Sequence Description Alias PCC hrr AMTR_s00003p00075520 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.43 0.944949696528502 2 AMTR_s00006p00253660 Cell cycle.organelle machineries.DNA replication.type-Ia DNA topoisomerase evm_27.TU.AmTr_v1.0_scaffold00006.171 0.9410236495100383 2 AMTR_s00009p00236210 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP11/MURE component evm_27.TU.AmTr_v1.0_scaffold00009.196 0.9367188637089586 5 AMTR_s00062p00102370 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP evm_27.TU.AmTr_v1.0_scaffold00062.75 0.9342137962383134 4 AMTR_s00031p00067070 Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana 0.9339832148962192 5 AMTR_s00056p00047160 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.29 0.9338666187021503 6 AMTR_s00016p00252780 Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana 0.9235052067827382 7 AMTR_s00114p00128980 evm_27.TU.AmTr_v1.0_scaffold00114.59 0.916521224028919 25 AMTR_s00022p00070510 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00022.51 0.9110984412544174 29 AMTR_s00049p00210350 Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.234 0.9087610488958937 18 AMTR_s00071p00072250 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.42 0.9067132747398353 29 AMTR_s00034p00235670 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit B evm_27.TU.AmTr_v1.0_scaffold00034.119 0.9055355170043674 69 AMTR_s00092p00113280 evm_27.TU.AmTr_v1.0_scaffold00092.71 0.9040727628009395 13 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component evm_27.TU.AmTr_v1.0_scaffold00012.260 0.901375288049901 42 AMTR_s00004p00110090 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase evm_27.TU.AmTr_v1.0_scaffold00004.89 0.8993972900359968 70 AMTR_s00019p00211360 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component evm_27.TU.AmTr_v1.0_scaffold00019.256 0.8984960462624089 16 AMTR_s00133p00020030 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.Whirly-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00133.2 0.8983759671081913 23 AMTR_s00077p00031710 Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.15 0.8945229053960453 22 AMTR_s00080p00141940 tRNA ligase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.64 0.8938102008600168 57 AMTR_s00088p00159600 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00088.130 0.8908932345333647 21 AMTR_s00038p00071780 Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.30 0.8908454190761326 50 AMTR_s00079p00107040 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00079.39 0.8907441932176496 90 AMTR_s00354p00009120 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component evm_27.TU.AmTr_v1.0_scaffold00354.1 0.890647659710095 66 AMTR_s00029p00159590 Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.192 0.8899455436172103 36 AMTR_s00021p00105410 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00021.53 0.8898159941104135 27 AMTR_s00100p00051890 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.granule-bound starch (amylose) synthase evm_27.TU.AmTr_v1.0_scaffold00100.11 0.8897325055785568 28 AMTR_s00067p00038470 evm_27.TU.AmTr_v1.0_scaffold00067.21 0.8885208706940201 36 AMTR_s00021p00196260 evm_27.TU.AmTr_v1.0_scaffold00021.159 0.8868441242060643 65 AMTR_s00100p00087410 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris evm_27.TU.AmTr_v1.0_scaffold00100.26 0.8833669965656952 33 AMTR_s00106p00063870 evm_27.TU.AmTr_v1.0_scaffold00106.40 0.8810690452022902 70 AMTR_s00038p00088230 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00038.43 0.8809220679147641 73 AMTR_s00033p00066570 RNA processing.RNA splicing.DBR1 intron-lariat-RNA degrading enzyme evm_27.TU.AmTr_v1.0_scaffold00033.28 0.880477470191299 37 AMTR_s00189p00041140 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIV-type starch synthase evm_27.TU.AmTr_v1.0_scaffold00189.6 0.8794925115906989 39 AMTR_s00062p00195710 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component evm_27.TU.AmTr_v1.0_scaffold00062.205 0.8773647275394885 68 AMTR_s00011p00258380 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00011.182 0.8770703726818052 52 AMTR_s00107p00082420 DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00107.24 0.876302018809405 47 AMTR_s00004p00168690 Nucleotide metabolism.pyrimidines.catabolism.5-nucleotidase evm_27.TU.AmTr_v1.0_scaffold00004.187 0.8750929359491716 48 AMTR_s00013p00250400 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.Z-ISO zeta-carotene isomerase evm_27.TU.AmTr_v1.0_scaffold00013.225 0.8745104600442893 50 AMTR_s00056p00043140 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.CRS2-CAF splicing factor complexes.CAF component evm_27.TU.AmTr_v1.0_scaffold00056.26 0.8732134106852256 75 AMTR_s00086p00102400 evm_27.TU.AmTr_v1.0_scaffold00086.53 0.8725954014340666 54 AMTR_s00061p00087560 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor evm_27.TU.AmTr_v1.0_scaffold00061.63 0.8724666221670977 55 AMTR_s00011p00266560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.AEF1 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00011.231 0.87236225109179 76 AMTR_s00010p00149200 Phytohormones.auxin.synthesis.indole-3-acetamide (IAM) pathway.indole-3-acetamide hydrolase evm_27.TU.AmTr_v1.0_scaffold00010.107 0.8717446143321304 59 AMTR_s00010p00246330 Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor evm_27.TU.AmTr_v1.0_scaffold00010.333 0.8711288867927318 61 AMTR_s00111p00089410 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP10 assembly factor evm_27.TU.AmTr_v1.0_scaffold00111.60 0.8707756052755112 65 AMTR_s00099p00074160 Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.55 0.8707266321266696 63 AMTR_s00103p00143070 Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00103.100 0.8693770888447878 67 AMTR_s00002p00252090 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial OS=Arabidopsis thaliana 0.8689916226087294 68 AMTR_s00163p00031970 evm_27.TU.AmTr_v1.0_scaffold00163.9 0.868951389661336 96 AMTR_s00175p00056960 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter evm_27.TU.AmTr_v1.0_scaffold00175.29 0.8683130816126553 71 AMTR_s00011p00136520 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP8/TAC6 component evm_27.TU.AmTr_v1.0_scaffold00011.39 0.8672181263107558 74 AMTR_s00031p00037570 evm_27.TU.AmTr_v1.0_scaffold00031.7 0.8669228263589587 75 AMTR_s00126p00013900 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome evm_27.TU.AmTr_v1.0_scaffold00126.1 0.8666738284752324 76 AMTR_s00148p00046020 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor evm_27.TU.AmTr_v1.0_scaffold00148.24 0.8666321599985899 77 AMTR_s00039p00023570 Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana 0.8661144078456195 79 AMTR_s00016p00227430 Multi-process regulation.circadian clock.morning element regulation.TCP20 activation factor evm_27.TU.AmTr_v1.0_scaffold00016.212 0.8654818623202969 81 AMTR_s00029p00193710 Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.261 0.8637988144504152 86 AMTR_s00041p00057360 evm_27.TU.AmTr_v1.0_scaffold00041.29 0.8634656140675848 87 AMTR_s00032p00177680 Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.153 0.8630203486141694 88 AMTR_s00033p00075910 evm_27.TU.AmTr_v1.0_scaffold00033.33 0.8615044922306165 93 AMTR_s00176p00057350 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase evm_27.TU.AmTr_v1.0_scaffold00176.30 0.8605314984603056 96 AMTR_s00135p00058090 Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00135.24 0.8594957254349823 98 AMTR_s00145p00019890 protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00145.1 0.8589831408434141 99 AMTR_s00164p00068000 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component evm_27.TU.AmTr_v1.0_scaffold00164.30 0.8589155813827011 100