Sequence Description Alias PCC hrr AMTR_s00166p00060690 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00166.36 0.957720409356216 1 AMTR_s00049p00227880 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor evm_27.TU.AmTr_v1.0_scaffold00049.275 0.9431607663640631 2 AMTR_s00022p00205270 Phytohormones.jasmonic acid.synthesis.13-lipoxygenase evm_27.TU.AmTr_v1.0_scaffold00022.242 0.9417884437932624 3 AMTR_s00001p00232760 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component evm_27.TU.AmTr_v1.0_scaffold00001.249 0.9391323169020664 4 AMTR_s00091p00081150 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00091.27 0.9281419031326843 5 AMTR_s00001p00175920 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase evm_27.TU.AmTr_v1.0_scaffold00001.167 0.926680001975953 6 AMTR_s00046p00093500 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit b_ evm_27.TU.AmTr_v1.0_scaffold00046.51 0.9214320570319965 8 AMTR_s00002p00100650 evm_27.TU.AmTr_v1.0_scaffold00002.59 0.9180035589059191 12 AMTR_s00021p00158020 RNA biosynthesis.transcriptional activation.TCP transcription factor evm_27.TU.AmTr_v1.0_scaffold00021.111 0.9045715806529522 9 AMTR_s00005p00239290 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiazole synthesis.biosynthetic protein (Thi4) evm_27.TU.AmTr_v1.0_scaffold00005.125 0.9018281860971711 20 AMTR_s00089p00043950 RNA biosynthesis.transcriptional activation.bHLH transcription factor evm_27.TU.AmTr_v1.0_scaffold00089.12 0.8993512471795776 11 AMTR_s00071p00016000 Redox homeostasis.chloroplast redox homeostasis.M-type thioredoxin evm_27.TU.AmTr_v1.0_scaffold00071.5 0.8992632909923436 43 AMTR_s00016p00164160 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein evm_27.TU.AmTr_v1.0_scaffold00016.120 0.8967460947042116 19 AMTR_s00002p00270990 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyllase (CLH) evm_27.TU.AmTr_v1.0_scaffold00002.603 0.8929732521209975 14 AMTR_s00041p00199430 evm_27.TU.AmTr_v1.0_scaffold00041.178 0.8921360070778629 34 AMTR_s00037p00234060 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component evm_27.TU.AmTr_v1.0_scaffold00037.152 0.8906899510105839 32 AMTR_s00024p00238310 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.270 0.8903614878437114 17 AMTR_s00016p00251680 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00016.302 0.890234750671929 64 AMTR_s00018p00243310 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00018.150 0.8897908468206513 42 AMTR_s00022p00242510 Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.352 0.8861361401439901 26 AMTR_s00106p00108310 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component evm_27.TU.AmTr_v1.0_scaffold00106.79 0.8859052696377827 65 AMTR_s00061p00059490 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa3-type component evm_27.TU.AmTr_v1.0_scaffold00061.34 0.8851153967285343 60 AMTR_s00010p00216200 Photosynthesis.calvin cycle.sedoheptulose-1,7-bisphosphatase evm_27.TU.AmTr_v1.0_scaffold00010.221 0.8841627315849339 63 AMTR_s00065p00176540 Cellular respiration.glycolysis.cytosolic glycolysis.glyceraldehyde 3-phosphate dehydrogenase activities.NADP-dependent glyceraldehyde 3-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00065.146 0.8835893604308863 40 AMTR_s00078p00065110 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.BSD2 assembly factor evm_27.TU.AmTr_v1.0_scaffold00078.37 0.8835881156065006 25 AMTR_s00062p00151050 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen evm_27.TU.AmTr_v1.0_scaffold00062.139 0.8827878767059976 26 AMTR_s00057p00165650 evm_27.TU.AmTr_v1.0_scaffold00057.165 0.8827132999002252 27 AMTR_s00029p00223030 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase evm_27.TU.AmTr_v1.0_scaffold00029.342 0.8826854430377727 40 AMTR_s00025p00246210 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00025.394 0.8823128055712572 55 AMTR_s00009p00268340 Protein degradation.peptidase families.serine-type peptidase activities.LON protease evm_27.TU.AmTr_v1.0_scaffold00009.422 0.8772365280672519 30 AMTR_s00165p00029520 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00165.14 0.8755890224933389 31 AMTR_s00143p00079100 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00143.18 0.8754663944349484 32 AMTR_s00058p00047610 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase evm_27.TU.AmTr_v1.0_scaffold00058.18 0.875383991972277 36 AMTR_s00099p00163300 RNA biosynthesis.transcriptional activation.NAC transcription factor evm_27.TU.AmTr_v1.0_scaffold00099.164 0.8751770361951138 77 AMTR_s00059p00176390 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO evm_27.TU.AmTr_v1.0_scaffold00059.181 0.8750663432043917 90 AMTR_s00001p00022550 Redox homeostasis.enzymatic reactive oxygen species scavengers.catalase evm_27.TU.AmTr_v1.0_scaffold00001.7 0.8747730513725553 36 AMTR_s00012p00254100 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00012.273 0.8737725065727939 68 AMTR_s00025p00237880 evm_27.TU.AmTr_v1.0_scaffold00025.357 0.8720661212079878 78 AMTR_s00170p00069910 evm_27.TU.AmTr_v1.0_scaffold00170.33 0.8704998046876197 39 AMTR_s00021p00200120 evm_27.TU.AmTr_v1.0_scaffold00021.166 0.869033138432204 87 AMTR_s00007p00193800 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaK evm_27.TU.AmTr_v1.0_scaffold00007.164 0.8683262894211209 62 AMTR_s00047p00149040 Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00047.69 0.8640352335311604 44 AMTR_s00024p00248370 evm_27.TU.AmTr_v1.0_scaffold00024.319 0.8637910416621531 65 AMTR_s00039p00159460 evm_27.TU.AmTr_v1.0_scaffold00039.112 0.8635827457054214 46 AMTR_s00009p00267810 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component evm_27.TU.AmTr_v1.0_scaffold00009.411 0.8618577209550098 47 AMTR_s00037p00168570 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma evm_27.TU.AmTr_v1.0_scaffold00037.79 0.860453373536071 58 AMTR_s00059p00164750 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor evm_27.TU.AmTr_v1.0_scaffold00059.154 0.8596508261133368 49 AMTR_s00044p00131190 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00044.119 0.8585637004392841 91 AMTR_s00135p00104240 Solute transport.carrier-mediated transport.DMT superfamily.PUP organic cation transporter evm_27.TU.AmTr_v1.0_scaffold00135.60 0.8585426803896913 61 AMTR_s00001p00270240 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component evm_27.TU.AmTr_v1.0_scaffold00001.459 0.856853904454785 53 AMTR_s00058p00051650 evm_27.TU.AmTr_v1.0_scaffold00058.23 0.8556733016425494 54 AMTR_s00007p00164520 evm_27.TU.AmTr_v1.0_scaffold00007.126 0.853722327025506 57 AMTR_s00149p00031690 Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor evm_27.TU.AmTr_v1.0_scaffold00149.10 0.8533998743830936 61 AMTR_s00077p00172700 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhN component evm_27.TU.AmTr_v1.0_scaffold00077.191 0.8533205529907414 99 AMTR_s00045p00175560 Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.209 0.8519572858689514 67 AMTR_s00106p00057410 evm_27.TU.AmTr_v1.0_scaffold00106.33 0.8519349966546735 62 AMTR_s00036p00109340 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL12 component evm_27.TU.AmTr_v1.0_scaffold00036.44 0.8517360039378187 91 AMTR_s00088p00153020 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb1/2/3-type component evm_27.TU.AmTr_v1.0_scaffold00088.122 0.8517055193549105 98 AMTR_s00067p00206610 evm_27.TU.AmTr_v1.0_scaffold00067.230 0.8515249683129664 69 AMTR_s00053p00027630 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00053.10 0.8513957456544011 66 AMTR_s00007p00182110 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP4 protein evm_27.TU.AmTr_v1.0_scaffold00007.145 0.8505224237334958 67 AMTR_s00070p00129320 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin electron carrier evm_27.TU.AmTr_v1.0_scaffold00070.69 0.848866586719813 68 AMTR_s00096p00137440 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.monodehydroascorbate reductase (MDAR) evm_27.TU.AmTr_v1.0_scaffold00096.88 0.8465207559965325 70 AMTR_s00001p00147850 Thioredoxin-like protein CDSP32, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.130 0.8462387615481496 71 AMTR_s00016p00087320 evm_27.TU.AmTr_v1.0_scaffold00016.49 0.8453619970681161 79 AMTR_s00032p00227150 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00032.244 0.8444155358810609 73 AMTR_s00007p00251190 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR6 evm_27.TU.AmTr_v1.0_scaffold00007.284 0.8439103544862234 81 AMTR_s00059p00076320 evm_27.TU.AmTr_v1.0_scaffold00059.51 0.8434704892317042 78 AMTR_s00140p00105610 Photosynthesis.calvin cycle.NADPH-dependent malate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00140.51 0.8431150643690223 79 AMTR_s00033p00142400 evm_27.TU.AmTr_v1.0_scaffold00033.84 0.8426199388515073 80 AMTR_s00045p00209230 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component evm_27.TU.AmTr_v1.0_scaffold00045.285 0.8410874301409491 81 AMTR_s00069p00175260 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT1 protease evm_27.TU.AmTr_v1.0_scaffold00069.155 0.8408822160454208 82 AMTR_s00073p00061640 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor evm_27.TU.AmTr_v1.0_scaffold00073.16 0.8406801995997633 83 AMTR_s00009p00267860 evm_27.TU.AmTr_v1.0_scaffold00009.412 0.840177145224033 84 AMTR_s00049p00073250 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein evm_27.TU.AmTr_v1.0_scaffold00049.46 0.8390109788174726 88 AMTR_s00019p00244740 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.373 0.8370027764647149 91 AMTR_s00165p00028990 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00165.13 0.8357515948034752 92 AMTR_s00002p00253880 Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.377 0.8334035174825898 99 AMTR_s00009p00268850 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase evm_27.TU.AmTr_v1.0_scaffold00009.433 0.8327095288847445 100