Sequence Description Alias PCC hrr AT3G12780 phosphoglycerate kinase 1 PGK1 0.9305724247147702 2 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.9243937608039595 2 AT1G15980 NDH-dependent cyclic electron flow 1 NDH48, NDF1 0.921141292624971 3 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.9176136107951464 6 AT5G36700 2-phosphoglycolate phosphatase 1 PGLP1, ATPGLP1 0.9176136107951464 6 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.9129586314719946 8 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.9086048854968236 7 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.9060209665610416 8 AT3G11945 homogentisate prenyltransferase HST, ATHST, PDS2 0.9057409962230224 9 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.9044594789733809 10 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.9031139218282431 18 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.899323920936602 16 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8990861209360261 17 AT3G54050 high cyclic electron flow 1 HCEF1 0.8980501065762599 21 AT1G32080 membrane protein, putative 0.8925531367174218 15 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.8923575499658398 16 AT3G14420 Aldolase-type TIM barrel family protein 0.8885253938371509 17 AT5G03880 Thioredoxin family protein 0.8855324997500432 18 AT3G14415 Aldolase-type TIM barrel family protein 0.8809426150576372 19 AT3G55800 sedoheptulose-bisphosphatase SBPASE 0.8786407789489733 28 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8761341455405984 21 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.8738949437356739 31 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.8726879610751801 23 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.87267564749935 51 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). 0.8723897719415766 25 AT1G54780 thylakoid lumen 18.3 kDa protein TLP18.3 0.8666152768775615 26 AT2G39730 rubisco activase RCA 0.8656965456640502 27 AT4G09350 Chaperone DnaJ-domain superfamily protein 0.8645217707036611 28 AT5G07020 proline-rich family protein 0.8617529316226998 31 AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.8608878168940991 30 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region ZKT 0.8604431855459214 37 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.8600228259079201 32 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8586770436007681 47 AT3G01500 carbonic anhydrase 1 CA1, ATBCA1, SABP3, ATSABP3 0.8551486933725525 34 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8551440467500916 35 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 APL1, ADG2 0.8543636563391346 36 AT1G32060 phosphoribulokinase PRK 0.8540691754708238 37 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.8525650739489885 38 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8513081956788267 39 AT5G20140 SOUL heme-binding family protein 0.8489792441612659 40 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein 0.8480349193237638 41 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8466451861268257 42 AT2G39470 PsbP-like protein 2 PPL2 0.845737237998087 83 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.8455664512586722 47 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.8402148256782919 49 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GC1, SULA 0.8388586845363626 46 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8381818371323635 47 AT5G38660 acclimation of photosynthesis to environment APE1 0.8376907509168285 48 AT2G01110 Sec-independent periplasmic protein translocase PGA2, APG2, TATC, UNE3 0.8370918649101737 49 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8367337802001505 50 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8329476907186049 51 AT1G64770 NDH-dependent cyclic electron flow 1 NDH45, NDF2 0.8328603286408373 52 AT3G59780 Rhodanese/Cell cycle control phosphatase superfamily protein 0.832603501030231 67 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8325928348976611 54 AT2G32480 ARABIDOPSIS SERIN PROTEASE ARASP 0.8321534523065077 55 AT5G59250 Major facilitator superfamily protein 0.8318748569867709 56 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit GAPA-1, GAPA 0.8314613363325521 57 AT2G21330 fructose-bisphosphate aldolase 1 FBA1 0.8282507904716189 58 AT1G11860 Glycine cleavage T-protein family 0.8268071122942586 93 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). 0.8267315831035261 60 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.8267163616066394 61 AT4G28740 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8266047599004134 62 AT1G77490 thylakoidal ascorbate peroxidase TAPX 0.8257504495643748 63 AT4G38970 fructose-bisphosphate aldolase 2 FBA2 0.8253437509557958 64 AT4G36530 alpha/beta-Hydrolases superfamily protein 0.8253097221124663 65 AT4G18810 NAD(P)-binding Rossmann-fold superfamily protein 0.822535001199923 66 AT1G22850 SNARE associated Golgi protein family 0.8216668995921113 67 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8192399977894225 68 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). 0.8190882676971477 69 AT5G42270 FtsH extracellular protease family FTSH5, VAR1 0.8188434591657803 70 AT4G33470 histone deacetylase 14 ATHDA14, hda14 0.8184904345182091 71 AT4G29590 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0.8178513530124456 72 AT3G46780 plastid transcriptionally active 16 PTAC16 0.816605381073684 97 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8155628861615167 75 AT1G68010 hydroxypyruvate reductase HPR, ATHPR1 0.8145258723952371 76 AT1G06680 photosystem II subunit P-1 OE23, OEE2, PSBP-1, PSII-P 0.812663277912606 77 AT1G50250 FTSH protease 1 FTSH1 0.8124291861305177 78 AT1G13820 alpha/beta-Hydrolases superfamily protein 0.8100468887757097 79 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.809747270714098 80 AT3G23700 Nucleic acid-binding proteins superfamily 0.8092435160142781 81 AT3G24430 ATP binding HCF101 0.8076797496784702 82 AT4G21210 PPDK regulatory protein ATRP1, RP1 0.807497205299989 83 AT2G43945 unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59870.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). 0.8064055320388153 84 AT1G62750 Translation elongation factor EFG/EF2 protein ATSCO1/CPEF-G, SCO1, ATSCO1 0.8024988748592922 86 AT5G04140 glutamate synthase 1 GLU1, FD-GOGAT, GLS1, GLUS 0.8014548679194112 88 AT1G31190 myo-inositol monophosphatase like 1 IMPL1 0.8012458027588918 89 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8008997165745969 90 AT2G34460 NAD(P)-binding Rossmann-fold superfamily protein 0.8000857205227097 91 AT1G70760 inorganic carbon transport protein-related CRR23 0.7998797468221109 92 AT1G16880 uridylyltransferase-related 0.7996923454846754 93 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.7992291424692637 94 AT5G58330 lactate/malate dehydrogenase family protein 0.7991296276855708 95 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). 0.7978420843024258 97 AT1G49380 cytochrome c biogenesis protein family 0.7968437212794588 98 AT1G64150 Uncharacterized protein family (UPF0016) 0.795633455921792 99 AT5G61410 D-ribulose-5-phosphate-3-epimerase RPE, EMB2728 0.795551653055584 100