Sequence Description Alias PCC hrr AMTR_s00041p00037520 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF160/Yhh1 component evm_27.TU.AmTr_v1.0_scaffold00041.17 0.9522751255644598 4 AMTR_s00002p00118630 evm_27.TU.AmTr_v1.0_scaffold00002.74 0.948549208641316 2 AMTR_s00060p00151140 Microtubule-associated protein 70-1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00060.89 0.9475898527533313 3 AMTR_s00029p00216320 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00029.325 0.943786060165257 4 AMTR_s00066p00041260 Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.18 0.9428572572998952 15 AMTR_s00078p00165690 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00078.154 0.9418233619369527 9 AMTR_s00049p00191680 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.GP210 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00049.202 0.9407045051994704 7 AMTR_s00045p00059360 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.CSTLP nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00045.43 0.9403284583467101 8 AMTR_s00032p00163130 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VIII kinase families.LRR-VIII-2 kinase evm_27.TU.AmTr_v1.0_scaffold00032.136 0.9387509458266303 9 AMTR_s00010p00249970 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor evm_27.TU.AmTr_v1.0_scaffold00010.349 0.9380338406699898 10 AMTR_s00015p00161490 Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00015.32 0.9350407530413037 11 AMTR_s00156p00058400 Cell cycle.organelle machineries.organelle fission.plastid division.FtsZ prokaryotic-tubulin filaments.FtsZ1 component evm_27.TU.AmTr_v1.0_scaffold00156.29 0.9339410646997216 12 AMTR_s00047p00204360 evm_27.TU.AmTr_v1.0_scaffold00047.136 0.932500421231312 13 AMTR_s00115p00126760 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00115.20 0.9322907506688776 14 AMTR_s00044p00098420 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00044.69 0.9317390122323603 42 AMTR_s00104p00054580 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein evm_27.TU.AmTr_v1.0_scaffold00104.16 0.9299376993054809 32 AMTR_s00002p00251730 Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.362 0.9298559504692857 46 AMTR_s00101p00117720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-gamma evm_27.TU.AmTr_v1.0_scaffold00101.91 0.9291685587185623 18 AMTR_s00039p00125380 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor evm_27.TU.AmTr_v1.0_scaffold00039.79 0.9255255833497064 92 AMTR_s00068p00160530 evm_27.TU.AmTr_v1.0_scaffold00068.112 0.9252128225905325 34 AMTR_s00002p00079350 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component evm_27.TU.AmTr_v1.0_scaffold00002.39 0.9251804511094838 21 AMTR_s00045p00203910 Chromatin organisation.histone modifications.histone arginine methylation.PRMT4 histone methylase evm_27.TU.AmTr_v1.0_scaffold00045.269 0.9244175295402799 32 AMTR_s00019p00168020 Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.166 0.9243925187373311 23 AMTR_s00099p00073810 Uncharacterized protein At5g08430 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.54 0.9240388129147148 24 AMTR_s00004p00038450 Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.21 0.9238480947645249 25 AMTR_s00119p00078800 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.NUP214 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00119.58 0.9225794822340504 26 AMTR_s00154p00074010 evm_27.TU.AmTr_v1.0_scaffold00154.49 0.9219776591178086 75 AMTR_s00010p00044630 Protein SWEETIE OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.22 0.9218223396059949 52 AMTR_s00044p00121440 Probable protein S-acyltransferase 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.105 0.9201493892610774 30 AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.9195903246517718 62 AMTR_s00050p00180490 Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00050.40 0.9192557401014524 32 AMTR_s00019p00174630 evm_27.TU.AmTr_v1.0_scaffold00019.176 0.9191195645030765 33 AMTR_s00025p00221910 External stimuli response.drought.stomatal closure signalling.CAU1 histone methylase evm_27.TU.AmTr_v1.0_scaffold00025.311 0.9187553081929317 34 AMTR_s00122p00082000 Cell cycle.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.catalytic component evm_27.TU.AmTr_v1.0_scaffold00122.30 0.9177452654670752 36 AMTR_s00025p00237300 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecY2 component evm_27.TU.AmTr_v1.0_scaffold00025.355 0.9177065370196399 37 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9164280826429516 65 AMTR_s00077p00170260 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter evm_27.TU.AmTr_v1.0_scaffold00077.187 0.9158124426500229 41 AMTR_s00016p00215520 evm_27.TU.AmTr_v1.0_scaffold00016.191 0.9156866457003273 42 AMTR_s00119p00032770 Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.DHR2-type exchange factor evm_27.TU.AmTr_v1.0_scaffold00119.17 0.9154218055794212 43 AMTR_s00055p00195550 Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.131 0.9150885952266906 44 AMTR_s00090p00135570 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF6 component evm_27.TU.AmTr_v1.0_scaffold00090.68 0.9148835612695155 81 AMTR_s00021p00061660 Cytoskeleton.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.SCAR component evm_27.TU.AmTr_v1.0_scaffold00021.29 0.9147845575768953 74 AMTR_s00047p00125370 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease evm_27.TU.AmTr_v1.0_scaffold00047.50 0.9146864211856089 58 AMTR_s00186p00032060 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00186.12 0.9143461855844917 55 AMTR_s00111p00096320 evm_27.TU.AmTr_v1.0_scaffold00111.68 0.9141443778269305 50 AMTR_s00101p00130320 Cytoskeleton.microfilament network.actin organisation.SCAB regulator protein evm_27.TU.AmTr_v1.0_scaffold00101.104 0.9140000871399883 52 AMTR_s00182p00037730 Cell cycle.organelle machineries.organelle fission.plastid division.ARC6 FtsZ assembly regulator evm_27.TU.AmTr_v1.0_scaffold00182.17 0.91365276006769 81 AMTR_s00133p00115730 Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.60 0.9135715649675334 80 AMTR_s00025p00140350 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00025.148 0.9135596255805419 56 AMTR_s00017p00219360 Protein modification.phosphorylation.TKL kinase superfamily.URK kinase families.URK-1 kinase evm_27.TU.AmTr_v1.0_scaffold00017.167 0.9135273469748159 56 AMTR_s00004p00135010 Cold shock protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.130 0.9132599463885055 57 AMTR_s00065p00210150 evm_27.TU.AmTr_v1.0_scaffold00065.206 0.9130852326587102 59 AMTR_s00135p00050200 evm_27.TU.AmTr_v1.0_scaffold00135.18 0.9130008551702575 60 AMTR_s00009p00264940 Choline transporter protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.378 0.9126133934360066 61 AMTR_s00008p00241920 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.9124199087630371 62 AMTR_s00073p00176650 Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00073.53 0.9123982846032359 63 AMTR_s00033p00150780 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.97 0.9121270096121732 64 AMTR_s00090p00059550 Cell cycle.cytokinesis.phragmoplast microtubule organization.MAP65-2 microtubule-associated protein evm_27.TU.AmTr_v1.0_scaffold00090.16 0.9116752553911699 65 AMTR_s00048p00228530 Protein modification.phosphorylation.TKL kinase superfamily.LRR-XIII kinase families.LRR-XIIIa kinase evm_27.TU.AmTr_v1.0_scaffold00048.222 0.91113805871745 91 AMTR_s00044p00068470 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.zinc cation transporter (Zn-CDF-type) evm_27.TU.AmTr_v1.0_scaffold00044.39 0.910763986508401 100 AMTR_s00005p00265200 Protein biosynthesis.organelle translation machineries.translation initiation.methionyl-tRNA formyltransferase evm_27.TU.AmTr_v1.0_scaffold00005.223 0.91041941145582 70 AMTR_s00010p00249150 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol V catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00010.345 0.9103218165570334 71 AMTR_s00025p00210690 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.cycloartenol synthase evm_27.TU.AmTr_v1.0_scaffold00025.279 0.910110574683022 73 AMTR_s00025p00038580 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit evm_27.TU.AmTr_v1.0_scaffold00025.17 0.9101049110402469 74 AMTR_s00155p00090610 Cell cycle.cytokinesis.cell-plate formation.AIR9 cell plate maturation factor evm_27.TU.AmTr_v1.0_scaffold00155.62 0.9096385214853507 75 AMTR_s00092p00120720 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00092.84 0.9094625263618229 99 AMTR_s00147p00079450 Cell cycle.regulation.cyclins.CYCH-type cyclin evm_27.TU.AmTr_v1.0_scaffold00147.38 0.9091597627464755 78 AMTR_s00005p00212300 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase evm_27.TU.AmTr_v1.0_scaffold00005.91 0.9088143220675959 79 AMTR_s00106p00139270 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT1 alpha subunit evm_27.TU.AmTr_v1.0_scaffold00106.110 0.9087766883276589 80 AMTR_s00099p00119010 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.MAD1 checkpoint protein evm_27.TU.AmTr_v1.0_scaffold00099.101 0.9086153713667875 81 AMTR_s00044p00170650 evm_27.TU.AmTr_v1.0_scaffold00044.189 0.9084603435634162 88 AMTR_s00001p00269990 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT3 protease evm_27.TU.AmTr_v1.0_scaffold00001.453 0.9082108164913821 84 AMTR_s00023p00032550 Protein trichome birefringence-like 35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.10 0.9082032515711503 85 AMTR_s00089p00153220 evm_27.TU.AmTr_v1.0_scaffold00089.89 0.9079872486369095 86 AMTR_s00039p00226980 evm_27.TU.AmTr_v1.0_scaffold00039.208 0.9074095352695102 92 AMTR_s00049p00141620 Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.122 0.9071117692139125 89 AMTR_s00013p00192790 evm_27.TU.AmTr_v1.0_scaffold00013.125 0.9069287721383704 90 AMTR_s00012p00261500 Probable methyltransferase PMT11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.324 0.9068570356731719 91 AMTR_s00088p00024010 evm_27.TU.AmTr_v1.0_scaffold00088.7 0.9065736335060608 92 AMTR_s00058p00048170 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.phosphoribosyanthranilate isomerase evm_27.TU.AmTr_v1.0_scaffold00058.19 0.9064549346920883 93 AMTR_s00002p00261280 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.bifunctional homoserine dehydrogenase and aspartate kinase evm_27.TU.AmTr_v1.0_scaffold00002.450 0.9060867322527397 96 AMTR_s00131p00060240 DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00131.35 0.9057956729272013 98 AMTR_s00045p00173390 Protein degradation.peptidase families.serine-type peptidase activities.LON protease evm_27.TU.AmTr_v1.0_scaffold00045.207 0.9055083095709014 99 AMTR_s00099p00111970 Chromatin organisation.DNA methylation.non-canonical RNA-directed DNA methylation.SGS3 stabilization factor evm_27.TU.AmTr_v1.0_scaffold00099.95 0.9047854114033499 100