Sequence Description Alias PCC hrr AMTR_s00010p00246330 Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor evm_27.TU.AmTr_v1.0_scaffold00010.333 0.9383097099378589 1 AMTR_s00012p00234420 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component evm_27.TU.AmTr_v1.0_scaffold00012.192 0.9378903810550782 7 AMTR_s00061p00131900 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.VCS scaffold component evm_27.TU.AmTr_v1.0_scaffold00061.110 0.9297230741467808 10 AMTR_s00045p00114550 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM3-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00045.110 0.927485445596165 4 AMTR_s00033p00116200 KH domain-containing protein HEN4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.57 0.9261388854748984 5 AMTR_s00148p00040560 evm_27.TU.AmTr_v1.0_scaffold00148.20 0.924757918487732 26 AMTR_s00038p00088230 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00038.43 0.9238151179819034 11 AMTR_s00062p00102370 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP evm_27.TU.AmTr_v1.0_scaffold00062.75 0.923606421255159 16 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9221388767843529 50 AMTR_s00055p00196140 Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.133 0.9206530264895768 57 AMTR_s00047p00175730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00047.99 0.9197875781155234 31 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9174287777085735 34 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9163255450368584 49 AMTR_s00086p00132870 evm_27.TU.AmTr_v1.0_scaffold00086.75 0.9162082596773536 15 AMTR_s00080p00141940 tRNA ligase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.64 0.9159089568544417 16 AMTR_s00025p00214350 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.288 0.9147209392617522 17 AMTR_s00071p00125410 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00071.102 0.9124764021652976 18 AMTR_s00063p00100200 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.17 0.9121970921537217 37 AMTR_s00101p00092980 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.70 0.9120660671840669 21 AMTR_s00017p00132450 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic110 component evm_27.TU.AmTr_v1.0_scaffold00017.54 0.9116403093043449 59 AMTR_s00062p00040090 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DAWDLE pri-miRNA-DCL1 association factor evm_27.TU.AmTr_v1.0_scaffold00062.21 0.9114375980928537 22 AMTR_s00029p00245860 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component evm_27.TU.AmTr_v1.0_scaffold00029.440 0.9113726419608145 23 AMTR_s00016p00255950 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00016.338 0.9107110896129744 48 AMTR_s00682p00010920 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component evm_27.TU.AmTr_v1.0_scaffold00682.1 0.9104276387283288 25 AMTR_s00018p00074980 RNA biosynthesis.transcriptional activation.NAC transcription factor evm_27.TU.AmTr_v1.0_scaffold00018.28 0.9096679504594224 26 AMTR_s00111p00041460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3a component evm_27.TU.AmTr_v1.0_scaffold00111.21 0.9094860152528025 33 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.909451987959104 78 AMTR_s00066p00084950 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.66 0.909328304094152 48 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component evm_27.TU.AmTr_v1.0_scaffold00046.46 0.908896365309592 85 AMTR_s00049p00137690 evm_27.TU.AmTr_v1.0_scaffold00049.118 0.9086114160122541 31 AMTR_s00041p00123630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component evm_27.TU.AmTr_v1.0_scaffold00041.92 0.9068804588355368 40 AMTR_s00003p00212560 evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9062987617147166 70 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9062008872228722 66 AMTR_s00022p00245030 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 evm_27.TU.AmTr_v1.0_scaffold00022.362 0.9043625292382574 42 AMTR_s00182p00016710 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase evm_27.TU.AmTr_v1.0_scaffold00182.5 0.9042349811427886 38 AMTR_s00044p00137040 Solute transport.channels.GLR ligand-gated cation channel evm_27.TU.AmTr_v1.0_scaffold00044.128 0.9036143401206067 44 AMTR_s00027p00142670 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.43 0.9029661128632454 86 AMTR_s00022p00114710 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00022.105 0.9024396134853135 42 AMTR_s00060p00130340 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00060.71 0.900924704996756 53 AMTR_s00077p00182530 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.207 0.9002025062257312 46 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.8982293809077123 85 AMTR_s00004p00128400 Phytohormones.abscisic acid.synthesis.abscisic aldehyde oxidase evm_27.TU.AmTr_v1.0_scaffold00004.118 0.897084096926507 49 AMTR_s00209p00023450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00209.4 0.896874420266284 57 AMTR_s00029p00211750 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase evm_27.TU.AmTr_v1.0_scaffold00029.309 0.8963649945607675 72 AMTR_s00021p00207790 evm_27.TU.AmTr_v1.0_scaffold00021.180 0.895663258712604 52 AMTR_s00061p00196410 Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond evm_27.TU.AmTr_v1.0_scaffold00061.230 0.8955944857530367 84 AMTR_s00001p00272780 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor evm_27.TU.AmTr_v1.0_scaffold00001.562 0.8950154320293523 55 AMTR_s00067p00089960 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.66 0.8943005732918552 56 AMTR_s00063p00087380 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00063.12 0.8927633344077185 58 AMTR_s00021p00078920 Protein modification.phosphorylation.SCY1 kinase evm_27.TU.AmTr_v1.0_scaffold00021.35 0.892065855679368 81 AMTR_s00059p00150840 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.137 0.8917490006523651 67 AMTR_s00131p00018630 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component evm_27.TU.AmTr_v1.0_scaffold00131.4 0.8909948752644269 73 AMTR_s00071p00123130 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00071.99 0.8905195059484556 67 AMTR_s00012p00204440 Lipid metabolism.lipid transport.plastidial lipid import.TGD lipid importer complex.TGD2 substrate binding component evm_27.TU.AmTr_v1.0_scaffold00012.139 0.8896666300678878 68 AMTR_s00049p00202480 Beta-arabinofuranosyltransferase RAY1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.217 0.8893828067561305 90 AMTR_s00088p00170220 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.145 0.8891861762035171 70 AMTR_s00025p00115820 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor evm_27.TU.AmTr_v1.0_scaffold00025.105 0.8885775982522948 74 AMTR_s00096p00107320 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphthoyl-CoA synthase evm_27.TU.AmTr_v1.0_scaffold00096.66 0.8876676062020525 83 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component evm_27.TU.AmTr_v1.0_scaffold00012.260 0.8875174642405655 100 AMTR_s00061p00204480 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.8868002367937963 82 AMTR_s00013p00056220 evm_27.TU.AmTr_v1.0_scaffold00013.19 0.8867058326067861 83 AMTR_s00071p00186380 Protein modification.phosphorylation.CMGC kinase superfamily.GSK kinase evm_27.TU.AmTr_v1.0_scaffold00071.195 0.8860387297263864 85 AMTR_s00108p00104150 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins evm_27.TU.AmTr_v1.0_scaffold00108.20 0.88576307831079 86 AMTR_s00060p00216060 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component evm_27.TU.AmTr_v1.0_scaffold00060.168 0.8852420145827576 89 AMTR_s00067p00115040 evm_27.TU.AmTr_v1.0_scaffold00067.92 0.8848368965891867 93 AMTR_s00057p00189360 Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.205 0.8836771555085952 98 AMTR_s00011p00240280 Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.135 0.8836027334271376 99