Sequence Description Alias PCC hrr AT3G54050 high cyclic electron flow 1 HCEF1 0.9261164681223203 5 AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.9257899739089115 2 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.9131099824499099 12 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.9115710855804195 5 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.9063530797774503 5 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.9042351363654182 15 AT3G12780 phosphoglycerate kinase 1 PGK1 0.9030125573505046 9 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.8974779554260259 13 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8959432874873816 21 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8922703555767068 10 AT5G07020 proline-rich family protein 0.8912056510984908 11 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.8881618768865726 13 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.8850034865946159 30 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GC1, SULA 0.8803617952483893 14 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.8793275750476846 15 AT1G76450 Photosystem II reaction center PsbP family protein 0.8767728879436437 16 AT4G37930 serine transhydroxymethyltransferase 1 STM, SHM1, SHMT1 0.8761341455405984 21 AT3G55800 sedoheptulose-bisphosphatase SBPASE 0.8761261031298757 32 AT3G14415 Aldolase-type TIM barrel family protein 0.873539158916646 19 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8720548194588243 20 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8718185246125384 22 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8717008446813114 22 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8710904348578169 23 AT3G26710 cofactor assembly of complex C CCB1 0.8674915025976568 24 AT5G03880 Thioredoxin family protein 0.8662777782472577 25 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8662540591752595 34 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8658237413383416 27 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 APL1, ADG2 0.8635363421990825 28 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8633134843651428 35 AT5G36700 2-phosphoglycolate phosphatase 1 PGLP1, ATPGLP1 0.8633134843651428 35 AT2G39470 PsbP-like protein 2 PPL2 0.8631063183758383 51 AT1G11860 Glycine cleavage T-protein family 0.8629261354864198 39 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8624234688648967 33 AT1G15980 NDH-dependent cyclic electron flow 1 NDH48, NDF1 0.8619529753834991 41 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8615934661476652 35 AT3G14420 Aldolase-type TIM barrel family protein 0.8596598011338168 36 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) emb1629, APO2 0.8586151236025445 37 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.8578626580932974 47 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). 0.8569372484797196 39 AT4G28740 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8550685942171852 40 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.8543034858156635 41 AT4G02530 chloroplast thylakoid lumen protein 0.8539128374500178 46 AT4G38970 fructose-bisphosphate aldolase 2 FBA2 0.8537969189861606 43 AT4G20360 RAB GTPase homolog E1B ATRAB8D, ATRABE1B, RABE1b 0.8531454684904226 44 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region ZKT 0.8530456871739968 46 AT1G32060 phosphoribulokinase PRK 0.8528828221448066 46 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8521621218272714 47 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.8521441670646586 48 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8510116045478837 49 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8506134831968095 50 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8474971468452704 51 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8472631446129641 52 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit GAPA-1, GAPA 0.8468828244793498 53 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.8467887903690279 54 AT3G24430 ATP binding HCF101 0.8467876803802629 55 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8460085435829651 56 AT1G50320 thioredoxin X THX, ATHX, ATX 0.8443498541087414 57 AT5G30510 ribosomal protein S1 RPS1, ARRPS1 0.8433510718228403 58 AT3G46780 plastid transcriptionally active 16 PTAC16 0.8431964910859849 59 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.8431739369153727 61 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8418611261159531 61 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.8417810519531039 62 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8416778272572115 63 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). 0.8405592061538747 64 AT3G62030 rotamase CYP 4 ROC4 0.8402917797997552 65 AT3G01500 carbonic anhydrase 1 CA1, ATBCA1, SABP3, ATSABP3 0.8395986599157018 66 AT1G50450 Saccharopine dehydrogenase 0.8390935995702873 67 AT1G49380 cytochrome c biogenesis protein family 0.8377225324011957 68 AT1G74730 Protein of unknown function (DUF1118) 0.8363134142893495 75 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8345731551003618 70 AT2G32480 ARABIDOPSIS SERIN PROTEASE ARASP 0.8343991143315075 71 AT1G54780 thylakoid lumen 18.3 kDa protein TLP18.3 0.8343634513372455 72 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.8338191053153906 73 AT1G16880 uridylyltransferase-related 0.8331103342593243 74 AT5G21430 Chaperone DnaJ-domain superfamily protein 0.8330523446604885 75 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.8329637503659254 76 AT1G31190 myo-inositol monophosphatase like 1 IMPL1 0.8328908622719913 77 AT1G19150 photosystem I light harvesting complex gene 6 LHCA2*1, LHCA6 0.8317360488155522 78 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8316441677968723 79 AT2G01110 Sec-independent periplasmic protein translocase PGA2, APG2, TATC, UNE3 0.8315888989209521 80 AT1G73060 Low PSII Accumulation 3 LPA3 0.8305258514489224 81 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8301467822024162 82 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.8298285606193845 83 AT1G32080 membrane protein, putative 0.829167173568777 84 AT1G13820 alpha/beta-Hydrolases superfamily protein 0.8280950941336549 85 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8276329421159094 86 AT1G64770 NDH-dependent cyclic electron flow 1 NDH45, NDF2 0.8263130216493688 87 AT1G62750 Translation elongation factor EFG/EF2 protein ATSCO1/CPEF-G, SCO1, ATSCO1 0.826178944148135 88 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.8254931342660131 89 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8252319704819732 90 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.8249654325793442 91 AT3G01480 cyclophilin 38 ATCYP38, CYP38 0.8239652881124735 92 AT5G38660 acclimation of photosynthesis to environment APE1 0.8239545067913289 93 AT5G20140 SOUL heme-binding family protein 0.8229998247485687 94 AT4G39710 FK506-binding protein 16-2 FKBP16-2 0.8225879739716051 95 AT4G09010 ascorbate peroxidase 4 APX4, TL29 0.8214429080758469 96 AT1G06680 photosystem II subunit P-1 OE23, OEE2, PSBP-1, PSII-P 0.8203674011591271 97 AT3G23700 Nucleic acid-binding proteins superfamily 0.8201292407257942 98 AT1G67090 ribulose bisphosphate carboxylase small chain 1A RBCS1A 0.8200357992536615 99 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.8195454139320649 100