Sequence Description Alias PCC hrr AT1G32470 Single hybrid motif superfamily protein 0.9176133986674586 4 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.911648119360488 3 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.8986522108601495 7 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.8962475457914519 4 AT5G13510 Ribosomal protein L10 family protein 0.8945805951822114 5 AT5G40950 ribosomal protein large subunit 27 RPL27 0.8941590001797901 13 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8874372047960591 7 AT4G02530 chloroplast thylakoid lumen protein 0.8859131161520312 13 AT3G25920 ribosomal protein L15 RPL15 0.8851635018592496 30 AT3G55330 PsbP-like protein 1 PPL1 0.8834605426157737 14 AT1G32990 plastid ribosomal protein l11 PRPL11 0.8787193892412349 11 AT2G24090 Ribosomal protein L35 0.8742355847836344 12 AT1G43560 thioredoxin Y2 Aty2, ty2 0.8737217814377904 17 AT1G73060 Low PSII Accumulation 3 LPA3 0.8717869539361095 14 AT3G62030 rotamase CYP 4 ROC4 0.869501745383417 15 AT5G45680 FK506-binding protein 13 ATFKBP13, FKBP13 0.8690760382454532 21 AT3G44890 ribosomal protein L9 RPL9 0.8686612700300084 32 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8662117243329645 18 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8654433200112711 19 AT3G11630 Thioredoxin superfamily protein 0.8643946229722211 20 AT1G75350 Ribosomal protein L31 emb2184 0.8639102930206827 22 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8629978741610388 31 AT2G48070 resistance to phytophthora 1 RPH1 0.8626099803697362 23 AT2G35370 glycine decarboxylase complex H GDCH 0.8619375200257694 28 AT3G54210 Ribosomal protein L17 family protein 0.8580978992725674 30 AT2G38140 plastid-specific ribosomal protein 4 PSRP4 0.8563783622067234 26 AT2G47590 photolyase/blue-light receptor 2 PHR2 0.8543524757902602 27 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6 family protein 0.8541617627843002 33 AT3G16250 NDH-dependent cyclic electron flow 1 NDF4 0.8540051246229899 29 AT4G34190 stress enhanced protein 1 SEP1 0.851799685442286 30 AT1G50900 Ankyrin repeat family protein GDC1 0.8446615802805576 31 AT1G05190 Ribosomal protein L6 family emb2394 0.8431836770593111 66 AT3G56910 plastid-specific 50S ribosomal protein 5 PSRP5 0.8431413463452843 43 AT5G21920 YGGT family protein YLMG2, ATYLMG2 0.8430082476746834 34 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.8419602516859391 35 AT1G54500 Rubredoxin-like superfamily protein 0.8399459218633216 36 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0.8390241915177175 37 AT5G63310 nucleoside diphosphate kinase 2 NDPK2, NDPK IA IA, NDPK1A, NDPK IA, ATNDPK2 0.8387862798765471 38 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8384207806659948 49 AT1G11860 Glycine cleavage T-protein family 0.8384002424077824 77 AT5G54600 Translation protein SH3-like family protein 0.8368894261511414 49 AT2G33800 Ribosomal protein S5 family protein 0.8365280708718134 42 AT1G74730 Protein of unknown function (DUF1118) 0.8361898550205958 77 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.8311182036152174 58 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.8295398265552274 45 AT3G13120 Ribosomal protein S10p/S20e family protein 0.8294726971799072 54 AT2G28605 Photosystem II reaction center PsbP family protein 0.828610663137631 47 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.8275112200021529 48 AT1G63610 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). 0.8273028341129093 49 AT4G15510 Photosystem II reaction center PsbP family protein 0.8265172967508595 50 AT1G35680 Ribosomal protein L21 0.8256925387341163 69 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.822344282373299 71 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.8208555831784718 53 AT1G48350 Ribosomal L18p/L5e family protein 0.8204854851653905 54 AT2G21530 SMAD/FHA domain-containing protein 0.8186641460968112 61 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.818621990109437 87 AT5G52970 thylakoid lumen 15.0 kDa protein 0.8180376103692242 57 AT5G08050 Protein of unknown function (DUF1118) 0.8175000617684657 75 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.8167585965127411 68 AT1G03630 protochlorophyllide oxidoreductase C POR C, PORC 0.8162907666842107 75 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.8147489208713048 61 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.813808081836219 97 AT1G29070 Ribosomal protein L34 0.812170007054394 65 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8091378407117761 98 AT3G08740 elongation factor P (EF-P) family protein 0.8091264792236672 71 AT1G55490 chaperonin 60 beta CPN60B, LEN1 0.8079593705783434 70 AT1G59840 cofactor assembly of complex C CCB4 0.8063398415499561 71 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8054895321356174 89 AT4G01310 Ribosomal L5P family protein 0.8053252572793668 78 AT4G18370 DEGP protease 5 HHOA, DEG5, DEGP5 0.8039732689646394 76 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8037811819627889 77 AT2G43030 Ribosomal protein L3 family protein 0.8037713740833268 78 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.8025101396503683 80 AT1G70760 inorganic carbon transport protein-related CRR23 0.8020793091085197 87 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.800824801320329 82 AT5G14320 Ribosomal protein S13/S18 family 0.8000137759171223 84 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1 0.7999131398830716 85 AT1G32080 membrane protein, putative 0.7993860479137728 95 AT4G10300 RmlC-like cupins superfamily protein 0.7979424719712641 88 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7968580701054142 89 AT4G12060 Double Clp-N motif protein 0.796683323559944 90 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.7963279594120873 91 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.7947355163989235 92 AT1G07320 ribosomal protein L4 RPL4 0.7946282796581168 93 AT5G19370 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein 0.7944681899724395 94 AT3G27850 ribosomal protein L12-C RPL12-C 0.7943377170080487 95 AT4G28660 photosystem II reaction center PSB28 protein PSB28 0.7932076922843375 96 AT2G32640 Lycopene beta/epsilon cyclase protein 0.7931955007286937 97 AT1G64150 Uncharacterized protein family (UPF0016) 0.7931225116740659 98 AT1G18730 NDH dependent flow 6 NDF6 0.7926875753033359 99