Sequence Description Alias PCC hrr AMTR_s00057p00042800 RNA biosynthesis.transcriptional activation.CAMTA transcription factor evm_27.TU.AmTr_v1.0_scaffold00057.23 0.9357581299928219 1 AMTR_s00045p00176400 Probable glutamyl endopeptidase, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00045.212 0.9151556549906337 13 AMTR_s00039p00053980 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00039.21 0.9145949646431839 11 AMTR_s00003p00175410 Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.151 0.9095193611387651 4 AMTR_s00008p00166810 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme evm_27.TU.AmTr_v1.0_scaffold00008.90 0.9056240213328062 23 AMTR_s00117p00114400 Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00117.48 0.9054233591603117 23 AMTR_s00048p00069850 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00048.28 0.9041649134682352 7 AMTR_s00046p00107940 Protein translocation.chloroplast.outer envelope TOC translocation system.KOG1 regulatory kinase component evm_27.TU.AmTr_v1.0_scaffold00046.61 0.9012034361242116 8 AMTR_s00101p00064110 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose synthase evm_27.TU.AmTr_v1.0_scaffold00101.37 0.8997347252829713 34 AMTR_s00083p00031040 Photosynthesis.photorespiration.aminotransferases.glutamate-glyoxylate transaminase evm_27.TU.AmTr_v1.0_scaffold00083.7 0.8972405322756721 15 AMTR_s00078p00105470 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase evm_27.TU.AmTr_v1.0_scaffold00078.76 0.8968462675010916 33 AMTR_s00019p00208640 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.251 0.8959424095197727 37 AMTR_s00016p00187060 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase evm_27.TU.AmTr_v1.0_scaffold00016.149 0.8931096367154086 25 AMTR_s00024p00251490 Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.341 0.8928651318947946 51 AMTR_s00066p00101500 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.83 0.8924256401451673 15 AMTR_s00110p00094310 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00110.55 0.88939414065193 72 AMTR_s00022p00070510 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00022.51 0.8889595641634593 86 AMTR_s00071p00100010 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00071.77 0.8884415274759143 100 AMTR_s00004p00026400 Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.10 0.8882743810963498 19 AMTR_s00329p00011770 Solute transport.carrier-mediated transport.MEX maltose transporter evm_27.TU.AmTr_v1.0_scaffold00329.2 0.8881791705657386 38 AMTR_s00161p00056860 Cellular respiration.glycolysis.methylglyoxal degradation.GLX1 lactoyl-glutathione lyase evm_27.TU.AmTr_v1.0_scaffold00161.22 0.888011798752965 21 AMTR_s00110p00042430 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein evm_27.TU.AmTr_v1.0_scaffold00110.17 0.887954137235898 25 AMTR_s00021p00243800 Cell wall.cutin and suberin.cuticular lipid formation.acyl-reduction pathway.wax ester synthase and diacylglycerol acyltransferase evm_27.TU.AmTr_v1.0_scaffold00021.259 0.887775716727781 23 AMTR_s00029p00131600 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00029.149 0.8869540257291025 91 AMTR_s00021p00151130 evm_27.TU.AmTr_v1.0_scaffold00021.107 0.8859855133804885 84 AMTR_s00167p00056240 Lipid metabolism.lipid degradation.triacylglycerol lipase activities.diacyl-/triacylglycerol lipase activities.LIP-type lipase evm_27.TU.AmTr_v1.0_scaffold00167.23 0.885191278400079 26 AMTR_s00121p00128060 Cell cycle.organelle machineries.organelle fission.plastid division.ARC5 dynamin-like protein evm_27.TU.AmTr_v1.0_scaffold00121.36 0.884146011800351 50 AMTR_s00002p00266310 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.glutathione reductase (GR) evm_27.TU.AmTr_v1.0_scaffold00002.507 0.8841431961493507 66 AMTR_s00002p00234380 evm_27.TU.AmTr_v1.0_scaffold00002.271 0.8838085532553179 29 AMTR_s00066p00167590 Thioredoxin-like fold domain-containing protein MRL7, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.192 0.8829452536012108 50 AMTR_s00003p00268300 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.397 0.8819323526593883 94 AMTR_s00077p00105110 DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00077.90 0.8815310437356566 61 AMTR_s00001p00224830 evm_27.TU.AmTr_v1.0_scaffold00001.236 0.8809784149814067 72 AMTR_s00048p00085290 Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris evm_27.TU.AmTr_v1.0_scaffold00048.41 0.8808953803651625 35 AMTR_s00006p00036530 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.9 0.8808770023209631 37 AMTR_s00022p00253450 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CCD carotenoid cleavage dioxygenase evm_27.TU.AmTr_v1.0_scaffold00022.400 0.8797089078024687 37 AMTR_s00133p00020030 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.Whirly-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00133.2 0.8796859887921283 75 AMTR_s00048p00066880 Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.27 0.8775493010811447 51 AMTR_s00006p00259530 Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.218 0.876557422770663 40 AMTR_s00009p00251540 Solute transport.channels.VCCN chloride anion channel evm_27.TU.AmTr_v1.0_scaffold00009.260 0.8751730138587802 42 AMTR_s00126p00013900 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome evm_27.TU.AmTr_v1.0_scaffold00126.1 0.8747443979649888 56 AMTR_s00039p00132380 Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.90 0.8741118102478067 44 AMTR_s00040p00143220 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) evm_27.TU.AmTr_v1.0_scaffold00040.110 0.8738779171606498 62 AMTR_s00065p00179810 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein evm_27.TU.AmTr_v1.0_scaffold00065.151 0.8722191814675172 46 AMTR_s00029p00209660 Carbohydrate metabolism.starch metabolism.degradation.maltose metabolism.cytosolic alpha-glucan phosphorylase evm_27.TU.AmTr_v1.0_scaffold00029.303 0.8719513204523909 47 AMTR_s00012p00060770 Redox homeostasis.low-molecular-weight scavengers.glutathione metabolism.glutathione degradation.oxoprolinase evm_27.TU.AmTr_v1.0_scaffold00012.23 0.8717753930226333 48 AMTR_s00062p00194620 Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).GABA pyruvate transaminase evm_27.TU.AmTr_v1.0_scaffold00062.203 0.8711519934366396 49 AMTR_s00062p00111890 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.mitochondrial ribosome-associated proteins.PPR-type regulatory protein (PPR336) evm_27.TU.AmTr_v1.0_scaffold00062.90 0.8699686491360147 51 AMTR_s00085p00110520 evm_27.TU.AmTr_v1.0_scaffold00085.68 0.8679300083750959 55 AMTR_s00074p00121610 Photosynthesis.photophosphorylation.chlororespiration.PTOX terminal oxidase evm_27.TU.AmTr_v1.0_scaffold00074.38 0.8679166600736113 56 AMTR_s00079p00173010 Nutrient uptake.iron uptake.regulation.HRZ/BRUTUS iron-binding sensor evm_27.TU.AmTr_v1.0_scaffold00079.89 0.8665449410718015 58 AMTR_s00024p00200150 YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.175 0.8665190112925756 59 AMTR_s00031p00080280 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.31 0.8659889035651559 73 AMTR_s00006p00243670 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00006.123 0.8656445117213567 91 AMTR_s00101p00049040 evm_27.TU.AmTr_v1.0_scaffold00101.20 0.8637418401748741 64 AMTR_s00056p00190910 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00056.181 0.8637265891802086 65 AMTR_s00007p00259840 evm_27.TU.AmTr_v1.0_scaffold00007.320 0.8632067583611701 66 AMTR_s00007p00210400 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00007.191 0.8627400705418394 68 AMTR_s00030p00026320 Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG13 accessory component evm_27.TU.AmTr_v1.0_scaffold00030.6 0.8620110651658174 71 AMTR_s00024p00018300 RNA biosynthesis.transcriptional activation.FAR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00024.4 0.8612165256728906 74 AMTR_s00060p00016430 Coenzyme metabolism.tetrapyrrol biosynthesis.heme synthesis and modification.ferrochelatase evm_27.TU.AmTr_v1.0_scaffold00060.3 0.8611686652018279 75 AMTR_s00061p00109710 Proteasome activator subunit 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.84 0.8608575052448871 92 AMTR_s00203p00014010 Disease resistance protein RFL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00203.3 0.8603156058957577 89 AMTR_s00027p00237750 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DET1 regulator component evm_27.TU.AmTr_v1.0_scaffold00027.131 0.8599962193824146 79 AMTR_s00068p00127460 Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.87 0.8589734093835849 82 AMTR_s00053p00021770 evm_27.TU.AmTr_v1.0_scaffold00053.8 0.85802026355205 85 AMTR_s00019p00220910 Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.279 0.8579338459392509 87 AMTR_s00010p00223650 Uncharacterized protein At4g37920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.245 0.8578724118013592 88