Sequence Description Alias PCC hrr AMTR_s00019p00202640 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00019.237 0.931078442893344 2 AMTR_s00029p00224040 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component evm_27.TU.AmTr_v1.0_scaffold00029.346 0.9292855878905844 3 AMTR_s00056p00107780 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00056.81 0.9292256348185467 3 AMTR_s00101p00090190 NAP1-related protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.66 0.9214436561741952 4 AMTR_s00021p00206430 evm_27.TU.AmTr_v1.0_scaffold00021.176 0.9203032466193042 5 AMTR_s00019p00040900 evm_27.TU.AmTr_v1.0_scaffold00019.21 0.9169402945593346 6 AMTR_s00071p00022960 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.Sdo1 maturation factor evm_27.TU.AmTr_v1.0_scaffold00071.10 0.9137860989053647 7 AMTR_s00061p00187310 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00061.212 0.9105017116392695 11 AMTR_s00022p00202910 CDK5RAP3-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.238 0.9100445383495132 9 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor evm_27.TU.AmTr_v1.0_scaffold00101.112 0.9069152185624664 19 AMTR_s00087p00135370 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component evm_27.TU.AmTr_v1.0_scaffold00087.43 0.901031982415038 15 AMTR_s00023p00202890 evm_27.TU.AmTr_v1.0_scaffold00023.143 0.8989301948844514 12 AMTR_s00011p00243170 Transcription factor GTE6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.139 0.898504870534057 23 AMTR_s00067p00044400 evm_27.TU.AmTr_v1.0_scaffold00067.24 0.8965792350244218 14 AMTR_s00012p00265130 Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.368 0.8960200852358969 15 AMTR_s00049p00212710 Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.244 0.8951729186045673 16 AMTR_s00020p00233960 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component evm_27.TU.AmTr_v1.0_scaffold00020.105 0.8945495820153491 24 AMTR_s00016p00065680 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIf basal transcription factor complex.small subunit evm_27.TU.AmTr_v1.0_scaffold00016.31 0.8936818455180118 18 AMTR_s00010p00163740 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component evm_27.TU.AmTr_v1.0_scaffold00010.126 0.8932916505737867 26 AMTR_s00009p00264850 Monothiol glutaredoxin-S17 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.377 0.8928154056377295 20 AMTR_s00001p00270140 Oligoribonuclease OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.458 0.8906880229482985 21 AMTR_s00030p00185140 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00030.118 0.8896152289004708 22 AMTR_s00007p00199530 Alpha-soluble NSF attachment protein OS=Vitis vinifera evm_27.TU.AmTr_v1.0_scaffold00007.173 0.8880447768321211 23 AMTR_s00006p00263680 Plant cysteine oxidase 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.253 0.887403611268313 24 AMTR_s00007p00199090 evm_27.TU.AmTr_v1.0_scaffold00007.172 0.8864259880929188 29 AMTR_s00067p00163830 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.MRG histone H3K4/H3K36 methylation reader evm_27.TU.AmTr_v1.0_scaffold00067.165 0.8861561419987901 26 AMTR_s00106p00102120 Chaperone protein dnaJ 13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00106.72 0.8853837803481405 27 AMTR_s00006p00083160 evm_27.TU.AmTr_v1.0_scaffold00006.30 0.885328648471626 28 AMTR_s00053p00166720 evm_27.TU.AmTr_v1.0_scaffold00053.113 0.8839239315867409 29 AMTR_s00087p00094770 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.ArpC4 component evm_27.TU.AmTr_v1.0_scaffold00087.31 0.8833573967862058 30 AMTR_s00021p00243200 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component evm_27.TU.AmTr_v1.0_scaffold00021.258 0.8823116005747741 31 AMTR_s00053p00199490 RNA processing.RNA 5-end cap adding.mRNA cap methyltransferase evm_27.TU.AmTr_v1.0_scaffold00053.152 0.8813332579977377 32 AMTR_s00067p00130250 Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.112 0.8808733825156876 33 AMTR_s00070p00058800 evm_27.TU.AmTr_v1.0_scaffold00070.25 0.8808598262062929 34 AMTR_s00103p00136100 evm_27.TU.AmTr_v1.0_scaffold00103.88 0.8804743930914072 35 AMTR_s00025p00026830 evm_27.TU.AmTr_v1.0_scaffold00025.11 0.8793413092314258 36 AMTR_s00052p00172760 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component evm_27.TU.AmTr_v1.0_scaffold00052.82 0.8789004285754793 99 AMTR_s00114p00074070 evm_27.TU.AmTr_v1.0_scaffold00114.24 0.8783571892841601 38 AMTR_s00014p00247240 evm_27.TU.AmTr_v1.0_scaffold00014.121 0.8773395606008042 39 AMTR_s00009p00255020 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase evm_27.TU.AmTr_v1.0_scaffold00009.276 0.8771755332216533 40 AMTR_s00039p00198940 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL24 component evm_27.TU.AmTr_v1.0_scaffold00039.163 0.8769836186320217 41 AMTR_s00009p00255220 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class theta evm_27.TU.AmTr_v1.0_scaffold00009.278 0.8768000245378353 42 AMTR_s00041p00173130 Multi-process regulation.circadian clock.FIO1 circadian clock regulator evm_27.TU.AmTr_v1.0_scaffold00041.129 0.8752070574379675 58 AMTR_s00129p00037970 RNA biosynthesis.rRNA biogenesis.APUM23 factor evm_27.TU.AmTr_v1.0_scaffold00129.17 0.8750652110024727 44 AMTR_s00014p00255630 Chaperone protein dnaJ 10 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00014.145 0.8749574070522198 45 AMTR_s00002p00272060 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm8 component evm_27.TU.AmTr_v1.0_scaffold00002.659 0.8742342014657754 47 AMTR_s00062p00203310 Protein modification.disulfide bond formation.endoplasmic reticulum.protein disulfide isomerase (PDI8) evm_27.TU.AmTr_v1.0_scaffold00062.215 0.8741588111431368 48 AMTR_s00122p00131800 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase evm_27.TU.AmTr_v1.0_scaffold00122.69 0.8725785664306567 49 AMTR_s00007p00253380 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN2/QQT1 nuclear import factor evm_27.TU.AmTr_v1.0_scaffold00007.293 0.871893308333186 50 AMTR_s00012p00240300 evm_27.TU.AmTr_v1.0_scaffold00012.213 0.8715677872326306 51 AMTR_s00125p00104110 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.Hsp40 Hsp70-co-chaperone evm_27.TU.AmTr_v1.0_scaffold00125.25 0.8696986378466974 52 AMTR_s00062p00097510 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-4 component evm_27.TU.AmTr_v1.0_scaffold00062.71 0.8681041515069413 55 AMTR_s00064p00153650 evm_27.TU.AmTr_v1.0_scaffold00064.63 0.8673125647203423 57 AMTR_s00059p00025420 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-3 Golgi to vacuole cargo adaptor complex.AP3S small sigma subunit evm_27.TU.AmTr_v1.0_scaffold00059.10 0.8672040486245877 58 AMTR_s00009p00256060 evm_27.TU.AmTr_v1.0_scaffold00009.284 0.866917842997677 78 AMTR_s00061p00211510 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00061.262 0.8668168352924062 60 AMTR_s00058p00112040 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.65 0.8658227213238971 64 AMTR_s00010p00083470 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00010.46 0.8644471372664683 62 AMTR_s00041p00081370 evm_27.TU.AmTr_v1.0_scaffold00041.48 0.8635426808498253 64 AMTR_s00041p00194980 DNA damage response.BRCC DNA-damage response complex.BRCC45 component evm_27.TU.AmTr_v1.0_scaffold00041.172 0.8618171419180071 65 AMTR_s00010p00244300 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.320 0.8616057013208442 66 AMTR_s00004p00077740 evm_27.TU.AmTr_v1.0_scaffold00004.60 0.861399936962883 67 AMTR_s00099p00158700 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class zeta evm_27.TU.AmTr_v1.0_scaffold00099.157 0.86060820459265 68 AMTR_s00033p00178090 Protein degradation.ER-associated protein degradation (ERAD) machinery.OS9 component evm_27.TU.AmTr_v1.0_scaffold00033.130 0.8602310256653405 70 AMTR_s00045p00111810 evm_27.TU.AmTr_v1.0_scaffold00045.108 0.8597462485949553 73 AMTR_s00009p00268610 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component evm_27.TU.AmTr_v1.0_scaffold00009.430 0.8595712080391719 74 AMTR_s00108p00150280 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.P58 Hsp70-co-chaperone evm_27.TU.AmTr_v1.0_scaffold00108.50 0.8593242716653916 99 AMTR_s00078p00083100 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component evm_27.TU.AmTr_v1.0_scaffold00078.56 0.8574607141287149 76 AMTR_s00146p00087440 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim50 component evm_27.TU.AmTr_v1.0_scaffold00146.55 0.8572994215008192 90 AMTR_s00046p00087940 evm_27.TU.AmTr_v1.0_scaffold00046.44 0.857264131519447 79 AMTR_s00025p00098730 evm_27.TU.AmTr_v1.0_scaffold00025.81 0.8571363614930995 80 AMTR_s00009p00218530 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS9 component evm_27.TU.AmTr_v1.0_scaffold00009.156 0.856145653630117 82 AMTR_s00009p00104670 evm_27.TU.AmTr_v1.0_scaffold00009.49 0.8556139029284245 83 AMTR_s00106p00025830 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3k component evm_27.TU.AmTr_v1.0_scaffold00106.7 0.8553471062671518 84 AMTR_s00066p00180460 evm_27.TU.AmTr_v1.0_scaffold00066.222 0.8553234142381749 85 AMTR_s00071p00094030 evm_27.TU.AmTr_v1.0_scaffold00071.69 0.8549592014054807 86 AMTR_s00053p00155220 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor evm_27.TU.AmTr_v1.0_scaffold00053.103 0.8545919157381622 87 AMTR_s00049p00059500 Protein degradation.ER-associated protein degradation (ERAD) machinery.PUX1 ubiquitin-regulatory component evm_27.TU.AmTr_v1.0_scaffold00049.34 0.8538413335459468 88 AMTR_s00051p00095080 Cactin OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00051.40 0.8535772540246566 90 AMTR_s00053p00084490 evm_27.TU.AmTr_v1.0_scaffold00053.42 0.8534951236890308 91 AMTR_s00007p00085450 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00007.50 0.8534625434584535 92 AMTR_s00049p00209260 evm_27.TU.AmTr_v1.0_scaffold00049.231 0.8519350133328824 94 AMTR_s00048p00227650 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00048.220 0.8519174500967088 95 AMTR_s00024p00074730 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecE2 component evm_27.TU.AmTr_v1.0_scaffold00024.33 0.8518415957066208 96 AMTR_s00077p00035710 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component evm_27.TU.AmTr_v1.0_scaffold00077.17 0.8516762102348682 97 AMTR_s00077p00043830 Redox homeostasis.enzymatic reactive oxygen species scavengers.superoxide dismutase activities.manganese superoxide dismutase evm_27.TU.AmTr_v1.0_scaffold00077.26 0.8509904002532337 98 AMTR_s00057p00181010 evm_27.TU.AmTr_v1.0_scaffold00057.191 0.8509322315074042 99 AMTR_s00023p00222750 Cell cycle.cytokinesis.preprophase microtubule organization.TON1-TRM-PP2A (TTP) preprophase band formation complex.TON1 component evm_27.TU.AmTr_v1.0_scaffold00023.166 0.8506814133638487 100