Sequence Description Alias PCC hrr AMTR_s00041p00009900 evm_27.TU.AmTr_v1.0_scaffold00041.2 0.9267199976188901 7 AMTR_s00020p00012640 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea evm_27.TU.AmTr_v1.0_scaffold00020.3 0.9227742133162742 29 AMTR_s00007p00263960 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) evm_27.TU.AmTr_v1.0_scaffold00007.343 0.9207080720778993 13 AMTR_s00046p00146170 evm_27.TU.AmTr_v1.0_scaffold00046.79 0.9197388081543157 30 AMTR_s00002p00256470 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.408 0.9186717498265817 33 AMTR_s00007p00219480 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase evm_27.TU.AmTr_v1.0_scaffold00007.207 0.9129473328596065 22 AMTR_s00077p00179590 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.LCAA scaffolding component evm_27.TU.AmTr_v1.0_scaffold00077.201 0.9097620790615061 11 AMTR_s00149p00054540 Photosynthesis.photorespiration.glycine cleavage system.H-protein lipoamide-containing component evm_27.TU.AmTr_v1.0_scaffold00149.34 0.907687700393604 57 AMTR_s00072p00084990 Photosynthesis.photophosphorylation.cytochrome b6/f complex.Rieske iron-sulfur component PetC evm_27.TU.AmTr_v1.0_scaffold00072.37 0.9072830994925434 51 AMTR_s00071p00149740 Photosynthesis.photophosphorylation.photosystem II.photoprotection.MPH1 protein evm_27.TU.AmTr_v1.0_scaffold00071.135 0.9055349830441023 80 AMTR_s00012p00252840 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP1 protein evm_27.TU.AmTr_v1.0_scaffold00012.263 0.9038723504648586 15 AMTR_s00010p00244200 evm_27.TU.AmTr_v1.0_scaffold00010.319 0.9037819078274022 12 AMTR_s00025p00042290 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase evm_27.TU.AmTr_v1.0_scaffold00025.21 0.9035969377047097 42 AMTR_s00002p00210720 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL19 component evm_27.TU.AmTr_v1.0_scaffold00002.217 0.902305478111361 46 AMTR_s00061p00196800 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group evm_27.TU.AmTr_v1.0_scaffold00061.232 0.9005532563077883 75 AMTR_s00012p00257120 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC16 component evm_27.TU.AmTr_v1.0_scaffold00012.301 0.8997514018285345 83 AMTR_s00103p00115980 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00103.69 0.8994437899060694 29 AMTR_s00054p00095350 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase evm_27.TU.AmTr_v1.0_scaffold00054.32 0.8988626705827819 62 AMTR_s00040p00174940 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00040.165 0.8986526473424045 51 AMTR_s00004p00145140 evm_27.TU.AmTr_v1.0_scaffold00004.142 0.8976518531267279 41 AMTR_s00025p00041760 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase evm_27.TU.AmTr_v1.0_scaffold00025.20 0.8951048984166328 47 AMTR_s00016p00073950 evm_27.TU.AmTr_v1.0_scaffold00016.37 0.8941722273162123 42 AMTR_s00021p00230830 evm_27.TU.AmTr_v1.0_scaffold00021.226 0.8919298598977492 23 AMTR_s00029p00122880 Disease resistance protein RPS5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.137 0.8913911997194226 70 AMTR_s00001p00191890 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component evm_27.TU.AmTr_v1.0_scaffold00001.191 0.8911440998342819 70 AMTR_s00044p00143330 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein evm_27.TU.AmTr_v1.0_scaffold00044.141 0.8894538585761553 78 AMTR_s00003p00211760 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00003.202 0.8887530594494769 57 AMTR_s00010p00265990 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL2/PQL1 component evm_27.TU.AmTr_v1.0_scaffold00010.518 0.8880702490312579 45 AMTR_s00107p00035950 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component evm_27.TU.AmTr_v1.0_scaffold00107.14 0.8879657575874271 68 AMTR_s00003p00212290 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component evm_27.TU.AmTr_v1.0_scaffold00003.203 0.887917285801253 67 AMTR_s00054p00125650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL21 component evm_27.TU.AmTr_v1.0_scaffold00054.40 0.8872497368447104 57 AMTR_s00044p00116170 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00044.90 0.8858130928321789 47 AMTR_s00001p00271310 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid epsilon ring hydroxylase evm_27.TU.AmTr_v1.0_scaffold00001.484 0.8852178348761456 63 AMTR_s00027p00217960 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.81 0.8839334772786785 60 AMTR_s00004p00065250 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.MET1 protein evm_27.TU.AmTr_v1.0_scaffold00004.48 0.8823156796341002 75 AMTR_s00032p00221170 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00032.228 0.8819579683032689 38 AMTR_s00058p00147520 Probable 2-carboxy-D-arabinitol-1-phosphatase OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.114 0.8789139760269069 84 AMTR_s00039p00096400 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.7-hydroxymethyl chlorophyll(ide) a reductase evm_27.TU.AmTr_v1.0_scaffold00039.54 0.8771582592847983 88 AMTR_s00059p00166490 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component evm_27.TU.AmTr_v1.0_scaffold00059.157 0.8757932355579066 76 AMTR_s00071p00027790 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhO component evm_27.TU.AmTr_v1.0_scaffold00071.12 0.8754852303793635 43 AMTR_s00002p00267790 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB5/NDH18 component evm_27.TU.AmTr_v1.0_scaffold00002.530 0.8731210678734406 47 AMTR_s00156p00076210 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL15 component evm_27.TU.AmTr_v1.0_scaffold00156.37 0.873061742477238 48 AMTR_s00049p00176170 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase evm_27.TU.AmTr_v1.0_scaffold00049.168 0.8729557440014387 98 AMTR_s00099p00023240 evm_27.TU.AmTr_v1.0_scaffold00099.10 0.8724871825961342 63 AMTR_s00002p00197820 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.183 0.8721804182912319 91 AMTR_s00109p00146830 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB3/NDF4 component evm_27.TU.AmTr_v1.0_scaffold00109.159 0.8721760802152765 53 AMTR_s00024p00220440 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.NdhU component evm_27.TU.AmTr_v1.0_scaffold00024.215 0.8702020198387564 84 AMTR_s00092p00162140 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbR evm_27.TU.AmTr_v1.0_scaffold00092.138 0.8701929186394131 56 AMTR_s00059p00183340 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.HCF164 thioredoxin-like factor evm_27.TU.AmTr_v1.0_scaffold00059.198 0.869707863060977 80 AMTR_s00010p00265920 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB4/NDF6 component evm_27.TU.AmTr_v1.0_scaffold00010.515 0.8678600546340591 87 AMTR_s00048p00192820 evm_27.TU.AmTr_v1.0_scaffold00048.152 0.8629820484223117 66 AMTR_s00006p00250270 Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.149 0.8627359690655722 69 AMTR_s00058p00182650 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor evm_27.TU.AmTr_v1.0_scaffold00058.174 0.8599803492179519 97 AMTR_s00007p00256990 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.amylose synthesis regulatory scaffold protein evm_27.TU.AmTr_v1.0_scaffold00007.305 0.8588213142036525 79 AMTR_s00012p00241210 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.216 0.8586676070698871 80 AMTR_s00001p00203320 D-ribulose kinase OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.204 0.8579366908208861 92 AMTR_s00115p00062270 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.Y3IP1 protein evm_27.TU.AmTr_v1.0_scaffold00115.3 0.8554321674897738 87 AMTR_s00019p00172430 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component evm_27.TU.AmTr_v1.0_scaffold00019.172 0.8543046953073781 89 AMTR_s00045p00123650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.RBD1 protein evm_27.TU.AmTr_v1.0_scaffold00045.120 0.8507879122518524 97 AMTR_s00023p00218670 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL10 | mtRPL10 component evm_27.TU.AmTr_v1.0_scaffold00023.162 0.8503950323574054 100