Sequence Description Alias PCC hrr AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.9369528777212408 2 AMTR_s00023p00015970 RNA biosynthesis.transcriptional activation.FAR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00023.4 0.9201889108739711 3 AMTR_s00006p00265300 RNA biosynthesis.transcriptional activation.Trihelix transcription factor evm_27.TU.AmTr_v1.0_scaffold00006.275 0.918118359449952 3 AMTR_s00024p00180690 Splicing factor-like protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.141 0.9180601128271909 4 AMTR_s00089p00089760 evm_27.TU.AmTr_v1.0_scaffold00089.47 0.9142747985104976 5 AMTR_s00013p00244720 RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum evm_27.TU.AmTr_v1.0_scaffold00013.205 0.9128386978073464 6 AMTR_s00099p00155770 Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.150 0.9100582442179519 7 AMTR_s00001p00273090 Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.593 0.9091779176143362 8 AMTR_s00001p00152770 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 evm_27.TU.AmTr_v1.0_scaffold00001.137 0.9080817956406654 9 AMTR_s00021p00207790 evm_27.TU.AmTr_v1.0_scaffold00021.180 0.9060662863786163 20 AMTR_s00169p00047130 evm_27.TU.AmTr_v1.0_scaffold00169.29 0.9021291066437932 11 AMTR_s00060p00030440 evm_27.TU.AmTr_v1.0_scaffold00060.6 0.9018669673936947 12 AMTR_s00017p00130610 DDB1- and CUL4-associated factor homolog 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.53 0.8966736088998211 13 AMTR_s00077p00082680 RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-VAL transcription factor evm_27.TU.AmTr_v1.0_scaffold00077.66 0.8956989712514357 18 AMTR_s00089p00034850 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00089.9 0.8956165756744683 25 AMTR_s00048p00020720 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC10 component evm_27.TU.AmTr_v1.0_scaffold00048.3 0.8955420501325936 16 AMTR_s00028p00246730 Protein modification.phosphorylation.TKL kinase superfamily.LRR-X kinase families.LRR-Xa kinase evm_27.TU.AmTr_v1.0_scaffold00028.142 0.8952672721457657 17 AMTR_s00002p00140630 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component evm_27.TU.AmTr_v1.0_scaffold00002.103 0.8918640859704483 27 AMTR_s00027p00222730 evm_27.TU.AmTr_v1.0_scaffold00027.93 0.89084456760691 38 AMTR_s00077p00124730 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin evm_27.TU.AmTr_v1.0_scaffold00077.118 0.890809870367398 20 AMTR_s00058p00137050 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00058.101 0.888582116033291 46 AMTR_s00046p00168380 Flowering time control protein FCA OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.92 0.8878993989694168 48 AMTR_s00009p00238900 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component evm_27.TU.AmTr_v1.0_scaffold00009.205 0.8872710155728535 24 AMTR_s00069p00127620 evm_27.TU.AmTr_v1.0_scaffold00069.88 0.8861672768476468 29 AMTR_s00155p00079840 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF30/Yth1 component evm_27.TU.AmTr_v1.0_scaffold00155.52 0.8859311584933183 26 AMTR_s00004p00270830 RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YC component evm_27.TU.AmTr_v1.0_scaffold00004.302 0.8856307932141874 27 AMTR_s00133p00101570 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.46 0.8820163994148414 29 AMTR_s00031p00165100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.70 0.8818230032631408 43 AMTR_s00069p00173060 Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.150 0.8814957329963304 31 AMTR_s00065p00140150 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP4/PCN assembly factor evm_27.TU.AmTr_v1.0_scaffold00065.96 0.8807482265858488 39 AMTR_s00179p00011640 evm_27.TU.AmTr_v1.0_scaffold00179.1 0.8804834924757601 33 AMTR_s00050p00189240 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase evm_27.TU.AmTr_v1.0_scaffold00050.52 0.8801287610108347 55 AMTR_s00053p00219090 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO chain-forming-ligase E4 enzyme (PIAL) evm_27.TU.AmTr_v1.0_scaffold00053.172 0.8787167509872351 50 AMTR_s00001p00220200 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00001.228 0.8774759642880294 37 AMTR_s00091p00075810 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00091.25 0.877400266495812 49 AMTR_s00018p00254940 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.167 0.8771212319421146 44 AMTR_s00148p00030810 Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00148.13 0.8750827976571429 40 AMTR_s00064p00192980 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.beta subunit evm_27.TU.AmTr_v1.0_scaffold00064.89 0.8742924405177579 57 AMTR_s00153p00073330 Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.37 0.8713901562201656 44 AMTR_s00092p00090110 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA chromatin transcription factor evm_27.TU.AmTr_v1.0_scaffold00092.50 0.8701798162870994 70 AMTR_s00016p00233120 Cell wall.sporopollenin.exine wall formation.NEF1 exine patterning factor evm_27.TU.AmTr_v1.0_scaffold00016.232 0.8683968985951814 46 AMTR_s00066p00154930 F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.158 0.8682613494355554 47 AMTR_s00146p00044900 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.threonine.threonine synthase evm_27.TU.AmTr_v1.0_scaffold00146.23 0.8681170284832265 71 AMTR_s00005p00263980 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).DDX5 pre-mRNA splicing regulator evm_27.TU.AmTr_v1.0_scaffold00005.216 0.8672284095411086 49 AMTR_s00013p00226690 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.carbamoyl phosphate synthetase dimer.large subunit evm_27.TU.AmTr_v1.0_scaffold00013.174 0.8661119395898095 50 AMTR_s00125p00118080 Solute transport.carrier-mediated transport.APC superfamily.HAK/KUP/KT potassium cation transporter evm_27.TU.AmTr_v1.0_scaffold00125.31 0.8650647017230367 51 AMTR_s00303p00010520 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00303.1 0.8646891244457732 98 AMTR_s00036p00235910 evm_27.TU.AmTr_v1.0_scaffold00036.181 0.8641672710837232 77 AMTR_s00066p00161070 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).snRNP40/U5-40kDa snRNP component evm_27.TU.AmTr_v1.0_scaffold00066.171 0.8638760263844005 56 AMTR_s00153p00050640 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.22 0.8625698083934829 56 AMTR_s00038p00136890 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone evm_27.TU.AmTr_v1.0_scaffold00038.82 0.8619034084521259 57 AMTR_s00066p00190730 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor evm_27.TU.AmTr_v1.0_scaffold00066.242 0.8616286014902782 75 AMTR_s00013p00226180 UPF0235 protein At5g63440 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00013.170 0.8609873649146166 59 AMTR_s00002p00175460 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.148 0.8595476503076358 62 AMTR_s00072p00117380 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.59 0.8591214942139461 63 AMTR_s00080p00116860 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.DRP2-type dynamin evm_27.TU.AmTr_v1.0_scaffold00080.49 0.8581846646693306 64 AMTR_s00027p00080950 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP) evm_27.TU.AmTr_v1.0_scaffold00027.25 0.85708525914215 65 AMTR_s00045p00028830 Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.6 0.8559503271447788 67 AMTR_s00082p00053170 evm_27.TU.AmTr_v1.0_scaffold00082.2 0.8558143844502207 68 AMTR_s00059p00117370 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B4 component evm_27.TU.AmTr_v1.0_scaffold00059.91 0.8549310797397075 70 AMTR_s00088p00141580 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type evm_27.TU.AmTr_v1.0_scaffold00088.108 0.8545546085033515 71 AMTR_s00154p00049600 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.homoserine kinase evm_27.TU.AmTr_v1.0_scaffold00154.31 0.854548332412647 72 AMTR_s00111p00143660 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.124 0.8540179864106908 74 AMTR_s00061p00165040 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF6/PRP1/STA1 protein component evm_27.TU.AmTr_v1.0_scaffold00061.166 0.8536592201299036 75 AMTR_s00059p00146300 Protein degradation.peptidase families.metallopeptidase activities.Leishmanolysin-type protease evm_27.TU.AmTr_v1.0_scaffold00059.129 0.8527339937947463 90 AMTR_s00006p00254090 RNA biosynthesis.transcriptional activation.BBR/BPC transcription factor evm_27.TU.AmTr_v1.0_scaffold00006.175 0.852629033575979 81 AMTR_s00002p00251200 Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.357 0.851870832928092 83 AMTR_s00142p00058560 Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00142.32 0.8514560227752307 94 AMTR_s00106p00090850 evm_27.TU.AmTr_v1.0_scaffold00106.59 0.8509820309306865 89 AMTR_s00002p00206060 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3d component evm_27.TU.AmTr_v1.0_scaffold00002.205 0.8498003051904123 88 AMTR_s00012p00059980 Redox homeostasis.low-molecular-weight scavengers.glutathione metabolism.glutathione degradation.oxoprolinase evm_27.TU.AmTr_v1.0_scaffold00012.22 0.849785204398408 90 AMTR_s00051p00079490 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00051.29 0.8497495970836634 91 AMTR_s00056p00215280 RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum evm_27.TU.AmTr_v1.0_scaffold00056.207 0.8486574396041563 93 AMTR_s00157p00058850 evm_27.TU.AmTr_v1.0_scaffold00157.24 0.8477252538569207 96