Sequence Description Alias PCC hrr AMTR_s00048p00222810 evm_27.TU.AmTr_v1.0_scaffold00048.208 0.9620767964061532 1 AMTR_s00001p00220750 evm_27.TU.AmTr_v1.0_scaffold00001.229 0.9572762808421927 2 AMTR_s00052p00157970 evm_27.TU.AmTr_v1.0_scaffold00052.66 0.9465096671946017 3 AMTR_s00062p00065360 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LCNP NPQ-regulator lipocalin evm_27.TU.AmTr_v1.0_scaffold00062.38 0.9456620275866053 4 AMTR_s00012p00251230 evm_27.TU.AmTr_v1.0_scaffold00012.252 0.9433961378503946 5 AMTR_s00046p00014960 Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.2 0.9376675279912351 6 AMTR_s00010p00259870 evm_27.TU.AmTr_v1.0_scaffold00010.430 0.9331184830471217 10 AMTR_s00131p00066980 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea evm_27.TU.AmTr_v1.0_scaffold00131.39 0.9323580853176255 8 AMTR_s00078p00106750 Phytohormones.salicylic acid.synthesis.isochorismate synthase evm_27.TU.AmTr_v1.0_scaffold00078.78 0.9272523479076071 9 AMTR_s00024p00252900 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor evm_27.TU.AmTr_v1.0_scaffold00024.352 0.9189548124128971 10 AMTR_s00029p00240470 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.410 0.9184745430741013 15 AMTR_s00015p00257490 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR membrane-tethering.TROL protein evm_27.TU.AmTr_v1.0_scaffold00015.112 0.9181010513600648 12 AMTR_s00006p00260480 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein evm_27.TU.AmTr_v1.0_scaffold00006.222 0.9176494139255426 14 AMTR_s00022p00249930 evm_27.TU.AmTr_v1.0_scaffold00022.381 0.9159824467336992 31 AMTR_s00013p00233820 evm_27.TU.AmTr_v1.0_scaffold00013.185 0.9147133675868737 15 AMTR_s00145p00079180 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL1 component evm_27.TU.AmTr_v1.0_scaffold00145.28 0.9140090659163204 16 AMTR_s00081p00136350 Protein biosynthesis.organelle translation machineries.peptide deformylation.PDF formylmethionine deformylase evm_27.TU.AmTr_v1.0_scaffold00081.52 0.9131648751171787 25 AMTR_s00008p00202090 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00008.120 0.9128709388875262 18 AMTR_s00038p00234220 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.234 0.9117230611885284 19 AMTR_s00025p00248100 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.402 0.9107813571078979 20 AMTR_s00065p00038950 evm_27.TU.AmTr_v1.0_scaffold00065.17 0.9087773684353295 31 AMTR_s00039p00213540 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psPSRP5 component evm_27.TU.AmTr_v1.0_scaffold00039.184 0.907929791268411 22 AMTR_s00058p00167600 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00058.152 0.9068230631322243 27 AMTR_s00061p00050140 evm_27.TU.AmTr_v1.0_scaffold00061.26 0.9062736936023598 24 AMTR_s00103p00070570 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor evm_27.TU.AmTr_v1.0_scaffold00103.36 0.9060618365906721 25 AMTR_s00003p00270950 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR9 evm_27.TU.AmTr_v1.0_scaffold00003.446 0.905714922542744 26 AMTR_s00047p00095590 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00047.38 0.9055744253360436 32 AMTR_s00010p00237980 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00010.293 0.9053204191219449 75 AMTR_s00010p00141760 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.dehydroascorbate reductase (DHAR) evm_27.TU.AmTr_v1.0_scaffold00010.104 0.902607023903503 29 AMTR_s00061p00169610 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00061.177 0.9023445147309591 30 AMTR_s00106p00046740 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00106.25 0.9022017990921692 49 AMTR_s00061p00142700 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00061.123 0.9014128631438577 32 AMTR_s00071p00199450 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter evm_27.TU.AmTr_v1.0_scaffold00071.217 0.8983226784271455 75 AMTR_s00092p00157010 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.132 0.8980201730972922 34 AMTR_s00048p00223180 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00048.210 0.897202909683949 49 AMTR_s00043p00168880 BTB/POZ domain-containing protein At3g22104 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00043.37 0.8956975516432872 36 AMTR_s00010p00259680 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00010.427 0.8947578641352435 37 AMTR_s00002p00197820 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.183 0.8947135520546445 40 AMTR_s00069p00149060 evm_27.TU.AmTr_v1.0_scaffold00069.116 0.8941312915551294 39 AMTR_s00216p00022320 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphtoate-phytyltransferase evm_27.TU.AmTr_v1.0_scaffold00216.3 0.894058034549157 40 AMTR_s00075p00091010 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase evm_27.TU.AmTr_v1.0_scaffold00075.28 0.8939161031793528 41 AMTR_s00057p00165960 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase evm_27.TU.AmTr_v1.0_scaffold00057.167 0.8923335335446178 42 AMTR_s00120p00054610 evm_27.TU.AmTr_v1.0_scaffold00120.17 0.8923271480252897 46 AMTR_s00044p00085200 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.57 0.8905119641318295 44 AMTR_s00133p00054340 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.19 0.8905077976429584 45 AMTR_s00023p00232870 Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.190 0.8898416282524995 67 AMTR_s00022p00127120 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.118 0.8895705243515006 51 AMTR_s00011p00266100 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00011.228 0.8891909007385048 73 AMTR_s00057p00162170 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.151 0.8891067680838244 54 AMTR_s00044p00116170 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00044.90 0.8887101994969938 50 AMTR_s00046p00214930 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.141 0.8882593761333746 63 AMTR_s00010p00055110 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psPSRP3 component evm_27.TU.AmTr_v1.0_scaffold00010.27 0.887842334341264 61 AMTR_s00007p00156370 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG evm_27.TU.AmTr_v1.0_scaffold00007.117 0.8877873700510789 62 AMTR_s00171p00047960 evm_27.TU.AmTr_v1.0_scaffold00171.29 0.8875948344952685 54 AMTR_s00024p00130820 evm_27.TU.AmTr_v1.0_scaffold00024.77 0.886835370935293 62 AMTR_s00057p00193080 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor evm_27.TU.AmTr_v1.0_scaffold00057.217 0.8865461099144505 80 AMTR_s00036p00206170 evm_27.TU.AmTr_v1.0_scaffold00036.123 0.8862097930467552 70 AMTR_s00059p00156080 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component evm_27.TU.AmTr_v1.0_scaffold00059.142 0.8855345631656735 85 AMTR_s00019p00236430 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.NFU1/2/3 component evm_27.TU.AmTr_v1.0_scaffold00019.332 0.8845718006775689 61 AMTR_s00154p00066950 evm_27.TU.AmTr_v1.0_scaffold00154.45 0.8844516303192694 62 AMTR_s00025p00127130 evm_27.TU.AmTr_v1.0_scaffold00025.119 0.8817274381554526 64 AMTR_s00117p00058770 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.VDE violaxanthin de-epoxidase evm_27.TU.AmTr_v1.0_scaffold00117.15 0.8799176564951814 66 AMTR_s00065p00020910 Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.6 0.8797768561523899 66 AMTR_s00022p00222930 IRK-interacting protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.281 0.8786884121123049 67 AMTR_s00058p00193720 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.LSF phosphoglucan phosphatase evm_27.TU.AmTr_v1.0_scaffold00058.193 0.8777866354437395 82 AMTR_s00024p00220830 evm_27.TU.AmTr_v1.0_scaffold00024.217 0.8773957701824862 71 AMTR_s00059p00166490 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component evm_27.TU.AmTr_v1.0_scaffold00059.157 0.8772138569786018 73 AMTR_s00032p00109160 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase evm_27.TU.AmTr_v1.0_scaffold00032.70 0.8763503241221914 74 AMTR_s00057p00188930 GTP-binding protein OBGC, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.204 0.875929814093504 92 AMTR_s00058p00093170 evm_27.TU.AmTr_v1.0_scaffold00058.50 0.8752914280479807 87 AMTR_s00162p00065340 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VIII kinase families.LRR-VIII-2 kinase evm_27.TU.AmTr_v1.0_scaffold00162.29 0.872791499433614 84 AMTR_s00019p00227810 ACT domain-containing protein ACR11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.297 0.872704019017829 86 AMTR_s00055p00165940 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00055.86 0.8725231559667451 92 AMTR_s00066p00184560 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor evm_27.TU.AmTr_v1.0_scaffold00066.232 0.8721976616419774 88 AMTR_s00006p00258450 Coenzyme metabolism.phylloquinone synthesis.multifunctional phylloquinone synthesis protein (PHYLLO) evm_27.TU.AmTr_v1.0_scaffold00006.206 0.8707230390143609 93 AMTR_s00067p00038470 evm_27.TU.AmTr_v1.0_scaffold00067.21 0.8704428938369895 94 AMTR_s00012p00077460 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum evm_27.TU.AmTr_v1.0_scaffold00012.34 0.8692183440854035 96