Sequence Description Alias PCC hrr AMTR_s00110p00146400 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.121 0.9638450704386943 2 AMTR_s00002p00271990 evm_27.TU.AmTr_v1.0_scaffold00002.653 0.9507074929272167 17 AMTR_s00491p00000370 5-3 exoribonuclease 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00491.1 0.9494667873918292 3 AMTR_s00032p00063530 evm_27.TU.AmTr_v1.0_scaffold00032.40 0.9493407992241389 7 AMTR_s00110p00053630 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin evm_27.TU.AmTr_v1.0_scaffold00110.24 0.9481675133130103 22 AMTR_s00019p00148170 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein evm_27.TU.AmTr_v1.0_scaffold00019.136 0.9450567058435618 6 AMTR_s00008p00117710 Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00008.49 0.9424320528010989 7 AMTR_s00004p00267320 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component evm_27.TU.AmTr_v1.0_scaffold00004.268 0.9419212324529949 9 AMTR_s00020p00246930 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00020.118 0.9395350994967329 9 AMTR_s00059p00194330 evm_27.TU.AmTr_v1.0_scaffold00059.216 0.9374658497433722 58 AMTR_s00029p00113670 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component evm_27.TU.AmTr_v1.0_scaffold00029.124 0.9373559340871703 19 AMTR_s00025p00031700 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.12 0.935746881634351 31 AMTR_s00084p00036460 evm_27.TU.AmTr_v1.0_scaffold00084.6 0.9335826218941197 13 AMTR_s00060p00196600 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED23 component evm_27.TU.AmTr_v1.0_scaffold00060.141 0.9323438347548149 24 AMTR_s00142p00102260 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00142.67 0.9322327854759661 68 AMTR_s00106p00133350 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component evm_27.TU.AmTr_v1.0_scaffold00106.104 0.9304703917267143 26 AMTR_s00079p00078710 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor evm_27.TU.AmTr_v1.0_scaffold00079.26 0.9296993387278815 17 AMTR_s00077p00115750 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00077.105 0.9295489601220142 68 AMTR_s00066p00129430 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component evm_27.TU.AmTr_v1.0_scaffold00066.122 0.9294652539111672 21 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9292823036034119 26 AMTR_s00059p00199900 Protein modification.phosphorylation.atypical kinase families.PIKK kinase evm_27.TU.AmTr_v1.0_scaffold00059.222 0.9290939733568658 21 AMTR_s00069p00066350 Protein unc-13 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.40 0.9289498446997088 45 AMTR_s00045p00168580 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class I/Ez histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00045.200 0.928708525241878 23 AMTR_s00028p00193460 Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor evm_27.TU.AmTr_v1.0_scaffold00028.85 0.9281494523750673 24 AMTR_s00003p00213880 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase evm_27.TU.AmTr_v1.0_scaffold00003.207 0.928076882689013 25 AMTR_s00048p00175550 evm_27.TU.AmTr_v1.0_scaffold00048.130 0.9265180881634594 26 AMTR_s00140p00029580 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00140.6 0.9263978844591239 27 AMTR_s00002p00255750 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase evm_27.TU.AmTr_v1.0_scaffold00002.396 0.9249419257675664 29 AMTR_s00089p00070210 Pentatricopeptide repeat-containing protein At5g15280, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00089.28 0.9237510877499777 30 AMTR_s00048p00149840 Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.102 0.9234984153137428 31 AMTR_s00042p00226140 evm_27.TU.AmTr_v1.0_scaffold00042.76 0.9234070247388054 32 AMTR_s00009p00267690 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.CPL1/2 phosphatase evm_27.TU.AmTr_v1.0_scaffold00009.409 0.9232930232973455 33 AMTR_s00111p00150590 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00111.135 0.9229914923963738 36 AMTR_s00004p00140970 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.137 0.9227949421143778 36 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9226579511954984 37 AMTR_s00033p00224700 BEACH domain-containing protein B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.211 0.9225537905069542 72 AMTR_s00100p00112150 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS8 CORVET-specific component evm_27.TU.AmTr_v1.0_scaffold00100.35 0.9225226495975504 40 AMTR_s00029p00079800 RNA biosynthesis.transcriptional activation.HUA2 transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.74 0.9219580040451834 41 AMTR_s00110p00115240 External stimuli response.biotic stress.pathogen effector.NLR effector receptor 0.9218921292891409 42 AMTR_s00002p00199670 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF4 component evm_27.TU.AmTr_v1.0_scaffold00002.188 0.9215644297856416 43 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00086.104 0.9211351232877715 74 AMTR_s00007p00088050 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component evm_27.TU.AmTr_v1.0_scaffold00007.52 0.9208000143165416 52 AMTR_s00059p00193620 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase evm_27.TU.AmTr_v1.0_scaffold00059.214 0.9202988591756542 90 AMTR_s00043p00149000 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00043.28 0.9186981424414796 49 AMTR_s00066p00146980 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP) evm_27.TU.AmTr_v1.0_scaffold00066.149 0.9184853445813265 50 AMTR_s00126p00106330 Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG2 component evm_27.TU.AmTr_v1.0_scaffold00126.49 0.9181230691161268 51 AMTR_s00036p00162680 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.78 0.9176910925345915 58 AMTR_s00081p00135280 evm_27.TU.AmTr_v1.0_scaffold00081.50 0.9173653620527762 53 AMTR_s00078p00132750 Protein modification.phosphorylation.atypical kinase families.TAF kinase evm_27.TU.AmTr_v1.0_scaffold00078.111 0.9173060411843715 54 AMTR_s00025p00149970 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG4-XRCC4 ligase complex.LIG4 DNA ligase component evm_27.TU.AmTr_v1.0_scaffold00025.169 0.9164953639077946 55 AMTR_s00082p00059940 Protein RST1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00082.4 0.915743189045863 93 AMTR_s00048p00109480 Putative acyl-activating enzyme 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.55 0.9155625895104937 58 AMTR_s00077p00193670 Cell cycle.cytokinesis.preprophase microtubule organization.MOR1 microtubule-associated protein evm_27.TU.AmTr_v1.0_scaffold00077.237 0.9150994699467945 59 AMTR_s00066p00174610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component evm_27.TU.AmTr_v1.0_scaffold00066.206 0.9147311002785546 60 AMTR_s00044p00091520 Callose synthase 9 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.64 0.9145387827771533 61 AMTR_s00036p00227770 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component evm_27.TU.AmTr_v1.0_scaffold00036.169 0.9144821355197056 62 AMTR_s00009p00261910 Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.342 0.9135000723345709 63 AMTR_s00048p00233710 evm_27.TU.AmTr_v1.0_scaffold00048.233 0.9128908128912719 64 AMTR_s00009p00253500 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00009.266 0.9126602601519825 95 AMTR_s00001p00265330 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit evm_27.TU.AmTr_v1.0_scaffold00001.403 0.9126362668784742 66 AMTR_s00104p00134460 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein evm_27.TU.AmTr_v1.0_scaffold00104.64 0.9124771589837231 67 AMTR_s00173p00060580 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00173.16 0.9122696128716695 78 AMTR_s00008p00268620 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.RAD17 checkpoint protein evm_27.TU.AmTr_v1.0_scaffold00008.241 0.9121031444237453 69 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9119653452017863 75 AMTR_s00025p00182750 RNA biosynthesis.rRNA biogenesis.NOF1 control factor evm_27.TU.AmTr_v1.0_scaffold00025.222 0.911798767584367 90 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9115203408480347 90 AMTR_s00048p00035310 evm_27.TU.AmTr_v1.0_scaffold00048.9 0.9111693062590173 74 AMTR_s00019p00254550 COP1-interactive protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.435 0.9111609442864522 75 AMTR_s00030p00037130 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-III complex-specific components.TRS85 component evm_27.TU.AmTr_v1.0_scaffold00030.12 0.9111197109430583 76 AMTR_s00078p00109260 evm_27.TU.AmTr_v1.0_scaffold00078.82 0.910460388522795 77 AMTR_s00086p00087880 Phytohormones.abscisic acid.synthesis.abscisic aldehyde oxidase evm_27.TU.AmTr_v1.0_scaffold00086.42 0.9086799484037923 78 AMTR_s00078p00192630 evm_27.TU.AmTr_v1.0_scaffold00078.201 0.9085541025798647 79 AMTR_s00071p00038040 Lipid metabolism.glycerolipid synthesis.phosphatidylethanolamine.phosphatidylserine decarboxylation pathway.extramitochondrial phosphatidylserine decarboxylase evm_27.TU.AmTr_v1.0_scaffold00071.20 0.908519474266261 80 AMTR_s00002p00260810 DNA damage-binding protein 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.446 0.907866628958801 81 AMTR_s01224p00002240 evm_27.TU.AmTr_v1.0_scaffold01224.1 0.9075444234810313 84 AMTR_s00074p00196560 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00074.124 0.907427269852203 85 AMTR_s00060p00033670 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component evm_27.TU.AmTr_v1.0_scaffold00060.9 0.9070366894987697 86 AMTR_s00029p00083380 evm_27.TU.AmTr_v1.0_scaffold00029.77 0.9068804966331576 87 AMTR_s00086p00132870 evm_27.TU.AmTr_v1.0_scaffold00086.75 0.9067071037318237 88 AMTR_s00013p00258230 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component evm_27.TU.AmTr_v1.0_scaffold00013.257 0.9066858321273185 89 AMTR_s00007p00173730 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.KA120 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00007.136 0.9065090342561651 90 AMTR_s00155p00037840 BTB/POZ domain-containing protein At1g04390 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.19 0.9061767561349656 91 AMTR_s00062p00213230 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana 0.9060873524388112 92 AMTR_s00078p00166420 Protein degradation.peptidase families.metallopeptidase activities.carboxypeptidase activities.SOL carboxypeptidase evm_27.TU.AmTr_v1.0_scaffold00078.156 0.9060447533890381 93 AMTR_s00044p00033620 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Etl1 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00044.10 0.9047725117538635 96 AMTR_s00025p00230340 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.333 0.9039661552426949 97 AMTR_s00057p00185570 DNA damage response.DNA repair polymerase activities.DNA polymerase zeta complex.REV3 catalytic subunit evm_27.TU.AmTr_v1.0_scaffold00057.201 0.9032441753759743 100