Sequence Description Alias PCC hrr AMTR_s00097p00147570 evm_27.TU.AmTr_v1.0_scaffold00097.46 0.8702732003901454 1 AMTR_s00147p00068820 Uncharacterized protein At1g26090, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00147.29 0.8512976575855434 13 AMTR_s00050p00177040 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL13 component evm_27.TU.AmTr_v1.0_scaffold00050.39 0.8346058594691683 9 AMTR_s00001p00270490 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctional enoyl-CoA hydratase evm_27.TU.AmTr_v1.0_scaffold00001.463 0.8325271148781289 4 AMTR_s00053p00125320 Coenzyme metabolism.tetrapyrrol biosynthesis.heme synthesis and modification.phytochromobilin synthase evm_27.TU.AmTr_v1.0_scaffold00053.73 0.8317500957103212 20 AMTR_s00066p00192100 Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.246 0.8295923298496518 6 AMTR_s00060p00209750 External stimuli response.biotic stress.tobamovirus multiplication.ARL8 small GTPase evm_27.TU.AmTr_v1.0_scaffold00060.154 0.8223047396638609 7 AMTR_s00052p00203680 evm_27.TU.AmTr_v1.0_scaffold00052.102 0.8201030181265522 52 AMTR_s00058p00096230 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.BUB3 checkpoint protein evm_27.TU.AmTr_v1.0_scaffold00058.51 0.8182303970865527 52 AMTR_s00006p00246160 RNA processing.RNA 3-end polyadenylation.Cleavage Factor I (CF-Im) complex.CPFS6/CFIm68 component evm_27.TU.AmTr_v1.0_scaffold00006.131 0.8182003306684722 40 AMTR_s00031p00242430 evm_27.TU.AmTr_v1.0_scaffold00031.115 0.816456032519162 11 AMTR_s00003p00229070 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component evm_27.TU.AmTr_v1.0_scaffold00003.225 0.8117641245759363 12 AMTR_s00065p00209250 evm_27.TU.AmTr_v1.0_scaffold00065.203 0.8086745633295812 13 AMTR_s00065p00067850 Protein SHORT HYPOCOTYL IN WHITE LIGHT 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.35 0.8056974301863323 14 AMTR_s00047p00175150 evm_27.TU.AmTr_v1.0_scaffold00047.98 0.7946251688667979 69 AMTR_s00070p00033350 evm_27.TU.AmTr_v1.0_scaffold00070.10 0.7945976153069177 16 AMTR_s00011p00107500 26S proteasome regulatory subunit 6A homolog OS=Brassica campestris evm_27.TU.AmTr_v1.0_scaffold00011.31 0.7938965341917658 37 AMTR_s00047p00131170 RNA biosynthesis.RNA polymerase III-dependent transcription.TATA box-binding protein (TBP) component evm_27.TU.AmTr_v1.0_scaffold00047.54 0.7870482124791155 30 AMTR_s00003p00264020 RNA biosynthesis.RNA polymerase II-dependent transcription.SPT4/5 transcription elongation factor complex.SPT4 component evm_27.TU.AmTr_v1.0_scaffold00003.356 0.7833154714965969 19 AMTR_s00009p00181330 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00009.113 0.7825674389543468 20 AMTR_s00043p00208100 evm_27.TU.AmTr_v1.0_scaffold00043.69 0.7812131724683214 74 AMTR_s00043p00206710 evm_27.TU.AmTr_v1.0_scaffold00043.68 0.7798699929889146 69 AMTR_s00019p00239490 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT3/4 type-II splicing factor evm_27.TU.AmTr_v1.0_scaffold00019.348 0.777089895901869 71 AMTR_s00157p00036730 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP6/CTR9 component evm_27.TU.AmTr_v1.0_scaffold00157.9 0.7751484208222247 40 AMTR_s00024p00253100 evm_27.TU.AmTr_v1.0_scaffold00024.353 0.7736464277340923 70 AMTR_s00046p00214050 evm_27.TU.AmTr_v1.0_scaffold00046.140 0.7735023620732362 90 AMTR_s00180p00044420 evm_27.TU.AmTr_v1.0_scaffold00180.24 0.7731248395290491 84 AMTR_s00155p00066160 evm_27.TU.AmTr_v1.0_scaffold00155.37 0.7721230794413113 31 AMTR_s00057p00122250 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00057.100 0.7712275014410923 29 AMTR_s00059p00060020 Cytoskeleton.microfilament network.actin organisation.CAP1 regulator protein evm_27.TU.AmTr_v1.0_scaffold00059.37 0.7707775486097809 66 AMTR_s00043p00208200 evm_27.TU.AmTr_v1.0_scaffold00043.70 0.7681500329357526 50 AMTR_s00111p00118430 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN7 component evm_27.TU.AmTr_v1.0_scaffold00111.91 0.7656964636015144 32 AMTR_s00001p00163440 Ammonium transporter 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.150 0.7654956367167758 97 AMTR_s00204p00014180 evm_27.TU.AmTr_v1.0_scaffold00204.2 0.7631322445842902 69 AMTR_s00016p00072060 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.head module.MED28 component evm_27.TU.AmTr_v1.0_scaffold00016.36 0.7628188510743358 46 AMTR_s00197p00017010 evm_27.TU.AmTr_v1.0_scaffold00197.2 0.762360146909152 58 AMTR_s00003p00264810 RNA biosynthesis.transcriptional activation.ULT transcription factor evm_27.TU.AmTr_v1.0_scaffold00003.363 0.7617938459282292 37 AMTR_s00069p00063160 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC2 component evm_27.TU.AmTr_v1.0_scaffold00069.38 0.7616688648209713 38 AMTR_s00092p00163100 Amino acid metabolism.degradation.branched-chain amino acid.isoleucine.3-hydroxypropionate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00092.140 0.7581610151612561 39 AMTR_s00078p00111420 evm_27.TU.AmTr_v1.0_scaffold00078.83 0.7564923337965153 61 AMTR_s00009p00266090 Tetraspanin-19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.391 0.7562803229226159 78 AMTR_s00090p00017190 evm_27.TU.AmTr_v1.0_scaffold00090.1 0.7537758292323561 42 AMTR_s00013p00210840 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.YKT6-type protein evm_27.TU.AmTr_v1.0_scaffold00013.146 0.7475679272238945 43 AMTR_s00137p00055240 evm_27.TU.AmTr_v1.0_scaffold00137.21 0.7428446594475883 44 AMTR_s00171p00056620 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP6 phosphatase evm_27.TU.AmTr_v1.0_scaffold00171.40 0.7421342638161347 45 AMTR_s00022p00224590 evm_27.TU.AmTr_v1.0_scaffold00022.285 0.740747936758251 52 AMTR_s00021p00242690 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.DRP1-type dynamin evm_27.TU.AmTr_v1.0_scaffold00021.256 0.7389489093715434 47 AMTR_s00009p00169200 CASP-like protein 5B1 OS=Ginkgo biloba evm_27.TU.AmTr_v1.0_scaffold00009.98 0.73872722283306 50 AMTR_s00154p00049230 evm_27.TU.AmTr_v1.0_scaffold00154.30 0.7383004739811055 49 AMTR_s00044p00165760 RNA biosynthesis.transcriptional activation.NIN-like superfamily.RKD transcription factor evm_27.TU.AmTr_v1.0_scaffold00044.181 0.738182954121333 66 AMTR_s00021p00229230 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.DNA methylation accessory complex (DDR).DMS3 component evm_27.TU.AmTr_v1.0_scaffold00021.223 0.7369315718783415 56 AMTR_s00063p00167020 evm_27.TU.AmTr_v1.0_scaffold00063.51 0.7349052695639388 52 AMTR_s00033p00237650 Uncharacterized protein At4g38062 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.244 0.7342916034814171 65 AMTR_s00078p00141340 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.phosphoribosyldiphosphate 5-amidotransferase evm_27.TU.AmTr_v1.0_scaffold00078.117 0.7313162595897446 66 AMTR_s00021p00154630 Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.110 0.7299813128209834 56 AMTR_s00130p00115490 RNA biosynthesis.transcriptional activation.TUB transcription factor evm_27.TU.AmTr_v1.0_scaffold00130.59 0.727213944525165 57 AMTR_s00162p00024920 Beclin-1-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00162.5 0.7240697025983638 58 AMTR_s00038p00125360 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).U11/U12-65K snRNP component evm_27.TU.AmTr_v1.0_scaffold00038.69 0.7169068978258378 61 AMTR_s00003p00245690 Phytohormones.signalling peptides.CRP (cysteine-rich-peptide) category.EPF/EPFL family.EPF/EPFL precursor polypeptide evm_27.TU.AmTr_v1.0_scaffold00003.277 0.7162373706712212 98 AMTR_s00109p00017280 evm_27.TU.AmTr_v1.0_scaffold00109.3 0.7161729766758038 63 AMTR_s00038p00135070 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00038.79 0.7161708879167555 64 AMTR_s00071p00202040 evm_27.TU.AmTr_v1.0_scaffold00071.222 0.7154960322337899 65 AMTR_s00043p00103900 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00043.17 0.7149038650010421 66 AMTR_s00009p00180870 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00009.112 0.7145454676321707 67 AMTR_s00124p00054620 evm_27.TU.AmTr_v1.0_scaffold00124.10 0.7141716179082225 68 AMTR_s00047p00130260 RNA biosynthesis.RNA polymerase III-dependent transcription.TATA box-binding protein (TBP) component evm_27.TU.AmTr_v1.0_scaffold00047.53 0.7141129947275819 69 AMTR_s00074p00199180 evm_27.TU.AmTr_v1.0_scaffold00074.126 0.7110075139139829 70 AMTR_s00126p00020360 evm_27.TU.AmTr_v1.0_scaffold00126.2 0.7093936807721097 78 AMTR_s00066p00125980 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase evm_27.TU.AmTr_v1.0_scaffold00066.119 0.7092253969009673 80 AMTR_s00162p00027280 Beclin-1-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00162.7 0.7085340563651921 73 AMTR_s00074p00106610 Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00074.29 0.7083072355144968 74 AMTR_s00009p00202940 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IV kinase evm_27.TU.AmTr_v1.0_scaffold00009.131 0.7061530161904587 75 AMTR_s00004p00127590 Protein QUIRKY OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.116 0.6958491466114634 91 AMTR_s00068p00201560 evm_27.TU.AmTr_v1.0_scaffold00068.173 0.6956047194529593 78 AMTR_s00019p00159010 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP2 protein evm_27.TU.AmTr_v1.0_scaffold00019.153 0.6945400856048396 93 AMTR_s00045p00093610 evm_27.TU.AmTr_v1.0_scaffold00045.89 0.694023776575509 80 AMTR_s00077p00085930 U-box domain-containing protein 62 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.69 0.6931297272244852 81 AMTR_s00031p00020980 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component evm_27.TU.AmTr_v1.0_scaffold00031.3 0.6928995898907715 99 AMTR_s00057p00083990 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.55 0.6923814900739163 84 AMTR_s00017p00237410 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-C cofactor evm_27.TU.AmTr_v1.0_scaffold00017.200 0.6903504364756752 86 AMTR_s00045p00034660 Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.11 0.6902958084106964 87 AMTR_s00111p00144160 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00111.125 0.6879843584108077 90 AMTR_s00045p00142900 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-II complex.VPS25 component evm_27.TU.AmTr_v1.0_scaffold00045.148 0.6872795621739747 91 AMTR_s00004p00158820 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.168 0.6867994087229174 92 AMTR_s00021p00181480 evm_27.TU.AmTr_v1.0_scaffold00021.139 0.6854382880372206 93 AMTR_s00086p00161040 evm_27.TU.AmTr_v1.0_scaffold00086.98 0.6810693538554856 95 AMTR_s00062p00108710 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG10 ATG12-conjugation E2 protein evm_27.TU.AmTr_v1.0_scaffold00062.84 0.6809464594042437 96 AMTR_s00143p00107110 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease evm_27.TU.AmTr_v1.0_scaffold00143.28 0.680897459114806 97 AMTR_s00068p00103110 evm_27.TU.AmTr_v1.0_scaffold00068.51 0.6793599467917623 98 AMTR_s00054p00027360 evm_27.TU.AmTr_v1.0_scaffold00054.6 0.678311512110674 100