Sequence Description Alias PCC hrr AMTR_s00077p00035710 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component evm_27.TU.AmTr_v1.0_scaffold00077.17 0.9280114223203705 2 AMTR_s00149p00026500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit evm_27.TU.AmTr_v1.0_scaffold00149.8 0.9163034051698309 17 AMTR_s00039p00198940 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL24 component evm_27.TU.AmTr_v1.0_scaffold00039.163 0.915959293680852 3 AMTR_s00067p00020220 Protein root UVB sensitive 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.5 0.9133845334061871 4 AMTR_s00067p00134010 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor evm_27.TU.AmTr_v1.0_scaffold00067.117 0.9109142365226011 5 AMTR_s00053p00163590 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL10a component evm_27.TU.AmTr_v1.0_scaffold00053.111 0.9096449072109927 6 AMTR_s00041p00058440 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS4 component evm_27.TU.AmTr_v1.0_scaffold00041.31 0.9091036885635574 19 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor evm_27.TU.AmTr_v1.0_scaffold00101.112 0.9084646168228655 18 AMTR_s00071p00022960 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.Sdo1 maturation factor evm_27.TU.AmTr_v1.0_scaffold00071.10 0.9062570457210609 13 AMTR_s00101p00151570 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL4 component evm_27.TU.AmTr_v1.0_scaffold00101.126 0.9047042704142854 10 AMTR_s00029p00224040 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component evm_27.TU.AmTr_v1.0_scaffold00029.346 0.9042180143669833 12 AMTR_s00019p00040900 evm_27.TU.AmTr_v1.0_scaffold00019.21 0.9040661563167903 12 AMTR_s00012p00265130 Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.368 0.9040388323378462 13 AMTR_s00030p00185140 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00030.118 0.9036813630836518 14 AMTR_s00010p00083470 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00010.46 0.9036040722941971 15 AMTR_s00019p00202640 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00019.237 0.9011796667694664 16 AMTR_s00165p00068240 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00165.46 0.8984447397936947 17 AMTR_s00106p00025830 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3k component evm_27.TU.AmTr_v1.0_scaffold00106.7 0.8964578982696997 18 AMTR_s00103p00136100 evm_27.TU.AmTr_v1.0_scaffold00103.88 0.8963557954315609 19 AMTR_s00116p00067970 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP14 component evm_27.TU.AmTr_v1.0_scaffold00116.6 0.8958971260093413 20 AMTR_s00068p00183630 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL21 component evm_27.TU.AmTr_v1.0_scaffold00068.143 0.8957143331337291 21 AMTR_s00025p00164280 Protein degradation.ER-associated protein degradation (ERAD) machinery.EBS7 plant-specific component evm_27.TU.AmTr_v1.0_scaffold00025.189 0.8951002947968841 22 AMTR_s00061p00187310 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00061.212 0.8946973786826405 27 AMTR_s00006p00263680 Plant cysteine oxidase 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.253 0.894133170660373 24 AMTR_s00029p00231170 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP0 component evm_27.TU.AmTr_v1.0_scaffold00029.368 0.8938009416253571 25 AMTR_s00036p00219140 evm_27.TU.AmTr_v1.0_scaffold00036.153 0.8932916505737867 26 AMTR_s00002p00271660 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component evm_27.TU.AmTr_v1.0_scaffold00002.635 0.8930443983035469 27 AMTR_s00155p00043060 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00155.21 0.892504852053899 38 AMTR_s00012p00240300 evm_27.TU.AmTr_v1.0_scaffold00012.213 0.8924478485487601 29 AMTR_s00056p00107780 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00056.81 0.8913446323902808 30 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.8890748697765724 56 AMTR_s00058p00176500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT3 gamma subunit evm_27.TU.AmTr_v1.0_scaffold00058.166 0.8876143405393324 79 AMTR_s00062p00097510 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-4 component evm_27.TU.AmTr_v1.0_scaffold00062.71 0.8874687629674685 33 AMTR_s00106p00102120 Chaperone protein dnaJ 13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00106.72 0.8850781259407954 34 AMTR_s00078p00051300 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase D activities.PLD-alpha-type phospholipase D evm_27.TU.AmTr_v1.0_scaffold00078.25 0.8834601833257807 35 AMTR_s00114p00123360 evm_27.TU.AmTr_v1.0_scaffold00114.56 0.8833536293881976 61 AMTR_s00003p00265190 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,6-glucuronosyltransferase evm_27.TU.AmTr_v1.0_scaffold00003.366 0.8831756491937715 37 AMTR_s00002p00272060 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm8 component evm_27.TU.AmTr_v1.0_scaffold00002.659 0.8824395235418178 38 AMTR_s00021p00206430 evm_27.TU.AmTr_v1.0_scaffold00021.176 0.8824102659966642 39 AMTR_s00020p00233960 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component evm_27.TU.AmTr_v1.0_scaffold00020.105 0.881936411344022 40 AMTR_s00099p00164950 evm_27.TU.AmTr_v1.0_scaffold00099.165 0.8806711916748242 41 AMTR_s00064p00153650 evm_27.TU.AmTr_v1.0_scaffold00064.63 0.8797598809260702 42 AMTR_s00023p00202890 evm_27.TU.AmTr_v1.0_scaffold00023.143 0.8794957392615296 43 AMTR_s00057p00133180 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1C snRNP component evm_27.TU.AmTr_v1.0_scaffold00057.115 0.8789060516556724 44 AMTR_s00066p00162800 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL5 component evm_27.TU.AmTr_v1.0_scaffold00066.175 0.8784204486007933 45 AMTR_s00023p00222750 Cell cycle.cytokinesis.preprophase microtubule organization.TON1-TRM-PP2A (TTP) preprophase band formation complex.TON1 component evm_27.TU.AmTr_v1.0_scaffold00023.166 0.8765839233682545 46 AMTR_s00057p00137940 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00057.122 0.8764056408476685 47 AMTR_s00053p00166720 evm_27.TU.AmTr_v1.0_scaffold00053.113 0.8763965961660617 48 AMTR_s00025p00199560 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component evm_27.TU.AmTr_v1.0_scaffold00025.253 0.8763851016546993 49 AMTR_s00135p00091990 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component evm_27.TU.AmTr_v1.0_scaffold00135.49 0.8760411912110386 50 AMTR_s00067p00204710 Cellular respiration.oxidative phosphorylation.cytochrome c reductase complex.cytochrome c1 component evm_27.TU.AmTr_v1.0_scaffold00067.223 0.8753420345017698 51 AMTR_s00059p00160430 Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.147 0.8751877982289357 52 AMTR_s00083p00095580 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component evm_27.TU.AmTr_v1.0_scaffold00083.23 0.8749963089816867 53 AMTR_s00153p00079910 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00153.44 0.8745518751525272 54 AMTR_s00061p00156200 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL11 component evm_27.TU.AmTr_v1.0_scaffold00061.143 0.8740654329075545 55 AMTR_s00099p00085080 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.64 0.8727620258164488 56 AMTR_s00066p00018250 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3j component evm_27.TU.AmTr_v1.0_scaffold00066.1 0.8727504183404756 57 AMTR_s00025p00026830 evm_27.TU.AmTr_v1.0_scaffold00025.11 0.8723053037806906 58 AMTR_s00060p00174830 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component evm_27.TU.AmTr_v1.0_scaffold00060.112 0.8715450703568152 59 AMTR_s00164p00063950 evm_27.TU.AmTr_v1.0_scaffold00164.28 0.8698419754520039 61 AMTR_s00088p00117460 Multi-process regulation.Rop GTPase regulatory system.Rop small GTPase evm_27.TU.AmTr_v1.0_scaffold00088.83 0.8693263343716956 62 AMTR_s00001p00102800 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18a component evm_27.TU.AmTr_v1.0_scaffold00001.69 0.8687421725761203 63 AMTR_s00023p00236700 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED4 component evm_27.TU.AmTr_v1.0_scaffold00023.196 0.8687365944100389 64 AMTR_s00002p00272210 RNA processing.RNA modification.rRNA/tRNA methylation.TRM8-TRM82 tRNA guanosine-methyltransferase complex.TRM82 component evm_27.TU.AmTr_v1.0_scaffold00002.672 0.8682134033776951 65 AMTR_s00058p00112040 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.65 0.8680297738073139 66 AMTR_s00039p00228400 evm_27.TU.AmTr_v1.0_scaffold00039.211 0.8678492797178782 68 AMTR_s00136p00077480 evm_27.TU.AmTr_v1.0_scaffold00136.37 0.8671488889819026 70 AMTR_s00072p00050030 E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.18 0.8670983706358136 71 AMTR_s00041p00081370 evm_27.TU.AmTr_v1.0_scaffold00041.48 0.866794633948399 72 AMTR_s00055p00155570 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS8 component evm_27.TU.AmTr_v1.0_scaffold00055.72 0.8664488687974227 73 AMTR_s00006p00267780 evm_27.TU.AmTr_v1.0_scaffold00006.304 0.866264853636678 74 AMTR_s00343p00015240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18 component evm_27.TU.AmTr_v1.0_scaffold00343.5 0.865961701575706 75 AMTR_s00022p00202910 CDK5RAP3-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.238 0.8654572738175357 82 AMTR_s00171p00058490 evm_27.TU.AmTr_v1.0_scaffold00171.41 0.8653628688933735 77 AMTR_s00186p00048110 evm_27.TU.AmTr_v1.0_scaffold00186.20 0.865191780409482 78 AMTR_s00029p00078080 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.STT3 component evm_27.TU.AmTr_v1.0_scaffold00029.71 0.8649601091967365 79 AMTR_s00009p00256060 evm_27.TU.AmTr_v1.0_scaffold00009.284 0.8647475885025285 85 AMTR_s00004p00055230 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group evm_27.TU.AmTr_v1.0_scaffold00004.37 0.8643867802998583 81 AMTR_s00129p00124210 RNA biosynthesis.transcriptional activation.bHLH transcription factor evm_27.TU.AmTr_v1.0_scaffold00129.99 0.8637809134667189 83 AMTR_s00049p00182420 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.APE1 AP-endonuclease evm_27.TU.AmTr_v1.0_scaffold00049.177 0.8635283000884038 84 AMTR_s00077p00121720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3f component evm_27.TU.AmTr_v1.0_scaffold00077.114 0.8628278338077361 85 AMTR_s00029p00111280 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL13 component evm_27.TU.AmTr_v1.0_scaffold00029.120 0.8627916608453334 86 AMTR_s00065p00117290 evm_27.TU.AmTr_v1.0_scaffold00065.69 0.8627487846545926 87 AMTR_s00016p00097180 Protein degradation.peptidase families.cysteine-type peptidase activities.Otubain ubiquitin peptidase.C65 Otubain-type ubiquitin peptidase evm_27.TU.AmTr_v1.0_scaffold00016.56 0.8620986272436099 88 AMTR_s00006p00083160 evm_27.TU.AmTr_v1.0_scaffold00006.30 0.8615054683956721 98 AMTR_s00029p00132520 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL23a component evm_27.TU.AmTr_v1.0_scaffold00029.150 0.8614630796182997 90 AMTR_s00019p00154740 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp43 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00019.144 0.8607243355747186 92 AMTR_s00010p00093760 evm_27.TU.AmTr_v1.0_scaffold00010.52 0.8586672637280014 95 AMTR_s00010p00244660 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPSa component evm_27.TU.AmTr_v1.0_scaffold00010.322 0.8577410826009837 97 AMTR_s00022p00252000 Cellular respiration.oxidative phosphorylation.ATP synthase complex.peripheral MF1 subcomplex.subunit delta/OSCP evm_27.TU.AmTr_v1.0_scaffold00022.392 0.8565007324946415 98 AMTR_s00082p00120830 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol-phosphate phosphatase evm_27.TU.AmTr_v1.0_scaffold00082.25 0.8560662080211651 99