Sequence Description Alias PCC hrr AMTR_s00066p00041260 Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.18 0.9750566571816593 1 AMTR_s00101p00142180 evm_27.TU.AmTr_v1.0_scaffold00101.118 0.9599334963249155 3 AMTR_s00057p00019730 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP5 component evm_27.TU.AmTr_v1.0_scaffold00057.4 0.957693154875903 3 AMTR_s00025p00188660 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.helicase (SEN1) evm_27.TU.AmTr_v1.0_scaffold00025.230 0.9576766376086295 4 AMTR_s00154p00074010 evm_27.TU.AmTr_v1.0_scaffold00154.49 0.9557200637442586 6 AMTR_s00003p00241010 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase evm_27.TU.AmTr_v1.0_scaffold00003.257 0.9550375138653653 6 AMTR_s00044p00098420 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00044.69 0.9548049102518806 7 AMTR_s00001p00258830 Protein degradation.peptidase families.cysteine-type peptidase activities.AESP caspase-related protease separase evm_27.TU.AmTr_v1.0_scaffold00001.362 0.9547113049423214 8 AMTR_s00119p00078800 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.NUP214 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00119.58 0.9531643750277106 9 AMTR_s00165p00033420 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00165.18 0.95260095974783 10 AMTR_s00004p00115360 DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.98 0.9519188635262635 11 AMTR_s00095p00045160 Protein unc-13 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.22 0.950607986432987 12 AMTR_s00039p00148640 Cell cycle.cytokinesis.preprophase microtubule organization.CLASP microtubule orientation regulator evm_27.TU.AmTr_v1.0_scaffold00039.100 0.9503901275497154 13 AMTR_s00025p00140350 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00025.148 0.9485991596716882 14 AMTR_s00061p00214600 Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.269 0.948548763083965 15 AMTR_s00042p00115230 DNA damage response.DNA repair mechanisms.photoreactivation.6-4-type photolyase (UVR3) evm_27.TU.AmTr_v1.0_scaffold00042.26 0.947104335695848 16 AMTR_s00010p00223040 COP1-interactive protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.243 0.9468864101093409 17 AMTR_s00033p00224700 BEACH domain-containing protein B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.211 0.9446775389001146 18 AMTR_s00039p00125380 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor evm_27.TU.AmTr_v1.0_scaffold00039.79 0.9429553612715801 24 AMTR_s00056p00136660 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.transfer phase.MMS19 component evm_27.TU.AmTr_v1.0_scaffold00056.109 0.9413416513161601 20 AMTR_s00033p00150780 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.97 0.94060195586219 21 AMTR_s00041p00037520 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF160/Yhh1 component evm_27.TU.AmTr_v1.0_scaffold00041.17 0.9398831229770113 22 AMTR_s00025p00142780 Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00025.155 0.9398657753895576 23 AMTR_s00041p00138020 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP160 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00041.97 0.9391432186477316 24 AMTR_s00048p00073770 evm_27.TU.AmTr_v1.0_scaffold00048.33 0.9382747666591462 25 AMTR_s00029p00027850 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class VIII myosin evm_27.TU.AmTr_v1.0_scaffold00029.10 0.9382569758406109 26 AMTR_s00050p00215890 evm_27.TU.AmTr_v1.0_scaffold00050.82 0.9358173556351752 27 AMTR_s00059p00171720 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00059.168 0.9357966750209741 28 AMTR_s00106p00098180 evm_27.TU.AmTr_v1.0_scaffold00106.68 0.9355384452276437 29 AMTR_s00085p00139780 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.MORC-type auxilary factor evm_27.TU.AmTr_v1.0_scaffold00085.89 0.9348199132027367 36 AMTR_s00020p00038010 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00020.9 0.9347219405611145 56 AMTR_s00003p00263110 Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana 0.9339358922410977 32 AMTR_s00009p00253500 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00009.266 0.9334918161496224 33 AMTR_s00058p00171240 evm_27.TU.AmTr_v1.0_scaffold00058.156 0.9331672257515653 34 AMTR_s00048p00132040 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.77 0.9321844016967866 35 AMTR_s00106p00107190 evm_27.TU.AmTr_v1.0_scaffold00106.78 0.9319846670339303 36 AMTR_s00017p00192140 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00017.112 0.9318268715870502 48 AMTR_s00034p00133850 evm_27.TU.AmTr_v1.0_scaffold00034.40 0.9317656108308677 38 AMTR_s00057p00139000 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00057.123 0.9314524522561 39 AMTR_s00057p00157250 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-14 motor protein evm_27.TU.AmTr_v1.0_scaffold00057.145 0.9311700110448787 40 AMTR_s00019p00219410 evm_27.TU.AmTr_v1.0_scaffold00019.273 0.9305086872218999 41 AMTR_s00049p00115800 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00049.91 0.9303223405381936 58 AMTR_s00002p00198580 Uncharacterized protein At4g17910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.186 0.9302314110154989 43 AMTR_s00014p00034060 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00014.10 0.9302100270261235 44 AMTR_s00002p00132230 SH2 domain-containing protein B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.92 0.9300940184729685 45 AMTR_s00067p00142170 Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate synthase evm_27.TU.AmTr_v1.0_scaffold00067.132 0.9298559504692857 46 AMTR_s00023p00231440 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00023.187 0.9295730428566336 47 AMTR_s00119p00132020 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class IV ARF-GAP protein evm_27.TU.AmTr_v1.0_scaffold00119.107 0.9294584992357291 48 AMTR_s00055p00041510 Histidine kinase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.12 0.9293356894261378 60 AMTR_s00010p00249970 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor evm_27.TU.AmTr_v1.0_scaffold00010.349 0.929325004220573 50 AMTR_s00110p00154620 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.130 0.9292224590133566 51 AMTR_s00001p00219300 Cytoskeleton.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-II formin evm_27.TU.AmTr_v1.0_scaffold00001.227 0.9291396950267309 52 AMTR_s00033p00195130 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00033.156 0.92814478177115 54 AMTR_s00007p00031450 evm_27.TU.AmTr_v1.0_scaffold00007.11 0.928037867726129 55 AMTR_s00032p00163130 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VIII kinase families.LRR-VIII-2 kinase evm_27.TU.AmTr_v1.0_scaffold00032.136 0.9277991529100907 56 AMTR_s00025p00148960 Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.167 0.9271123837103565 57 AMTR_s00048p00224070 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.other.MED34 component evm_27.TU.AmTr_v1.0_scaffold00048.212 0.9271111341024852 58 AMTR_s00050p00221590 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00050.87 0.9269356613171011 59 AMTR_s00099p00131860 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component evm_27.TU.AmTr_v1.0_scaffold00099.119 0.9267091581774628 60 AMTR_s00009p00266540 Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00009.396 0.9263358808973109 61 AMTR_s00111p00141410 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component evm_27.TU.AmTr_v1.0_scaffold00111.121 0.9263126633557761 62 AMTR_s00074p00162130 Lipid metabolism.lipid A synthesis.LpxB lipid-A-disaccharide synthase evm_27.TU.AmTr_v1.0_scaffold00074.77 0.9259122276497784 64 AMTR_s00026p00236160 evm_27.TU.AmTr_v1.0_scaffold00026.132 0.9258936768867562 65 AMTR_s00032p00046150 evm_27.TU.AmTr_v1.0_scaffold00032.25 0.9255560201290033 66 AMTR_s00106p00104330 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group evm_27.TU.AmTr_v1.0_scaffold00106.74 0.9250271257768027 67 AMTR_s00169p00027470 Cell cycle.interphase.DNA replication.telomere replication.telomere integrity maintenance complex.CTC1 component evm_27.TU.AmTr_v1.0_scaffold00169.14 0.9247655082568229 68 AMTR_s00049p00191680 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.GP210 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00049.202 0.9236217542132108 69 AMTR_s00146p00080830 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00146.48 0.9235541423450616 93 AMTR_s00036p00207520 Solute transport.channels.Ca-ClC-type calcium-dependent anion channel evm_27.TU.AmTr_v1.0_scaffold00036.125 0.9233556988266786 71 AMTR_s00006p00249990 evm_27.TU.AmTr_v1.0_scaffold00006.146 0.921501199672202 74 AMTR_s00068p00160530 evm_27.TU.AmTr_v1.0_scaffold00068.112 0.9209700970826885 75 AMTR_s00078p00195340 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.203 0.9208811533257526 76 AMTR_s00021p00026070 evm_27.TU.AmTr_v1.0_scaffold00021.7 0.9206417315721493 78 AMTR_s00007p00088050 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component evm_27.TU.AmTr_v1.0_scaffold00007.52 0.9205669030326241 79 AMTR_s00119p00135690 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit A evm_27.TU.AmTr_v1.0_scaffold00119.113 0.9202254348895912 80 AMTR_s00004p00143390 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00004.140 0.9201061215768087 81 AMTR_s00086p00094500 Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00086.48 0.9196745635086354 82 AMTR_s00085p00125280 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00085.80 0.919619312529292 83 AMTR_s00110p00099550 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.61 0.9195659078461037 84 AMTR_s00099p00030730 Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.16 0.9193985413280328 85 AMTR_s00061p00182640 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00061.204 0.9193213058683947 86 AMTR_s00047p00125370 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease evm_27.TU.AmTr_v1.0_scaffold00047.50 0.9191740102262247 87 AMTR_s00063p00135060 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00063.31 0.9178301044069618 88 AMTR_s00071p00058700 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.33 0.917576407462049 89 AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) evm_27.TU.AmTr_v1.0_scaffold00009.114 0.9169375436937258 90 AMTR_s00019p00242260 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC1/Tau95 component evm_27.TU.AmTr_v1.0_scaffold00019.356 0.9166482685020374 91 AMTR_s00016p00133200 evm_27.TU.AmTr_v1.0_scaffold00016.91 0.9165801518419538 92 AMTR_s00133p00115730 Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.60 0.9164227327233954 93 AMTR_s00022p00248380 Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.375 0.9153481274278455 96 AMTR_s00057p00072880 evm_27.TU.AmTr_v1.0_scaffold00057.43 0.9152231385074335 97 AMTR_s00007p00240820 evm_27.TU.AmTr_v1.0_scaffold00007.253 0.9151590540138929 98 AMTR_s00013p00258230 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component evm_27.TU.AmTr_v1.0_scaffold00013.257 0.9144966499884544 99 AMTR_s00009p00265450 MLO-like protein 14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.382 0.9143997273639226 100