Sequence Description Alias PCC hrr AMTR_s00071p00199450 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter evm_27.TU.AmTr_v1.0_scaffold00071.217 0.9429192858823681 8 AMTR_s00010p00237980 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00010.293 0.91681339146062 49 AMTR_s00070p00046580 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00070.20 0.9145719763239267 3 AMTR_s00036p00206170 evm_27.TU.AmTr_v1.0_scaffold00036.123 0.9134839948067018 22 AMTR_s00077p00134480 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase evm_27.TU.AmTr_v1.0_scaffold00077.129 0.9084642583106198 22 AMTR_s00045p00205250 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00045.272 0.9083697203078772 39 AMTR_s00071p00149740 Photosynthesis.photophosphorylation.photosystem II.photoprotection.MPH1 protein evm_27.TU.AmTr_v1.0_scaffold00071.135 0.9081623793676371 75 AMTR_s00009p00072720 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00009.21 0.9077720075161602 34 AMTR_s00061p00050140 evm_27.TU.AmTr_v1.0_scaffold00061.26 0.9073807100810886 20 AMTR_s00002p00197820 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.183 0.9073633830638745 23 AMTR_s00001p00220750 evm_27.TU.AmTr_v1.0_scaffold00001.229 0.9061473708983926 74 AMTR_s00046p00014960 Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.2 0.9053008818968491 28 AMTR_s00003p00257280 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00003.320 0.903203672750669 51 AMTR_s00101p00041820 evm_27.TU.AmTr_v1.0_scaffold00101.13 0.902607023903503 29 AMTR_s00006p00252810 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein evm_27.TU.AmTr_v1.0_scaffold00006.165 0.9007847498746601 47 AMTR_s00059p00156080 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component evm_27.TU.AmTr_v1.0_scaffold00059.142 0.9007606383724065 46 AMTR_s00029p00240470 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.410 0.900288855664246 52 AMTR_s00006p00260480 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein evm_27.TU.AmTr_v1.0_scaffold00006.222 0.8990800507906834 36 AMTR_s00009p00265580 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.383 0.8980882537321462 41 AMTR_s00020p00012640 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea evm_27.TU.AmTr_v1.0_scaffold00020.3 0.8965350225610542 86 AMTR_s00046p00214930 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.141 0.8960623347221216 50 AMTR_s00059p00166490 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component evm_27.TU.AmTr_v1.0_scaffold00059.157 0.8959147218494705 41 AMTR_s00055p00165940 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00055.86 0.8958756104156856 35 AMTR_s00149p00067730 evm_27.TU.AmTr_v1.0_scaffold00149.45 0.8958724601950735 24 AMTR_s00095p00128730 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.CRD1 catalytic component evm_27.TU.AmTr_v1.0_scaffold00095.88 0.8949375849089932 57 AMTR_s00049p00107230 evm_27.TU.AmTr_v1.0_scaffold00049.81 0.8940282784745948 87 AMTR_s00044p00143330 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein evm_27.TU.AmTr_v1.0_scaffold00044.141 0.8938005971700789 68 AMTR_s00012p00251230 evm_27.TU.AmTr_v1.0_scaffold00012.252 0.8921139890050577 28 AMTR_s00106p00046740 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00106.25 0.8921082370398542 71 AMTR_s00109p00045690 Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.32 0.8918320770282618 66 AMTR_s00025p00248100 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.402 0.8907063502749569 33 AMTR_s00065p00020910 Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.6 0.8900602742973248 32 AMTR_s00092p00157010 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.132 0.8890342819989692 46 AMTR_s00007p00156370 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG evm_27.TU.AmTr_v1.0_scaffold00007.117 0.8882969180838142 61 AMTR_s00133p00054340 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.19 0.8875804786974127 35 AMTR_s00008p00202090 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00008.120 0.8872673058406577 45 AMTR_s00099p00159350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyll dephytylase (CLD) evm_27.TU.AmTr_v1.0_scaffold00099.158 0.8864941776461028 56 AMTR_s00026p00112660 Nucleotide metabolism.purines.phosphotransfers.adenylate kinase evm_27.TU.AmTr_v1.0_scaffold00026.52 0.8860143717811522 79 AMTR_s00019p00236430 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.NFU1/2/3 component evm_27.TU.AmTr_v1.0_scaffold00019.332 0.885494456588529 56 AMTR_s00039p00096400 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.7-hydroxymethyl chlorophyll(ide) a reductase evm_27.TU.AmTr_v1.0_scaffold00039.54 0.8833121270516525 77 AMTR_s00016p00219550 evm_27.TU.AmTr_v1.0_scaffold00016.199 0.8832071702127561 46 AMTR_s00018p00168540 DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.94 0.8804060488080468 87 AMTR_s00044p00116170 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00044.90 0.8786895404326941 62 AMTR_s00057p00165960 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase evm_27.TU.AmTr_v1.0_scaffold00057.167 0.8777315209315274 49 AMTR_s00003p00270950 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR9 evm_27.TU.AmTr_v1.0_scaffold00003.446 0.8776961389659611 68 AMTR_s00008p00118590 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00008.50 0.8775269786769354 69 AMTR_s00048p00223180 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00048.210 0.8768513039412469 94 AMTR_s00155p00018120 Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.7 0.8757019609461729 56 AMTR_s00054p00125650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL21 component evm_27.TU.AmTr_v1.0_scaffold00054.40 0.8754955288966639 82 AMTR_s00149p00067630 Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00149.44 0.875261174398759 58 AMTR_s00043p00168880 BTB/POZ domain-containing protein At3g22104 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00043.37 0.8745434588153479 60 AMTR_s00058p00093170 evm_27.TU.AmTr_v1.0_scaffold00058.50 0.8743305186912071 90 AMTR_s00216p00022320 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphtoate-phytyltransferase evm_27.TU.AmTr_v1.0_scaffold00216.3 0.874303524609387 62 AMTR_s00145p00079180 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL1 component evm_27.TU.AmTr_v1.0_scaffold00145.28 0.8739261474817626 63 AMTR_s00024p00130820 evm_27.TU.AmTr_v1.0_scaffold00024.77 0.8737347786220782 94 AMTR_s00049p00119540 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin evm_27.TU.AmTr_v1.0_scaffold00049.94 0.8733456258460613 65 AMTR_s00048p00222810 evm_27.TU.AmTr_v1.0_scaffold00048.208 0.8727918200687721 76 AMTR_s00117p00058770 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.VDE violaxanthin de-epoxidase evm_27.TU.AmTr_v1.0_scaffold00117.15 0.872479818886854 85 AMTR_s00030p00229610 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00030.182 0.872242590530049 69 AMTR_s00078p00105470 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase evm_27.TU.AmTr_v1.0_scaffold00078.76 0.871515032674376 100 AMTR_s00010p00265920 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB4/NDF6 component evm_27.TU.AmTr_v1.0_scaffold00010.515 0.869992143474245 82 AMTR_s00025p00127130 evm_27.TU.AmTr_v1.0_scaffold00025.119 0.8693329580148494 77 AMTR_s00010p00259680 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00010.427 0.8690486297045062 78 AMTR_s00006p00258450 Coenzyme metabolism.phylloquinone synthesis.multifunctional phylloquinone synthesis protein (PHYLLO) evm_27.TU.AmTr_v1.0_scaffold00006.206 0.8687915523714566 92 AMTR_s00075p00091010 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase evm_27.TU.AmTr_v1.0_scaffold00075.28 0.8686048205496978 91 AMTR_s00024p00252900 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor evm_27.TU.AmTr_v1.0_scaffold00024.352 0.868067128301403 83 AMTR_s00066p00130420 Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.123 0.8661820079992744 89 AMTR_s00203p00014010 Disease resistance protein RFL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00203.3 0.866016880219482 90 AMTR_s00015p00257490 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR membrane-tethering.TROL protein evm_27.TU.AmTr_v1.0_scaffold00015.112 0.8654309667449265 100 AMTR_s00002p00029100 Cytoskeleton.cp-actin-dependent plastid movement.KAC accessory motility factor evm_27.TU.AmTr_v1.0_scaffold00002.13 0.86483635613395 95 AMTR_s00092p00149880 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.118 0.8637026732127927 99 AMTR_s00023p00186390 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin photoreceptor evm_27.TU.AmTr_v1.0_scaffold00023.124 0.8635897462899951 100