Sequence Description Alias PCC hrr AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.9589792917118195 3 AMTR_s00110p00154620 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.130 0.9543984091603976 3 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9540639468630057 3 AMTR_s00029p00206820 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component evm_27.TU.AmTr_v1.0_scaffold00029.298 0.9540338632043048 4 AMTR_s00011p00229900 evm_27.TU.AmTr_v1.0_scaffold00011.109 0.9426057678599586 5 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00056.21 0.9417863183782196 14 AMTR_s00020p00038010 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00020.9 0.9409543684763996 31 AMTR_s00085p00139780 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.MORC-type auxilary factor evm_27.TU.AmTr_v1.0_scaffold00085.89 0.9401949716251643 23 AMTR_s00147p00073200 evm_27.TU.AmTr_v1.0_scaffold00147.35 0.940161453427095 9 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9394931527435406 21 AMTR_s00049p00191680 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.GP210 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00049.202 0.9391046417072296 11 AMTR_s00055p00196140 Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.133 0.9376909954879367 12 AMTR_s00014p00034060 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00014.10 0.9371528520956374 13 AMTR_s00036p00170130 Nudix hydrolase 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.84 0.936235212634839 14 AMTR_s00122p00126300 evm_27.TU.AmTr_v1.0_scaffold00122.63 0.9360202496576167 15 AMTR_s00029p00198530 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component evm_27.TU.AmTr_v1.0_scaffold00029.274 0.9359161747665036 17 AMTR_s00029p00058780 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.53 0.9357601853452058 17 AMTR_s00021p00172560 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00021.126 0.9332748965399918 21 AMTR_s00022p00244130 Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.358 0.9324357119254029 34 AMTR_s00005p00204930 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component evm_27.TU.AmTr_v1.0_scaffold00005.82 0.9319862403932206 20 AMTR_s00014p00128310 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase evm_27.TU.AmTr_v1.0_scaffold00014.46 0.9306794772898267 21 AMTR_s00013p00056780 evm_27.TU.AmTr_v1.0_scaffold00013.20 0.9304527082640812 32 AMTR_s00106p00098180 evm_27.TU.AmTr_v1.0_scaffold00106.68 0.9294203762836498 47 AMTR_s00019p00219410 evm_27.TU.AmTr_v1.0_scaffold00019.273 0.9292951412875755 24 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9291668758221454 25 AMTR_s00102p00018040 DNA damage response.DNA repair mechanisms.base excision repair (BER).DNA ligase (LIG1) evm_27.TU.AmTr_v1.0_scaffold00102.3 0.9289672472308209 26 AMTR_s00003p00233250 evm_27.TU.AmTr_v1.0_scaffold00003.233 0.9287184806943706 28 AMTR_s00092p00123760 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS53/HIT1 component evm_27.TU.AmTr_v1.0_scaffold00092.88 0.9286888633277754 28 AMTR_s00071p00058700 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.33 0.9284232198506954 31 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00086.104 0.9282991613940836 45 AMTR_s00049p00011400 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.2 0.927918725639857 67 AMTR_s00010p00249150 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol V catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00010.345 0.9269190074429566 32 AMTR_s00048p00141020 Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.89 0.9264889471947318 33 AMTR_s00104p00054580 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein evm_27.TU.AmTr_v1.0_scaffold00104.16 0.9257021194065315 52 AMTR_s00017p00192140 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00017.112 0.9256036103322809 73 AMTR_s00065p00210150 evm_27.TU.AmTr_v1.0_scaffold00065.206 0.9254690037645322 37 AMTR_s00039p00148640 Cell cycle.cytokinesis.preprophase microtubule organization.CLASP microtubule orientation regulator evm_27.TU.AmTr_v1.0_scaffold00039.100 0.9253237489976004 68 AMTR_s00044p00098420 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00044.69 0.9249586467826066 65 AMTR_s00010p00247870 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.340 0.9248157951813196 40 AMTR_s00003p00052150 evm_27.TU.AmTr_v1.0_scaffold00003.32 0.9246070225745351 43 AMTR_s00068p00160530 evm_27.TU.AmTr_v1.0_scaffold00068.112 0.9244450772700782 42 AMTR_s00056p00185560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.ECB2/VAC1 RNA editing factor 0.9243339304810525 43 AMTR_s00197p00040880 Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00197.21 0.9236994798241995 44 AMTR_s00131p00071060 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase evm_27.TU.AmTr_v1.0_scaffold00131.42 0.9234208644547062 45 AMTR_s00099p00147110 evm_27.TU.AmTr_v1.0_scaffold00099.133 0.92308802907303 46 AMTR_s00034p00235670 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit B evm_27.TU.AmTr_v1.0_scaffold00034.119 0.9227369419531871 47 AMTR_s00119p00135690 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit A evm_27.TU.AmTr_v1.0_scaffold00119.113 0.9225499611990549 51 AMTR_s00119p00132020 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class IV ARF-GAP protein evm_27.TU.AmTr_v1.0_scaffold00119.107 0.9225336649581737 61 AMTR_s00106p00107190 evm_27.TU.AmTr_v1.0_scaffold00106.78 0.9223177220393363 50 AMTR_s00017p00132450 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic110 component evm_27.TU.AmTr_v1.0_scaffold00017.54 0.9205814303280292 51 AMTR_s00016p00180540 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component evm_27.TU.AmTr_v1.0_scaffold00016.142 0.9198809135547344 97 AMTR_s00050p00215890 evm_27.TU.AmTr_v1.0_scaffold00050.82 0.9198540105535795 62 AMTR_s00028p00237040 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00028.124 0.919678754044792 54 AMTR_s00004p00261460 Probable protein S-acyltransferase 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.256 0.91931470170913 56 AMTR_s00016p00133200 evm_27.TU.AmTr_v1.0_scaffold00016.91 0.9188176411599408 71 AMTR_s00025p00188660 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.helicase (SEN1) evm_27.TU.AmTr_v1.0_scaffold00025.230 0.9181110906352589 82 AMTR_s00056p00172610 Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.150 0.9180885761386213 60 AMTR_s00065p00209640 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M17 leucyl aminopeptidase (LAP) evm_27.TU.AmTr_v1.0_scaffold00065.204 0.9171769523253943 63 AMTR_s00002p00251730 Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.362 0.9169375436937258 90 AMTR_s00048p00207080 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-D cofactor evm_27.TU.AmTr_v1.0_scaffold00048.181 0.9167985561278962 65 AMTR_s00048p00073770 evm_27.TU.AmTr_v1.0_scaffold00048.33 0.9164235598264315 66 AMTR_s00155p00075220 evm_27.TU.AmTr_v1.0_scaffold00155.49 0.9162634149488121 67 AMTR_s00049p00194600 evm_27.TU.AmTr_v1.0_scaffold00049.205 0.9160787096884505 68 AMTR_s00017p00239150 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.210 0.9160062809497519 91 AMTR_s00061p00196410 Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond evm_27.TU.AmTr_v1.0_scaffold00061.230 0.9159481670014635 70 AMTR_s00002p00215720 evm_27.TU.AmTr_v1.0_scaffold00002.229 0.9156178628273312 73 AMTR_s00009p00265450 MLO-like protein 14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.382 0.915500128887126 75 AMTR_s00048p00132040 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.77 0.9145497486780327 86 AMTR_s00070p00097310 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine beta-lyase evm_27.TU.AmTr_v1.0_scaffold00070.48 0.9139958537722296 76 AMTR_s00128p00114010 Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00128.43 0.9136855212812962 79 AMTR_s00029p00058110 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.52 0.9136202342935037 80 AMTR_s00033p00135980 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00033.71 0.9134157643365268 81 AMTR_s00092p00069380 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP5/TAC12 component evm_27.TU.AmTr_v1.0_scaffold00092.35 0.913266024437874 82 AMTR_s00069p00133460 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.97 0.9132585797407211 83 AMTR_s00029p00211750 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase evm_27.TU.AmTr_v1.0_scaffold00029.309 0.9131699723023078 84 AMTR_s00025p00221910 External stimuli response.drought.stomatal closure signalling.CAU1 histone methylase evm_27.TU.AmTr_v1.0_scaffold00025.311 0.9131353072882094 85 AMTR_s00062p00102370 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP evm_27.TU.AmTr_v1.0_scaffold00062.75 0.9128328427719686 86 AMTR_s00025p00038580 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit evm_27.TU.AmTr_v1.0_scaffold00025.17 0.912735013380587 87 AMTR_s00027p00053690 DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.8 0.9127007129198191 88 AMTR_s00133p00115730 Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.60 0.9122954123526599 90 AMTR_s00047p00175730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00047.99 0.9121743308662198 91 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9114674430453086 92 AMTR_s00101p00130320 Cytoskeleton.microfilament network.actin organisation.SCAB regulator protein evm_27.TU.AmTr_v1.0_scaffold00101.104 0.911394052938937 93 AMTR_s00110p00073830 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp2 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00110.39 0.9108530372818191 94 AMTR_s00140p00082700 evm_27.TU.AmTr_v1.0_scaffold00140.38 0.910836516258161 95 AMTR_s00099p00119010 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.MAD1 checkpoint protein evm_27.TU.AmTr_v1.0_scaffold00099.101 0.9107144073906315 96 AMTR_s00007p00088050 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component evm_27.TU.AmTr_v1.0_scaffold00007.52 0.910526415045173 97 AMTR_s00062p00101520 Cytoskeleton.microtubular network.microtubule dynamics.SPR2 microtubule-stabilizing factor evm_27.TU.AmTr_v1.0_scaffold00062.74 0.9102863981721776 98 AMTR_s00104p00047720 Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.13 0.9100229509114207 99 AMTR_s00025p00142780 Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00025.155 0.90955893286732 100