Sequence Description Alias PCC hrr AMTR_s00049p00209260 evm_27.TU.AmTr_v1.0_scaffold00049.231 0.9358026654124356 1 AMTR_s00095p00023580 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.9270448894353253 2 AMTR_s00106p00102120 Chaperone protein dnaJ 13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00106.72 0.9217183632278326 3 AMTR_s00036p00184370 evm_27.TU.AmTr_v1.0_scaffold00036.95 0.9161006659652727 4 AMTR_s00058p00112040 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.65 0.9150152460768414 7 AMTR_s00061p00187310 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00061.212 0.9083608433788627 13 AMTR_s00087p00135370 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component evm_27.TU.AmTr_v1.0_scaffold00087.43 0.9062894485059478 9 AMTR_s00155p00078230 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Rrp9/YAO1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00155.51 0.9036759318953305 8 AMTR_s00069p00092600 Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.57 0.8954133478167023 9 AMTR_s00056p00107780 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00056.81 0.8951965642688893 14 AMTR_s00010p00083470 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00010.46 0.8909476262373457 19 AMTR_s00057p00038540 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00057.18 0.8891366059148137 38 AMTR_s00030p00185140 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00030.118 0.8876460176587747 16 AMTR_s00019p00202640 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00019.237 0.8865987301345722 26 AMTR_s00022p00215770 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS1 rRNA removal.BRX1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00022.258 0.8859050060082114 16 AMTR_s00071p00022960 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.Sdo1 maturation factor evm_27.TU.AmTr_v1.0_scaffold00071.10 0.8855907100181417 24 AMTR_s00039p00202100 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS5 component evm_27.TU.AmTr_v1.0_scaffold00039.167 0.8845260901293851 30 AMTR_s00004p00168920 Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.187 0.8818154164632297 26 AMTR_s00177p00038700 Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.15 0.8802099477661393 19 AMTR_s00153p00030600 evm_27.TU.AmTr_v1.0_scaffold00153.10 0.877633221450455 20 AMTR_s00019p00217910 Solute transport.porins.VDAC voltage-gated anion channel evm_27.TU.AmTr_v1.0_scaffold00019.268 0.8772571285241864 21 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.8767160551378513 97 AMTR_s00060p00174830 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component evm_27.TU.AmTr_v1.0_scaffold00060.112 0.8765148320376869 29 AMTR_s00031p00134850 Cell cycle.interphase.DNA replication.elongation.DNA polymerase epsilon complex.Dpb4 non-catalytic component evm_27.TU.AmTr_v1.0_scaffold00031.57 0.875896432094974 24 AMTR_s00046p00087940 evm_27.TU.AmTr_v1.0_scaffold00046.44 0.8757369049780075 25 AMTR_s00016p00126860 0.8756290896736791 26 AMTR_s00061p00213950 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00061.266 0.874924880887421 30 AMTR_s00103p00136100 evm_27.TU.AmTr_v1.0_scaffold00103.88 0.8737378856843832 32 AMTR_s00091p00096420 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC2-type golgin evm_27.TU.AmTr_v1.0_scaffold00091.36 0.8723898283269704 29 AMTR_s00016p00209510 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.MORC-type auxilary factor evm_27.TU.AmTr_v1.0_scaffold00016.182 0.871591707671528 30 AMTR_s00078p00196190 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP50 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00078.205 0.8705706171271036 31 AMTR_s00078p00108880 evm_27.TU.AmTr_v1.0_scaffold00078.80 0.870350778560395 32 AMTR_s00078p00107740 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component evm_27.TU.AmTr_v1.0_scaffold00078.79 0.8697491629188775 43 AMTR_s00126p00067580 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00126.26 0.8693541104150722 34 AMTR_s00109p00125300 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-alpha component evm_27.TU.AmTr_v1.0_scaffold00109.126 0.8670151284120449 39 AMTR_s00002p00269670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component evm_27.TU.AmTr_v1.0_scaffold00002.554 0.867012934268673 36 AMTR_s00036p00219140 evm_27.TU.AmTr_v1.0_scaffold00036.153 0.8668168352924062 60 AMTR_s00041p00068660 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00041.38 0.8657588826724123 38 AMTR_s00012p00142410 evm_27.TU.AmTr_v1.0_scaffold00012.81 0.8651397641327174 39 AMTR_s00049p00182420 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.APE1 AP-endonuclease evm_27.TU.AmTr_v1.0_scaffold00049.177 0.8641135761598229 40 AMTR_s00030p00092010 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.aspartate transcarbamoylase evm_27.TU.AmTr_v1.0_scaffold00030.39 0.8639018710557781 41 AMTR_s00066p00162800 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL5 component evm_27.TU.AmTr_v1.0_scaffold00066.175 0.8636282362873057 56 AMTR_s00030p00241220 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00030.211 0.8635938326211189 43 AMTR_s00067p00046000 Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.27 0.8622967826334236 44 AMTR_s00077p00121720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3f component evm_27.TU.AmTr_v1.0_scaffold00077.114 0.8616682489753373 45 AMTR_s00057p00022490 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL27 component evm_27.TU.AmTr_v1.0_scaffold00057.6 0.8605972967736992 46 AMTR_s00095p00027730 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.8 0.858783942802672 65 AMTR_s00148p00026900 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL12 component evm_27.TU.AmTr_v1.0_scaffold00148.11 0.8563799593916673 48 AMTR_s00146p00068870 UBP1-associated proteins 1C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00146.41 0.8516974895668636 77 AMTR_s00019p00040900 evm_27.TU.AmTr_v1.0_scaffold00019.21 0.8492390032049377 64 AMTR_s00010p00262600 Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.472 0.8472463996706348 52 AMTR_s00135p00091990 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component evm_27.TU.AmTr_v1.0_scaffold00135.49 0.8471758848336415 75 AMTR_s00072p00173000 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.ENP1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00072.122 0.8468204364675533 54 AMTR_s00010p00244300 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.320 0.8460165671873434 64 AMTR_s00023p00202890 evm_27.TU.AmTr_v1.0_scaffold00023.143 0.8456395184396979 56 AMTR_s00018p00200030 evm_27.TU.AmTr_v1.0_scaffold00018.119 0.8436798602054347 58 AMTR_s00007p00238780 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA2 component evm_27.TU.AmTr_v1.0_scaffold00007.248 0.8425296922655365 60 AMTR_s00016p00168950 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor evm_27.TU.AmTr_v1.0_scaffold00016.128 0.841337824613274 61 AMTR_s00033p00158320 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS11 component evm_27.TU.AmTr_v1.0_scaffold00033.103 0.8408772582963288 62 AMTR_s00002p00260990 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop58 snoRNP scaffold component evm_27.TU.AmTr_v1.0_scaffold00002.448 0.8401866213462943 63 AMTR_s00048p00227650 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00048.220 0.8396519257301392 64 AMTR_s00029p00105510 Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.106 0.8388506094890841 65 AMTR_s00012p00132130 Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00012.68 0.8376821100373124 67 AMTR_s00019p00240430 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC9 component evm_27.TU.AmTr_v1.0_scaffold00019.351 0.8376128088194228 68 AMTR_s00010p00225250 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.249 0.8333987775870176 76 AMTR_s00010p00225430 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.250 0.8333987775870176 76 AMTR_s00032p00147450 Anaphase-promoting complex subunit 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.113 0.8332705381221848 76 AMTR_s00165p00048390 evm_27.TU.AmTr_v1.0_scaffold00165.28 0.8331764282230084 77 AMTR_s00006p00254180 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) evm_27.TU.AmTr_v1.0_scaffold00006.176 0.8316672773191366 79 AMTR_s00022p00247820 evm_27.TU.AmTr_v1.0_scaffold00022.371 0.8315084034010892 81 AMTR_s00004p00077740 evm_27.TU.AmTr_v1.0_scaffold00004.60 0.8310853876862317 82 AMTR_s00007p00253380 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN2/QQT1 nuclear import factor evm_27.TU.AmTr_v1.0_scaffold00007.293 0.8308799676508747 83 AMTR_s00051p00095080 Cactin OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00051.40 0.830629018812679 84 AMTR_s00058p00122560 Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.84 0.8293922703639512 88 AMTR_s00119p00130720 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-4 component evm_27.TU.AmTr_v1.0_scaffold00119.104 0.8288515620478262 89 AMTR_s00039p00011800 Protein PIR OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.1 0.8284381718812616 91 AMTR_s00039p00208930 Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.176 0.8244724891361337 93 AMTR_s00002p00247340 Chromatin organisation.histone chaperone activities.NAP-type histone chaperone evm_27.TU.AmTr_v1.0_scaffold00002.335 0.8228481175761743 96 AMTR_s00037p00233460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3m component evm_27.TU.AmTr_v1.0_scaffold00037.150 0.8222206416623488 97 AMTR_s00039p00046970 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.SUVH2/9 methyl-DNA-binding factor evm_27.TU.AmTr_v1.0_scaffold00039.17 0.8217295648566045 98 AMTR_s00017p00257840 Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.291 0.8213903806907887 100