Sequence Description Alias PCC hrr AMTR_s00019p00255470 Protein biosynthesis.translation elongation.eEF1B eEF1A-GDP-recycling complex.eEF1B-gamma component evm_27.TU.AmTr_v1.0_scaffold00019.442 0.9323130456017372 2 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase evm_27.TU.AmTr_v1.0_scaffold00057.19 0.9152539903035125 15 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9131999357782618 62 AMTR_s00006p00242820 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component evm_27.TU.AmTr_v1.0_scaffold00006.121 0.9131893953290224 55 AMTR_s00109p00071210 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3l component evm_27.TU.AmTr_v1.0_scaffold00109.55 0.912560075068068 67 AMTR_s00119p00124540 Protein translocation.mitochondrion.outer mitochondrion membrane TOM translocation system.Tom40 component evm_27.TU.AmTr_v1.0_scaffold00119.97 0.9118261464076876 6 AMTR_s00057p00205760 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component evm_27.TU.AmTr_v1.0_scaffold00057.246 0.9093306857100099 7 AMTR_s00020p00207770 evm_27.TU.AmTr_v1.0_scaffold00020.85 0.9092561780630012 32 AMTR_s00010p00245570 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED7 component evm_27.TU.AmTr_v1.0_scaffold00010.328 0.9077701494451414 9 AMTR_s00109p00121860 evm_27.TU.AmTr_v1.0_scaffold00109.121 0.9075346365178828 34 AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.9070390105423147 13 AMTR_s00089p00034850 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00089.9 0.9069259933473366 14 AMTR_s00078p00181940 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00078.179 0.9053325370216834 13 AMTR_s00034p00235670 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit B evm_27.TU.AmTr_v1.0_scaffold00034.119 0.9048879477051124 77 AMTR_s00068p00130970 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase evm_27.TU.AmTr_v1.0_scaffold00068.89 0.9041905926924422 55 AMTR_s00303p00010520 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00303.1 0.9040566215144427 16 AMTR_s00099p00018620 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component evm_27.TU.AmTr_v1.0_scaffold00099.5 0.903180763295345 46 AMTR_s00036p00239020 Chromatin organisation.histone modifications.histone arginine methylation.PRMT1 histone methylase evm_27.TU.AmTr_v1.0_scaffold00036.188 0.9023432597115375 22 AMTR_s00009p00206310 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00009.133 0.9010973845414555 38 AMTR_s00025p00100140 RNA biosynthesis.transcriptional activation.HUA2 transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.84 0.9008353982630444 20 AMTR_s00066p00084950 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.66 0.9008133855156799 77 AMTR_s00050p00189150 Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00050.51 0.9000925241010077 58 AMTR_s00001p00107630 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT7 eta subunit evm_27.TU.AmTr_v1.0_scaffold00001.74 0.8978967615808584 96 AMTR_s00040p00151890 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component evm_27.TU.AmTr_v1.0_scaffold00040.125 0.8976904918083619 24 AMTR_s00019p00154210 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor evm_27.TU.AmTr_v1.0_scaffold00019.143 0.8962304710420478 38 AMTR_s00059p00069290 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.gamma subunit evm_27.TU.AmTr_v1.0_scaffold00059.44 0.8955789971938427 27 AMTR_s00014p00250090 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit evm_27.TU.AmTr_v1.0_scaffold00014.130 0.8950521422802541 28 AMTR_s00046p00229090 evm_27.TU.AmTr_v1.0_scaffold00046.172 0.8944953956164513 40 AMTR_s00045p00223730 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein evm_27.TU.AmTr_v1.0_scaffold00045.315 0.8944193204028403 31 AMTR_s00011p00266440 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00011.230 0.8929908980314141 31 AMTR_s00092p00090110 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA chromatin transcription factor evm_27.TU.AmTr_v1.0_scaffold00092.50 0.8929182710731567 32 AMTR_s00051p00218610 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.PTEN lipid phosphatase evm_27.TU.AmTr_v1.0_scaffold00051.97 0.8918730186995556 33 AMTR_s00007p00259060 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.316 0.8917034308175213 73 AMTR_s00010p00016450 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit evm_27.TU.AmTr_v1.0_scaffold00010.5 0.8911058373386903 79 AMTR_s00062p00113470 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.93 0.8910795797893801 95 AMTR_s00001p00246890 evm_27.TU.AmTr_v1.0_scaffold00001.300 0.8909004004427437 38 AMTR_s00071p00070350 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00071.41 0.8907563661107734 100 AMTR_s00064p00050700 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).DDX5 pre-mRNA splicing regulator evm_27.TU.AmTr_v1.0_scaffold00064.11 0.889661606303899 63 AMTR_s00049p00071550 Cell division control protein 48 homolog C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.44 0.88958670554137 41 AMTR_s00021p00105410 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00021.53 0.8889708247651189 43 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component evm_27.TU.AmTr_v1.0_scaffold00012.260 0.8875342248546614 99 AMTR_s00002p00225030 DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.247 0.8855072387855069 48 AMTR_s00111p00056660 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor evm_27.TU.AmTr_v1.0_scaffold00111.28 0.8853641230616233 49 AMTR_s00057p00183920 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00057.196 0.8853058955487264 50 AMTR_s00049p00173980 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT5 epsilon subunit evm_27.TU.AmTr_v1.0_scaffold00049.162 0.8850029715301948 100 AMTR_s00059p00183080 Chromatin organisation.histone chaperone activities.NASP-type histone chaperone evm_27.TU.AmTr_v1.0_scaffold00059.197 0.8849341684417805 52 AMTR_s00004p00166400 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00004.183 0.884399031801212 79 AMTR_s00036p00225190 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component evm_27.TU.AmTr_v1.0_scaffold00036.165 0.8838509847060727 95 AMTR_s00064p00192980 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.beta subunit evm_27.TU.AmTr_v1.0_scaffold00064.89 0.8837348173187344 56 AMTR_s00091p00066640 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component evm_27.TU.AmTr_v1.0_scaffold00091.17 0.8835174715992558 57 AMTR_s00056p00180950 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00056.160 0.8830923865374714 59 AMTR_s00057p00212890 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component evm_27.TU.AmTr_v1.0_scaffold00057.266 0.8828779944294455 60 AMTR_s00021p00185830 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.145 0.8826629877407615 69 AMTR_s00082p00169320 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00082.40 0.8826618643084502 63 AMTR_s00146p00044900 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.threonine.threonine synthase evm_27.TU.AmTr_v1.0_scaffold00146.23 0.8816507461509014 65 AMTR_s00069p00132220 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RS31/40/41 splicing factor evm_27.TU.AmTr_v1.0_scaffold00069.94 0.879213050730877 66 AMTR_s00021p00236970 Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.242 0.8790605494960846 67 AMTR_s00109p00033810 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00109.22 0.8789970161332675 68 AMTR_s00046p00228720 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.DnaK protein evm_27.TU.AmTr_v1.0_scaffold00046.170 0.878866791259413 69 AMTR_s00173p00020990 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00173.4 0.8778939930759201 72 AMTR_s00059p00117370 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B4 component evm_27.TU.AmTr_v1.0_scaffold00059.91 0.8777361355102765 73 AMTR_s00032p00058660 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00032.37 0.8776072353850862 74 AMTR_s00029p00146380 evm_27.TU.AmTr_v1.0_scaffold00029.171 0.8771219194466345 75 AMTR_s00022p00242580 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).Augmin gamma-TuRC recruiting complex.AUG5 component evm_27.TU.AmTr_v1.0_scaffold00022.353 0.8757327502851986 78 AMTR_s00016p00227740 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.RTR Holliday junction dissolution complex.RMI1 non-catalytic component evm_27.TU.AmTr_v1.0_scaffold00016.214 0.8743027270585574 80 AMTR_s00095p00019470 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.8740842468057026 82 AMTR_s00048p00075850 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor evm_27.TU.AmTr_v1.0_scaffold00048.34 0.8737584611650276 83 AMTR_s00131p00046730 Solute transport.carrier-mediated transport.FAX fatty acid transporter evm_27.TU.AmTr_v1.0_scaffold00131.27 0.8737079620734434 84 AMTR_s00010p00228950 UBP1-associated protein 2A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.259 0.8735161244204988 85 AMTR_s00083p00043340 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase evm_27.TU.AmTr_v1.0_scaffold00083.14 0.8732369893361924 86 AMTR_s00095p00020800 Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.5 0.8722775364265747 89 AMTR_s00045p00182070 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.224 0.8710570675868182 93 AMTR_s00022p00213770 evm_27.TU.AmTr_v1.0_scaffold00022.253 0.8708908891276479 94 AMTR_s00045p00090540 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.KAE1 component evm_27.TU.AmTr_v1.0_scaffold00045.82 0.8694201983402177 97 AMTR_s00101p00091430 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ALADIN scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00101.68 0.8691967115766454 98 AMTR_s00019p00256050 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3c component evm_27.TU.AmTr_v1.0_scaffold00019.448 0.8691840038476358 99 AMTR_s00065p00140150 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP4/PCN assembly factor evm_27.TU.AmTr_v1.0_scaffold00065.96 0.8690175834448512 100