Sequence Description Alias PCC hrr AMTR_s00159p00058480 Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00159.22 0.9513155513606667 3 AMTR_s00092p00109950 Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.68 0.9475704220568048 2 AMTR_s00076p00181180 Protein PTST homolog 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.69 0.9431820229762921 4 AMTR_s00016p00242110 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.258 0.9392064197232081 4 AMTR_s00069p00176780 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen evm_27.TU.AmTr_v1.0_scaffold00069.157 0.9343499059640975 5 AMTR_s00085p00105120 Carbohydrate metabolism.starch metabolism.degradation.phosphorylation.GWD glucan, water dikinase evm_27.TU.AmTr_v1.0_scaffold00085.65 0.9305622077793285 6 AMTR_s00042p00226140 evm_27.TU.AmTr_v1.0_scaffold00042.76 0.9282528957961591 7 AMTR_s00022p00251260 RNA processing.organelle machineries.RNA modification.tRNA thiolation.MnmA pathway.tRNA thiouridylase evm_27.TU.AmTr_v1.0_scaffold00022.388 0.9239677486051626 31 AMTR_s00045p00149950 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00045.161 0.9200590139884262 9 AMTR_s00004p00076010 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.59 0.9174466113584357 10 AMTR_s00082p00059940 Protein RST1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00082.4 0.9169579316465735 87 AMTR_s00111p00138070 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00111.118 0.9147156127277043 67 AMTR_s00032p00018130 Obg-like ATPase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.3 0.9138554290172723 32 AMTR_s00110p00094310 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00110.55 0.9130474192369568 24 AMTR_s00056p00141500 Protein modification.phosphorylation.TKL kinase superfamily.LysM kinase evm_27.TU.AmTr_v1.0_scaffold00056.115 0.9125813926690447 16 AMTR_s00021p00151130 evm_27.TU.AmTr_v1.0_scaffold00021.107 0.9115610297906322 22 AMTR_s00048p00132600 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.78 0.9099367623407894 35 AMTR_s00144p00074180 evm_27.TU.AmTr_v1.0_scaffold00144.37 0.9089363981835926 19 AMTR_s00040p00188540 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme evm_27.TU.AmTr_v1.0_scaffold00040.184 0.9077271651954749 20 AMTR_s00063p00149680 evm_27.TU.AmTr_v1.0_scaffold00063.40 0.9065501005177781 32 AMTR_s00014p00068600 Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00014.19 0.9055718513345651 23 AMTR_s00067p00176230 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00067.180 0.9036895568872507 24 AMTR_s00117p00114400 Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00117.48 0.903268209048684 25 AMTR_s00039p00132380 Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.90 0.9030558460920499 26 AMTR_s00030p00041970 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00030.14 0.9029994953762336 38 AMTR_s00047p00218860 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.FLN2 regulatory factor evm_27.TU.AmTr_v1.0_scaffold00047.167 0.9029934247503827 55 AMTR_s00012p00252800 Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.262 0.9014902534557196 30 AMTR_s00049p00161820 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component evm_27.TU.AmTr_v1.0_scaffold00049.149 0.9004867652206443 40 AMTR_s00006p00243670 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00006.123 0.8995389042039257 33 AMTR_s00062p00112400 evm_27.TU.AmTr_v1.0_scaffold00062.92 0.8990228095591902 65 AMTR_s00002p00236530 CDK5RAP1-like protein OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.279 0.8985382736493229 97 AMTR_s00029p00240470 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.410 0.8985352521899509 57 AMTR_s00042p00221280 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen evm_27.TU.AmTr_v1.0_scaffold00042.72 0.8978023059351875 83 AMTR_s00033p00026050 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) evm_27.TU.AmTr_v1.0_scaffold00033.11 0.8973739413930406 82 AMTR_s00004p00095690 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase evm_27.TU.AmTr_v1.0_scaffold00004.78 0.8968631190575617 42 AMTR_s00016p00242080 Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.257 0.8964205263864872 43 AMTR_s00024p00078360 65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.38 0.8952471021826583 47 AMTR_s00121p00128060 Cell cycle.organelle machineries.organelle fission.plastid division.ARC5 dynamin-like protein evm_27.TU.AmTr_v1.0_scaffold00121.36 0.8946012864746368 49 AMTR_s00061p00120110 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase evm_27.TU.AmTr_v1.0_scaffold00061.96 0.8944322957753151 50 AMTR_s00059p00156080 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component evm_27.TU.AmTr_v1.0_scaffold00059.142 0.8935913286019871 60 AMTR_s00047p00095590 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00047.38 0.893404443977622 62 AMTR_s00011p00265800 Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.222 0.8933611749101461 55 AMTR_s00086p00087880 Phytohormones.abscisic acid.synthesis.abscisic aldehyde oxidase evm_27.TU.AmTr_v1.0_scaffold00086.42 0.8931607210600614 57 AMTR_s00029p00242750 Protein root UVB sensitive 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.424 0.8929922537800455 70 AMTR_s00072p00102490 evm_27.TU.AmTr_v1.0_scaffold00072.49 0.8917693200605864 60 AMTR_s00009p00260200 evm_27.TU.AmTr_v1.0_scaffold00009.319 0.8911265855566001 62 AMTR_s00147p00081880 evm_27.TU.AmTr_v1.0_scaffold00147.43 0.8894423744123215 66 AMTR_s00061p00209430 evm_27.TU.AmTr_v1.0_scaffold00061.259 0.889246785797889 91 AMTR_s00019p00039970 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.19 0.8891049893873925 68 AMTR_s00041p00195800 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP188 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00041.173 0.888820275189286 69 AMTR_s00072p00151180 Phosphoglycerate kinase 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.87 0.8880109296184168 73 AMTR_s00112p00137130 Solute transport.carrier-mediated transport.MFS superfamily.SP family.hexose transporter (SGB/GlcT-type) evm_27.TU.AmTr_v1.0_scaffold00112.35 0.8876357436822767 74 AMTR_s00078p00138290 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter evm_27.TU.AmTr_v1.0_scaffold00078.113 0.887006150188263 76 AMTR_s00167p00056240 Lipid metabolism.lipid degradation.triacylglycerol lipase activities.diacyl-/triacylglycerol lipase activities.LIP-type lipase evm_27.TU.AmTr_v1.0_scaffold00167.23 0.8862400813683624 79 AMTR_s00019p00039340 Solute transport.channels.CorA family.MRS/MGT metal cation transporter evm_27.TU.AmTr_v1.0_scaffold00019.18 0.885871096510077 80 AMTR_s00106p00043170 Leucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00106.22 0.8856722610353934 81 AMTR_s00106p00046740 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00106.25 0.8854702954164914 87 AMTR_s00007p00239300 Receptor-like protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.251 0.8854602610060489 83 AMTR_s00007p00266080 Protein WHATS THIS FACTOR 1 OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00007.368 0.8844750179961463 87 AMTR_s00023p00221340 Multi-process regulation.circadian clock.PRR time-of-day-dependent expressed repressor evm_27.TU.AmTr_v1.0_scaffold00023.165 0.8844244084683143 88 AMTR_s00122p00077720 Photosynthesis.photorespiration.glycerate kinase evm_27.TU.AmTr_v1.0_scaffold00122.28 0.8842853076428788 89 AMTR_s00004p00074570 evm_27.TU.AmTr_v1.0_scaffold00004.56 0.8840917825203847 90 AMTR_s00058p00193720 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.LSF phosphoglucan phosphatase evm_27.TU.AmTr_v1.0_scaffold00058.193 0.8840819974566553 91 AMTR_s00038p00207680 Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.161 0.8839800222418519 92 AMTR_s00017p00186340 evm_27.TU.AmTr_v1.0_scaffold00017.105 0.8839272697398368 93 AMTR_s00002p00254720 Solute transport.channels.CorA family.MRS/MGT metal cation transporter evm_27.TU.AmTr_v1.0_scaffold00002.387 0.8836726256097294 94 AMTR_s00120p00025450 evm_27.TU.AmTr_v1.0_scaffold00120.3 0.8835297676731371 96 AMTR_s00099p00089660 evm_27.TU.AmTr_v1.0_scaffold00099.67 0.8835235302715677 97 AMTR_s00037p00179540 RNA processing.RNA decay.exosome complex.associated co-factors.RRP6L exoribonuclease evm_27.TU.AmTr_v1.0_scaffold00037.86 0.8826403622335651 99 AMTR_s00086p00041180 DNA damage response.DNA repair polymerase activities.DNA polymerase kappa (POLK) evm_27.TU.AmTr_v1.0_scaffold00086.19 0.8824704311799687 100