Sequence Description Alias PCC hrr AMTR_s00009p00236210 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP11/MURE component evm_27.TU.AmTr_v1.0_scaffold00009.196 0.9632652776918179 1 AMTR_s00003p00075520 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.43 0.9516711954115472 2 AMTR_s00071p00072250 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.42 0.937012344522904 5 AMTR_s00031p00067070 Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana 0.9354367510710128 4 AMTR_s00055p00224220 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme evm_27.TU.AmTr_v1.0_scaffold00055.175 0.9338666187021503 6 AMTR_s00006p00253660 Cell cycle.organelle machineries.DNA replication.type-Ia DNA topoisomerase evm_27.TU.AmTr_v1.0_scaffold00006.171 0.9294240446566644 11 AMTR_s00029p00193780 Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.262 0.9279140424092837 7 AMTR_s00017p00132450 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic110 component evm_27.TU.AmTr_v1.0_scaffold00017.54 0.9271464864535983 16 AMTR_s00049p00210350 Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.234 0.9256390259222702 9 AMTR_s00062p00102370 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP evm_27.TU.AmTr_v1.0_scaffold00062.75 0.9238253465633394 15 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component evm_27.TU.AmTr_v1.0_scaffold00012.260 0.9224512549176754 11 AMTR_s00040p00213060 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic100 component evm_27.TU.AmTr_v1.0_scaffold00040.228 0.9222921752531248 39 AMTR_s00041p00057360 evm_27.TU.AmTr_v1.0_scaffold00041.29 0.9221584310383868 13 AMTR_s00022p00070510 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00022.51 0.921013177779203 14 AMTR_s00016p00252780 Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana 0.9198397504944404 15 AMTR_s00114p00128980 evm_27.TU.AmTr_v1.0_scaffold00114.59 0.9191992169080482 23 AMTR_s00354p00009120 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component evm_27.TU.AmTr_v1.0_scaffold00354.1 0.9188380553298928 17 AMTR_s00025p00203820 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.biotin carboxylase subunit evm_27.TU.AmTr_v1.0_scaffold00025.261 0.9129643787831999 18 AMTR_s00077p00031710 Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.15 0.9124792600900424 19 AMTR_s00032p00226710 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase evm_27.TU.AmTr_v1.0_scaffold00032.243 0.9098451658602155 20 AMTR_s00038p00071780 Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.30 0.9086490515691412 21 AMTR_s00175p00037000 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00175.11 0.908466525813752 33 AMTR_s00079p00107040 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00079.39 0.9080982175982516 29 AMTR_s00027p00142670 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.43 0.9041620539758317 79 AMTR_s00103p00143070 Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00103.100 0.9041240339856971 26 AMTR_s00056p00043140 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.CRS2-CAF splicing factor complexes.CAF component evm_27.TU.AmTr_v1.0_scaffold00056.26 0.9033894074799889 27 AMTR_s00011p00233950 Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana 0.9028940046550371 33 AMTR_s00056p00185560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.ECB2/VAC1 RNA editing factor 0.9007201750107016 93 AMTR_s00024p00225420 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.224 0.9002988613946552 30 AMTR_s00130p00019530 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00130.4 0.8993161246728933 31 AMTR_s00031p00204460 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component evm_27.TU.AmTr_v1.0_scaffold00031.99 0.8984742873792855 80 AMTR_s00106p00119930 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein evm_27.TU.AmTr_v1.0_scaffold00106.91 0.8982249424488776 34 AMTR_s00047p00218860 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.FLN2 regulatory factor evm_27.TU.AmTr_v1.0_scaffold00047.167 0.8961332424824716 77 AMTR_s00006p00259220 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase evm_27.TU.AmTr_v1.0_scaffold00006.214 0.8959197829220706 36 AMTR_s00013p00250400 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.Z-ISO zeta-carotene isomerase evm_27.TU.AmTr_v1.0_scaffold00013.225 0.8946803249946739 37 AMTR_s00080p00141940 tRNA ligase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.64 0.8943458653116741 56 AMTR_s00100p00051890 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.granule-bound starch (amylose) synthase evm_27.TU.AmTr_v1.0_scaffold00100.11 0.8942381222303258 39 AMTR_s00004p00110090 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase evm_27.TU.AmTr_v1.0_scaffold00004.89 0.8936860608790322 96 AMTR_s00062p00195710 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component evm_27.TU.AmTr_v1.0_scaffold00062.205 0.8932074215624368 41 AMTR_s00107p00082420 DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00107.24 0.8928541242654474 42 AMTR_s00077p00167440 evm_27.TU.AmTr_v1.0_scaffold00077.179 0.8927814741221626 100 AMTR_s00078p00161460 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00078.147 0.8924701030687701 63 AMTR_s00049p00226280 Chloroplast sensor kinase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.272 0.8920590220246418 75 AMTR_s00177p00028500 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.5 0.8906629715260241 46 AMTR_s00045p00114550 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM3-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00045.110 0.8902105877094204 47 AMTR_s00153p00036670 Lipid metabolism.galactolipid and sulfolipid synthesis.plastidial UDP-glucose pyrophosphorylase evm_27.TU.AmTr_v1.0_scaffold00153.14 0.8894295455562201 48 AMTR_s00067p00115040 evm_27.TU.AmTr_v1.0_scaffold00067.92 0.8893891083424221 63 AMTR_s00155p00027590 Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.11 0.888527486032478 52 AMTR_s00029p00147240 Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.173 0.8881556092873013 97 AMTR_s00029p00193710 Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.261 0.8868052962773812 54 AMTR_s00061p00087560 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor evm_27.TU.AmTr_v1.0_scaffold00061.63 0.886708241079221 55 AMTR_s00021p00196260 evm_27.TU.AmTr_v1.0_scaffold00021.159 0.8856726654078948 68 AMTR_s00021p00236970 Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.242 0.8847298788511955 57 AMTR_s00106p00063870 evm_27.TU.AmTr_v1.0_scaffold00106.40 0.8841620450308062 67 AMTR_s00002p00194810 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component evm_27.TU.AmTr_v1.0_scaffold00002.176 0.8841524842694262 83 AMTR_s00002p00252090 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial OS=Arabidopsis thaliana 0.8827951950295605 63 AMTR_s00028p00187760 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein evm_27.TU.AmTr_v1.0_scaffold00028.80 0.8827773693286977 64 AMTR_s00148p00046020 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor evm_27.TU.AmTr_v1.0_scaffold00148.24 0.8819114426032192 65 AMTR_s00057p00143260 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00057.128 0.8818414603419531 79 AMTR_s00163p00031970 evm_27.TU.AmTr_v1.0_scaffold00163.9 0.8808390269830262 71 AMTR_s00005p00168970 Carbohydrate metabolism.starch metabolism.degradation.phosphorylation.PWD phosphoglucan, water dikinase evm_27.TU.AmTr_v1.0_scaffold00005.53 0.8803745340182751 74 AMTR_s00163p00072710 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00163.29 0.8803047893469135 75 AMTR_s00011p00258380 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00011.182 0.8799155848170691 76 AMTR_s01569p00009850 Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold01569.1 0.8795573380296088 77 AMTR_s00224p00011500 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00224.3 0.8792074086627645 80 AMTR_s00009p00258320 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.carboxyltransferase alpha subunit evm_27.TU.AmTr_v1.0_scaffold00009.300 0.8789818152899942 82 AMTR_s00092p00052470 Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana 0.8785989475885745 83 AMTR_s00029p00159590 Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.192 0.8761815009570157 86 AMTR_s00039p00130050 Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.83 0.8755361830131613 89 AMTR_s00053p00090700 Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.47 0.8739284652488913 94 AMTR_s00010p00055110 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psPSRP3 component evm_27.TU.AmTr_v1.0_scaffold00010.27 0.8737494080821439 98 AMTR_s00040p00181990 Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00040.175 0.8730305572811472 96 AMTR_s00005p00203240 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component evm_27.TU.AmTr_v1.0_scaffold00005.80 0.8726537900038971 97 AMTR_s00147p00097570 Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00147.54 0.8726274695933534 98 AMTR_s00176p00057350 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase evm_27.TU.AmTr_v1.0_scaffold00176.30 0.8725757614910213 99