Sequence Description Alias PCC hrr AMTR_s00019p00256050 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3c component evm_27.TU.AmTr_v1.0_scaffold00019.448 0.9168993132724167 4 AMTR_s00048p00020720 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC10 component evm_27.TU.AmTr_v1.0_scaffold00048.3 0.8979296852172385 12 AMTR_s00002p00263460 Flowering locus K homology domain OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.479 0.894508609962773 7 AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.8932645433707854 36 AMTR_s00089p00089760 evm_27.TU.AmTr_v1.0_scaffold00089.47 0.8928721158552575 9 AMTR_s00001p00273090 Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.593 0.891444494806912 10 AMTR_s00023p00015970 RNA biosynthesis.transcriptional activation.FAR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00023.4 0.8900635060805153 17 AMTR_s00016p00145050 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT4 delta subunit evm_27.TU.AmTr_v1.0_scaffold00016.100 0.888792373734708 20 AMTR_s00171p00048400 Cellular respiration.glycolysis.cytosolic glycolysis.pyruvate kinase evm_27.TU.AmTr_v1.0_scaffold00171.30 0.8871536241271399 9 AMTR_s00048p00075850 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor evm_27.TU.AmTr_v1.0_scaffold00048.34 0.8869844616691751 19 AMTR_s00023p00210090 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.fungal elicitor response.PBL27/RLCK185 kinase evm_27.TU.AmTr_v1.0_scaffold00023.153 0.8834809533631293 36 AMTR_s00089p00034850 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00089.9 0.8814842217502479 63 AMTR_s00025p00131080 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component evm_27.TU.AmTr_v1.0_scaffold00025.129 0.8812177008334495 13 AMTR_s00028p00246730 Protein modification.phosphorylation.TKL kinase superfamily.LRR-X kinase families.LRR-Xa kinase evm_27.TU.AmTr_v1.0_scaffold00028.142 0.879516384337751 14 AMTR_s00069p00195010 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00069.205 0.8777677618493166 15 AMTR_s00032p00133570 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor evm_27.TU.AmTr_v1.0_scaffold00032.93 0.8772256028082068 16 AMTR_s00065p00140150 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP4/PCN assembly factor evm_27.TU.AmTr_v1.0_scaffold00065.96 0.8747409701144653 50 AMTR_s00038p00238890 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component evm_27.TU.AmTr_v1.0_scaffold00038.246 0.8724307719495091 18 AMTR_s00003p00257690 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TPLATE component evm_27.TU.AmTr_v1.0_scaffold00003.321 0.8718352351865617 19 AMTR_s00013p00226180 UPF0235 protein At5g63440 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00013.170 0.8706420746449823 20 AMTR_s00071p00150630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.RNPS1 component evm_27.TU.AmTr_v1.0_scaffold00071.136 0.8705819526396009 25 AMTR_s00002p00202190 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Sof1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00002.192 0.8701785884140363 22 AMTR_s00179p00011640 evm_27.TU.AmTr_v1.0_scaffold00179.1 0.8700536466872077 33 AMTR_s00024p00180690 Splicing factor-like protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.141 0.8686020970330843 55 AMTR_s00101p00119280 Protein FLX-like 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.92 0.8668192275014397 25 AMTR_s00082p00169320 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00082.40 0.8667481687157919 63 AMTR_s00069p00127620 evm_27.TU.AmTr_v1.0_scaffold00069.88 0.8666617456965301 84 AMTR_s00002p00269760 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.558 0.8660502234907123 45 AMTR_s00046p00228720 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.DnaK protein evm_27.TU.AmTr_v1.0_scaffold00046.170 0.8640719344274981 39 AMTR_s00111p00143660 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.124 0.8620998983131964 40 AMTR_s00142p00058560 Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00142.32 0.8619218052787754 65 AMTR_s00036p00181640 Protein biosynthesis.translation initiation.mRNA loading.eIF4A mRNA unwinding factor evm_27.TU.AmTr_v1.0_scaffold00036.91 0.8617054385899995 33 AMTR_s00001p00116440 evm_27.TU.AmTr_v1.0_scaffold00001.84 0.8615323949157012 34 AMTR_s00003p00196050 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI8 component evm_27.TU.AmTr_v1.0_scaffold00003.177 0.8613384998983371 35 AMTR_s00046p00133890 evm_27.TU.AmTr_v1.0_scaffold00046.67 0.860992226748749 36 AMTR_s00004p00109230 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-B component evm_27.TU.AmTr_v1.0_scaffold00004.87 0.8608253660690499 37 AMTR_s00011p00224870 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.carbonic anhydrase component evm_27.TU.AmTr_v1.0_scaffold00011.101 0.8598778519048592 38 AMTR_s00045p00049310 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone evm_27.TU.AmTr_v1.0_scaffold00045.31 0.8594041629850954 39 AMTR_s00001p00272450 evm_27.TU.AmTr_v1.0_scaffold00001.529 0.857313786403406 41 AMTR_s00004p00270830 RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YC component evm_27.TU.AmTr_v1.0_scaffold00004.302 0.8572267545428981 42 AMTR_s00153p00050640 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.22 0.8563082803877635 43 AMTR_s00002p00165660 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase regulatory protein evm_27.TU.AmTr_v1.0_scaffold00002.139 0.854874380785489 44 AMTR_s00001p00220200 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00001.228 0.854728850092891 67 AMTR_s00105p00023120 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL4 component evm_27.TU.AmTr_v1.0_scaffold00105.4 0.8545532210979695 47 AMTR_s00099p00081960 Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.60 0.8543785332084722 48 AMTR_s00153p00076780 evm_27.TU.AmTr_v1.0_scaffold00153.40 0.8543053631152714 49 AMTR_s00109p00118420 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG1/NSN1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00109.117 0.8534347610492728 50 AMTR_s00133p00101570 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.46 0.8534093842551613 67 AMTR_s00032p00242160 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP5/RTF1 component evm_27.TU.AmTr_v1.0_scaffold00032.281 0.8523963292624315 52 AMTR_s00101p00033020 UBP1-associated protein 2A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.8 0.8500062599296156 54 AMTR_s00038p00121420 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) evm_27.TU.AmTr_v1.0_scaffold00038.67 0.8498003051904123 88 AMTR_s00176p00038570 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A2 component evm_27.TU.AmTr_v1.0_scaffold00176.14 0.8476953204902432 56 AMTR_s00013p00196470 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00013.128 0.8472931114215255 57 AMTR_s00128p00027720 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00128.7 0.8470301695462021 58 AMTR_s00105p00058690 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RACK1 associated component evm_27.TU.AmTr_v1.0_scaffold00105.26 0.8463389335245477 60 AMTR_s00032p00220250 evm_27.TU.AmTr_v1.0_scaffold00032.225 0.8460079948901418 62 AMTR_s00025p00085190 Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.66 0.8452363700871474 64 AMTR_s00099p00093470 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00099.70 0.8451760811132248 65 AMTR_s00004p00210450 Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).succinate formation.NAD-dependent succinic semialdehyde dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00004.212 0.8450848599246232 66 AMTR_s00072p00034700 Universal stress protein PHOS32 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.7 0.8446831761777452 67 AMTR_s00148p00030810 Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00148.13 0.8444825879813003 69 AMTR_s00055p00026270 evm_27.TU.AmTr_v1.0_scaffold00055.7 0.844351900284121 70 AMTR_s00088p00141580 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type evm_27.TU.AmTr_v1.0_scaffold00088.108 0.8429211831433001 71 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.8411122632319554 73 AMTR_s00155p00079840 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF30/Yth1 component evm_27.TU.AmTr_v1.0_scaffold00155.52 0.8408277734997407 77 AMTR_s00153p00065050 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBA-activating E1 protein evm_27.TU.AmTr_v1.0_scaffold00153.31 0.8391912715646053 77 AMTR_s00022p00096260 UPF0496 protein At3g19330 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.76 0.8390263642674629 78 AMTR_s00069p00109170 Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.71 0.8388175462708053 80 AMTR_s00061p00165040 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF6/PRP1/STA1 protein component evm_27.TU.AmTr_v1.0_scaffold00061.166 0.8371018555534279 81 AMTR_s00001p00152770 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 evm_27.TU.AmTr_v1.0_scaffold00001.137 0.8369934439743797 99 AMTR_s00001p00269200 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase evm_27.TU.AmTr_v1.0_scaffold00001.433 0.8365969831733893 83 AMTR_s00001p00026840 Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.11 0.8360221244922221 84 AMTR_s00058p00150340 Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.118 0.8340519454402229 86 AMTR_s00084p00172980 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.FREE1 associated protein evm_27.TU.AmTr_v1.0_scaffold00084.46 0.8332377648855247 87 AMTR_s00025p00215680 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00025.292 0.8287330225406981 91 AMTR_s00001p00270600 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00001.466 0.8269872524949621 94 AMTR_s00027p00237390 RNA biosynthesis.transcriptional activation.TUB transcription factor evm_27.TU.AmTr_v1.0_scaffold00027.130 0.8267666513662651 95 AMTR_s00073p00163500 evm_27.TU.AmTr_v1.0_scaffold00073.47 0.8237984690773309 98