Sequence Description Alias PCC hrr AMTR_s00059p00094000 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.ARP AP-endonuclease evm_27.TU.AmTr_v1.0_scaffold00059.68 0.888679816428799 3 AMTR_s00046p00170580 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).SMG7 protein evm_27.TU.AmTr_v1.0_scaffold00046.93 0.8753582279736416 9 AMTR_s00044p00063370 evm_27.TU.AmTr_v1.0_scaffold00044.34 0.8734995216102821 5 AMTR_s00002p00243900 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor evm_27.TU.AmTr_v1.0_scaffold00002.320 0.8664582645910189 5 AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.8654082147378908 29 AMTR_s00009p00207050 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00009.134 0.8631436581577541 6 AMTR_s00041p00174550 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component evm_27.TU.AmTr_v1.0_scaffold00041.131 0.8618925489278156 7 AMTR_s00048p00164020 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00048.117 0.8616455506018224 10 AMTR_s00036p00168840 Multi-process regulation.circadian clock.evening element regulation.Evening complex (EC).ELF3 component evm_27.TU.AmTr_v1.0_scaffold00036.83 0.861140311386655 9 AMTR_s00056p00036030 RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00056.20 0.8515332616921502 16 AMTR_s00174p00040410 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase evm_27.TU.AmTr_v1.0_scaffold00174.16 0.8491300830115766 15 AMTR_s00019p00230710 External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.ADO-type photoreceptor evm_27.TU.AmTr_v1.0_scaffold00019.314 0.8454259268427113 12 AMTR_s00119p00117410 RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor evm_27.TU.AmTr_v1.0_scaffold00119.91 0.8423784754287881 24 AMTR_s00017p00243480 evm_27.TU.AmTr_v1.0_scaffold00017.221 0.8379613611537381 14 AMTR_s00072p00045010 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase evm_27.TU.AmTr_v1.0_scaffold00072.15 0.8373948245940066 19 AMTR_s00103p00147670 evm_27.TU.AmTr_v1.0_scaffold00103.105 0.8364307236452927 16 AMTR_s00111p00094320 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic phosphoglucose isomerase evm_27.TU.AmTr_v1.0_scaffold00111.63 0.8310100592888284 27 AMTR_s00147p00043750 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins evm_27.TU.AmTr_v1.0_scaffold00147.17 0.8307882797995658 75 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.8301980419179514 60 AMTR_s00012p00118890 evm_27.TU.AmTr_v1.0_scaffold00012.60 0.827606306368593 25 AMTR_s00004p00164270 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP1/NUP136 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00004.181 0.8260341633129106 53 AMTR_s00061p00057890 evm_27.TU.AmTr_v1.0_scaffold00061.33 0.8253691899325606 59 AMTR_s00071p00180880 MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.184 0.8249928251122761 41 AMTR_s00019p00227240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REIL maturation factor evm_27.TU.AmTr_v1.0_scaffold00019.294 0.8227376716798396 41 AMTR_s00057p00208300 evm_27.TU.AmTr_v1.0_scaffold00057.251 0.8214680808545951 26 AMTR_s00068p00196240 evm_27.TU.AmTr_v1.0_scaffold00068.160 0.8212667538252405 36 AMTR_s00060p00187100 F-box protein SKIP28 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00060.123 0.8198830455771344 60 AMTR_s00058p00188470 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB1 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00058.186 0.8195533687384173 52 AMTR_s00019p00244830 AAA-ATPase At3g50940 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.374 0.8192721181505165 30 AMTR_s00055p00167390 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase evm_27.TU.AmTr_v1.0_scaffold00055.87 0.8167072865568338 31 AMTR_s00162p00029070 evm_27.TU.AmTr_v1.0_scaffold00162.8 0.8161376098447172 36 AMTR_s00142p00104490 evm_27.TU.AmTr_v1.0_scaffold00142.68 0.8140573527932111 63 AMTR_s00025p00208060 RNA processing.RNA modification.pseudouridylation.TruA-type tRNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00025.270 0.8116596991983256 45 AMTR_s00001p00257700 evm_27.TU.AmTr_v1.0_scaffold00001.352 0.810513399542176 37 AMTR_s00090p00122120 Amino acid metabolism.degradation.aromatic amino acid.tyrosine.fumarylacetoacetate hydrolase evm_27.TU.AmTr_v1.0_scaffold00090.61 0.8097972004185903 38 AMTR_s00107p00103680 Phytohormones.abscisic acid.perception and signalling.PYR/PYL-receptor.cytoplasm-localized receptor complex.PYL/RCAR-type receptor component evm_27.TU.AmTr_v1.0_scaffold00107.32 0.8080242525116518 40 AMTR_s00029p00202030 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00029.286 0.8071723615548676 41 AMTR_s00069p00158470 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component evm_27.TU.AmTr_v1.0_scaffold00069.131 0.8071436781820623 94 AMTR_s00081p00156000 F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00081.66 0.8067017198702683 71 AMTR_s00001p00261430 Multi-process regulation.circadian clock.evening element regulation.REVEILLE clock factor evm_27.TU.AmTr_v1.0_scaffold00001.380 0.806289344121491 45 AMTR_s00065p00037640 evm_27.TU.AmTr_v1.0_scaffold00065.16 0.8062498255791417 75 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.8037576705439081 77 AMTR_s00004p00045050 FRIGIDA-like protein 4a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.28 0.8032032810889412 48 AMTR_s00095p00122180 Protein modification.protein folding and quality control.RAC ribosome-associated chaperone complex.ZRF Hsp40-chaperone component evm_27.TU.AmTr_v1.0_scaffold00095.75 0.8031916467188827 68 AMTR_s00002p00223990 evm_27.TU.AmTr_v1.0_scaffold00002.244 0.8028898733298285 54 AMTR_s00029p00022290 Transcription factor SRM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.5 0.8022692531982604 53 AMTR_s00156p00043680 evm_27.TU.AmTr_v1.0_scaffold00156.20 0.8016176150174512 95 AMTR_s00044p00145170 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type evm_27.TU.AmTr_v1.0_scaffold00044.147 0.8011664899992779 54 AMTR_s00175p00042660 F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00175.17 0.8006908266390053 56 AMTR_s00088p00164440 RNA biosynthesis.transcriptional activation.WRKY transcription factor evm_27.TU.AmTr_v1.0_scaffold00088.137 0.799831831355728 58 AMTR_s00067p00143520 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00067.135 0.7982925718442863 59 AMTR_s00103p00067500 Multi-process regulation.circadian clock.TIC circadian clock regulator evm_27.TU.AmTr_v1.0_scaffold00103.34 0.7977092574155613 60 AMTR_s00068p00075130 5-adenylylsulfate reductase-like 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.32 0.7970267118902603 61 AMTR_s00186p00042610 F-box protein At5g39450 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00186.15 0.7964025102686128 62 AMTR_s00035p00187610 Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00035.40 0.7936849048634005 65 AMTR_s00029p00127080 evm_27.TU.AmTr_v1.0_scaffold00029.145 0.7931838526872429 66 AMTR_s00010p00265290 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00010.510 0.792583132715339 67 AMTR_s00003p00267060 0.7917849913946213 68 AMTR_s00030p00173920 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor evm_27.TU.AmTr_v1.0_scaffold00030.108 0.7916036120913389 70 AMTR_s00023p00054320 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.transfer phase.NAR1 component evm_27.TU.AmTr_v1.0_scaffold00023.21 0.7901636298974061 71 AMTR_s00061p00064900 evm_27.TU.AmTr_v1.0_scaffold00061.39 0.7896117866903438 73 AMTR_s00108p00092680 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO E3 ligase activities.SUMO E3 ligase (SIZ1) evm_27.TU.AmTr_v1.0_scaffold00108.15 0.7894182628365265 74 AMTR_s00030p00202550 evm_27.TU.AmTr_v1.0_scaffold00030.141 0.7879936474911631 76 AMTR_s00069p00055450 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.33 0.7874482608728709 77 AMTR_s00018p00087700 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec12-type guanyl-nucleotide exchange factor (GEF) evm_27.TU.AmTr_v1.0_scaffold00018.39 0.787344203102743 78 AMTR_s00009p00164690 Protein biosynthesis.translation initiation.mRNA loading.eIF-iso4F unwinding complex.eIF-iso4G component evm_27.TU.AmTr_v1.0_scaffold00009.93 0.7854664313581803 79 AMTR_s00088p00111920 evm_27.TU.AmTr_v1.0_scaffold00088.75 0.7844237735961911 80 AMTR_s00068p00082940 Protein biosynthesis.translation initiation.mRNA loading.4EHP RNA-cap-binding factor evm_27.TU.AmTr_v1.0_scaffold00068.38 0.7828588638281468 83 AMTR_s00135p00112690 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00135.65 0.7824286345947382 86 AMTR_s00017p00253050 Protein modification.phosphorylation.TKL kinase superfamily.RKF3 kinase evm_27.TU.AmTr_v1.0_scaffold00017.262 0.781024284630344 88 AMTR_s00029p00023180 F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.7 0.7806503046147321 89 AMTR_s00029p00040760 Multi-process regulation.circadian clock.morning element regulation.CHE repression factor evm_27.TU.AmTr_v1.0_scaffold00029.28 0.7783364204602323 90 AMTR_s00002p00225810 RNA biosynthesis.transcriptional activation.bHLH transcription factor evm_27.TU.AmTr_v1.0_scaffold00002.248 0.7777668260264786 91 AMTR_s00038p00206970 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase evm_27.TU.AmTr_v1.0_scaffold00038.160 0.7757678135836774 94 AMTR_s00002p00272130 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.CDC73/PHP component evm_27.TU.AmTr_v1.0_scaffold00002.665 0.77419743427918 100