Sequence Description Alias PCC hrr AMTR_s00164p00059220 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.VSR vacuolar sorting receptor evm_27.TU.AmTr_v1.0_scaffold00164.25 0.9537860029720379 1 AMTR_s00061p00167160 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00061.171 0.9521429029870523 2 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9483228965114604 7 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9439403503484092 5 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9426854709474527 7 AMTR_s00085p00139780 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.MORC-type auxilary factor evm_27.TU.AmTr_v1.0_scaffold00085.89 0.9424543993850728 17 AMTR_s00037p00070040 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00037.19 0.9411114549315927 32 AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.940827593037913 12 AMTR_s00057p00185220 Probable serine/threonine-protein phosphatase 2A regulatory subunit B subunit TON2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.200 0.9398133169804236 9 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9390704919579118 23 AMTR_s00104p00054580 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein evm_27.TU.AmTr_v1.0_scaffold00104.16 0.9384069099333645 14 AMTR_s00041p00123630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component evm_27.TU.AmTr_v1.0_scaffold00041.92 0.9372168594378175 12 AMTR_s00085p00089520 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component evm_27.TU.AmTr_v1.0_scaffold00085.48 0.9358322019147788 13 AMTR_s00010p00227470 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein evm_27.TU.AmTr_v1.0_scaffold00010.255 0.9357790865782839 14 AMTR_s00133p00115730 Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.60 0.935234251119114 16 AMTR_s00029p00058110 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.52 0.9351781072589508 16 AMTR_s00029p00206820 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component evm_27.TU.AmTr_v1.0_scaffold00029.298 0.9342816137690182 23 AMTR_s00049p00115800 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00049.91 0.9318929393243485 47 AMTR_s00055p00196140 Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.133 0.9315777770559622 23 AMTR_s00049p00191680 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.GP210 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00049.202 0.9307376781388613 20 AMTR_s00179p00033790 evm_27.TU.AmTr_v1.0_scaffold00179.7 0.9305426571571913 21 AMTR_s00002p00118630 evm_27.TU.AmTr_v1.0_scaffold00002.74 0.929602881370058 27 AMTR_s00030p00120950 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.69 0.9292035965464837 23 AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) evm_27.TU.AmTr_v1.0_scaffold00009.114 0.9291668758221454 25 AMTR_s00011p00229900 evm_27.TU.AmTr_v1.0_scaffold00011.109 0.9290387426721542 25 AMTR_s00029p00058780 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.53 0.9279243124903467 26 AMTR_s00155p00036470 evm_27.TU.AmTr_v1.0_scaffold00155.17 0.927578263654631 27 AMTR_s00025p00243690 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00025.377 0.9274549628170797 28 AMTR_s00044p00098420 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00044.69 0.9274016536347242 55 AMTR_s00104p00047720 Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.13 0.9264404165565711 30 AMTR_s00027p00246350 Chaperone protein dnaJ GFA2, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.153 0.9262360981261366 31 AMTR_s00069p00204310 evm_27.TU.AmTr_v1.0_scaffold00069.223 0.9249398010746623 32 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9246908866973679 36 AMTR_s00059p00193620 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase evm_27.TU.AmTr_v1.0_scaffold00059.214 0.924368111810267 74 AMTR_s00023p00029140 RNA biosynthesis.siRNA biogenesis.CLSY1/2 RDR2-polymerase accessory protein evm_27.TU.AmTr_v1.0_scaffold00023.7 0.9242467228625123 35 AMTR_s00148p00090060 Helicase protein MOM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.61 0.9242260659406402 36 AMTR_s00122p00126300 evm_27.TU.AmTr_v1.0_scaffold00122.63 0.9242015803203748 37 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9232609553405667 38 AMTR_s00002p00269010 evm_27.TU.AmTr_v1.0_scaffold00002.545 0.9232553960889062 39 AMTR_s00147p00073200 evm_27.TU.AmTr_v1.0_scaffold00147.35 0.922949495518924 40 AMTR_s00119p00132020 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class IV ARF-GAP protein evm_27.TU.AmTr_v1.0_scaffold00119.107 0.9228028176094591 59 AMTR_s00027p00246570 Chaperone protein dnaJ GFA2, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.154 0.9224900143155891 43 AMTR_s00061p00215990 Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.WYRD inner centromere protein evm_27.TU.AmTr_v1.0_scaffold00061.279 0.9219973131380786 44 AMTR_s00004p00135010 Cold shock protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.130 0.9214228146205796 45 AMTR_s00137p00063430 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00137.24 0.9211340942786096 82 AMTR_s00106p00107190 evm_27.TU.AmTr_v1.0_scaffold00106.78 0.9208127860114168 48 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00056.21 0.9208005811450282 77 AMTR_s00071p00058700 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.33 0.9205407731448404 56 AMTR_s00059p00171720 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00059.168 0.9203653095868675 69 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9203426038803038 52 AMTR_s00062p00101520 Cytoskeleton.microtubular network.microtubule dynamics.SPR2 microtubule-stabilizing factor evm_27.TU.AmTr_v1.0_scaffold00062.74 0.9200864062648679 53 AMTR_s00119p00089670 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC6-type golgin evm_27.TU.AmTr_v1.0_scaffold00119.69 0.9200454433753004 54 AMTR_s00002p00079350 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component evm_27.TU.AmTr_v1.0_scaffold00002.39 0.9195261939306417 57 AMTR_s00047p00208850 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component evm_27.TU.AmTr_v1.0_scaffold00047.148 0.9186302459058273 59 AMTR_s00045p00203910 Chromatin organisation.histone modifications.histone arginine methylation.PRMT4 histone methylase evm_27.TU.AmTr_v1.0_scaffold00045.269 0.9184679922045842 60 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00086.104 0.9173647986688982 94 AMTR_s00067p00142170 Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate synthase evm_27.TU.AmTr_v1.0_scaffold00067.132 0.9164280826429516 65 AMTR_s00003p00052150 evm_27.TU.AmTr_v1.0_scaffold00003.32 0.916351471328822 73 AMTR_s00068p00160530 evm_27.TU.AmTr_v1.0_scaffold00068.112 0.9161861649781393 70 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9160884556051531 68 AMTR_s00025p00038580 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit evm_27.TU.AmTr_v1.0_scaffold00025.17 0.9153912802842302 71 AMTR_s00030p00239430 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.208 0.9153786863070473 72 AMTR_s00060p00130340 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00060.71 0.9151742292760672 73 AMTR_s00109p00056900 La protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.42 0.9151349619360234 74 AMTR_s00015p00161490 Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00015.32 0.9151057019034428 75 AMTR_s00049p00084680 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT serine O-alpha-galactosyltransferase evm_27.TU.AmTr_v1.0_scaffold00049.55 0.9146598653368567 76 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9144756726656139 100 AMTR_s00122p00082000 Cell cycle.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.catalytic component evm_27.TU.AmTr_v1.0_scaffold00122.30 0.9139948022628098 78 AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00003.89 0.9133874106200836 86 AMTR_s00011p00222440 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factors.AUL clathrin uncoating protein evm_27.TU.AmTr_v1.0_scaffold00011.98 0.9124570031467791 80 AMTR_s00029p00102340 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein evm_27.TU.AmTr_v1.0_scaffold00029.99 0.9124086137173819 81 AMTR_s00016p00215520 evm_27.TU.AmTr_v1.0_scaffold00016.191 0.9122372769884354 82 AMTR_s00046p00223780 Protein degradation.peptidase families.metallopeptidase activities.M3 protease evm_27.TU.AmTr_v1.0_scaffold00046.160 0.9122259079507564 84 AMTR_s00092p00062310 Coenzyme metabolism.NAD/NADP biosynthesis.NAD synthase evm_27.TU.AmTr_v1.0_scaffold00092.27 0.9122030769512932 85 AMTR_s00016p00255950 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00016.338 0.9120143013028099 86 AMTR_s00009p00253500 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00009.266 0.9117686935761613 100 AMTR_s00092p00098010 evm_27.TU.AmTr_v1.0_scaffold00092.55 0.9113639735978107 89 AMTR_s00004p00160120 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC1 component evm_27.TU.AmTr_v1.0_scaffold00004.172 0.9113493756959572 90 AMTR_s00003p00212560 evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9113122287037839 91 AMTR_s00010p00086200 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component evm_27.TU.AmTr_v1.0_scaffold00010.48 0.9108272121206339 93 AMTR_s00039p00226980 evm_27.TU.AmTr_v1.0_scaffold00039.208 0.9104885673633076 95 AMTR_s00006p00246940 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00006.134 0.9104465307773247 96 AMTR_s00090p00135570 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF6 component evm_27.TU.AmTr_v1.0_scaffold00090.68 0.9102996435575804 98