm_27.TU.AmTr_v1.0_scaffold00005.96 0.8682146919207293 84 AMTR_s00022p00154500 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.156 0.8672933889889886 89 AMTR_s00005p00248640 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG8 component evm_27.TU.AmTr_v1.0_scaffold00005.151 0.8664854486556598 90 AMTR_s00088p00169250 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.143 0.8656129883493487 92 AMTR_s00001p00247720 RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.CTU1-CTU2 tRNA thiouridylase complex.CTU1 component evm_27.TU.AmTr_v1.0_scaffold00001.303 0.8649250977779792 93 AMTR_s00095p00110450 evm_27.TU.AmTr_v1.0_scaffold00095.67 0.8646398050973778 94 AMTR_s00002p00205450 Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.201 0.8645627382068163 95 AMTR_s00038p00020700 evm_27.TU.AmTr_v1.0_scaffold00038.5 0.8641433623621587 97 AMTR_s00114p00074070 evm_27.TU.AmTr_v1.0_scaffold00114.24 0.8631660619370819 100