Sequence Description Alias PCC hrr AMTR_s00066p00206210 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.282 0.9594160879391743 1 AMTR_s00002p00270610 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade J phosphatase evm_27.TU.AmTr_v1.0_scaffold00002.591 0.957550908800011 2 AMTR_s00085p00149180 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.DNA helicase (RCK/MER3) evm_27.TU.AmTr_v1.0_scaffold00085.93 0.9572580970897946 6 AMTR_s00009p00251110 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.2 protease evm_27.TU.AmTr_v1.0_scaffold00009.258 0.9518592739300217 6 AMTR_s00065p00048130 DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.24 0.9500787694955907 14 AMTR_s00039p00144340 evm_27.TU.AmTr_v1.0_scaffold00039.98 0.9491859881328271 8 AMTR_s00061p00213120 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00061.265 0.9491533388172733 23 AMTR_s00059p00131310 Methyltransferase-like protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.108 0.945553936665643 26 AMTR_s00171p00062850 evm_27.TU.AmTr_v1.0_scaffold00171.47 0.9451548983780262 9 AMTR_s00009p00261370 evm_27.TU.AmTr_v1.0_scaffold00009.332 0.9448601398519633 10 AMTR_s00049p00011400 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.2 0.9435592782033081 19 AMTR_s00002p00236270 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00002.278 0.9434256139097902 12 AMTR_s00138p00029150 evm_27.TU.AmTr_v1.0_scaffold00138.10 0.9433799008849972 20 AMTR_s00045p00073910 Cell wall.hemicellulose.heteromannan.synthesis.mannan synthesis accessory protein evm_27.TU.AmTr_v1.0_scaffold00045.63 0.9428358537978501 14 AMTR_s00041p00059380 evm_27.TU.AmTr_v1.0_scaffold00041.32 0.9402060077948936 37 AMTR_s00001p00273020 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00001.586 0.9400683828298761 43 AMTR_s00046p00229830 External stimuli response.salinity.SOS (Salt Overly Sensitive) signalling pathway.SOS3-SOS2 signalling.SOS2 kinase evm_27.TU.AmTr_v1.0_scaffold00046.173 0.93977442456571 17 AMTR_s00110p00053630 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin evm_27.TU.AmTr_v1.0_scaffold00110.24 0.9395727403661356 50 AMTR_s00055p00187070 Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.116 0.939425448454181 21 AMTR_s00110p00155630 evm_27.TU.AmTr_v1.0_scaffold00110.131 0.9392441977976498 20 AMTR_s00010p00241770 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.plastidial glucanotransferase evm_27.TU.AmTr_v1.0_scaffold00010.311 0.9390724407028692 39 AMTR_s00029p00245320 SMR domain-containing protein At5g58720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.436 0.9390040342997809 22 AMTR_s00002p00268330 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase) evm_27.TU.AmTr_v1.0_scaffold00002.535 0.9385516307205682 37 AMTR_s00090p00083520 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp22 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00090.29 0.9383446841604633 28 AMTR_s00045p00068210 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM734 component evm_27.TU.AmTr_v1.0_scaffold00045.55 0.9379694712858717 76 AMTR_s00083p00130670 Protein modification.phosphorylation.STE kinase superfamily.MAPKK kinase evm_27.TU.AmTr_v1.0_scaffold00083.35 0.9378313968935279 43 AMTR_s00022p00212920 DNA topoisomerase 6 subunit B OS=Oryza sativa subsp. indica evm_27.TU.AmTr_v1.0_scaffold00022.251 0.9377942312134357 48 AMTR_s00044p00041520 evm_27.TU.AmTr_v1.0_scaffold00044.15 0.9375655778827873 30 AMTR_s00026p00019230 DNA repair protein UVH3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00026.2 0.936922699065024 34 AMTR_s00109p00063750 Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.49 0.9364285601282625 30 AMTR_s00037p00070040 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00037.19 0.9360097010735317 50 AMTR_s00183p00036690 evm_27.TU.AmTr_v1.0_scaffold00183.15 0.9358384766155907 32 AMTR_s00197p00038370 evm_27.TU.AmTr_v1.0_scaffold00197.18 0.9353068902644915 35 AMTR_s00025p00230510 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.334 0.9351636133219279 34 AMTR_s00148p00070910 Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.45 0.9344883803387654 48 AMTR_s00023p00193470 Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.133 0.9342255368618904 36 AMTR_s00002p00271330 Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.622 0.9330578703560832 37 AMTR_s00019p00204140 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS52/POK component evm_27.TU.AmTr_v1.0_scaffold00019.240 0.9330062567688008 38 AMTR_s00029p00178860 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).U11-48K snRNP component evm_27.TU.AmTr_v1.0_scaffold00029.238 0.9319627944308924 39 AMTR_s00046p00187790 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.113 0.931920561389078 40 AMTR_s00059p00178020 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC3 component evm_27.TU.AmTr_v1.0_scaffold00059.189 0.9316983975076628 62 AMTR_s00049p00176850 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.RGS1 G-protein immune signalling regulator evm_27.TU.AmTr_v1.0_scaffold00049.169 0.9313467729205221 42 AMTR_s00045p00168580 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class I/Ez histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00045.200 0.9308720003043743 43 AMTR_s00003p00258530 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-II complex-specific components.TRS130/CLUB component evm_27.TU.AmTr_v1.0_scaffold00003.323 0.9303328618342215 44 AMTR_s00003p00270420 0.9300844648114187 45 AMTR_s00119p00089670 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC6-type golgin evm_27.TU.AmTr_v1.0_scaffold00119.69 0.9300250802173323 46 AMTR_s00092p00120720 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00092.84 0.9294536395350304 47 AMTR_s00040p00191090 Dynein regulatory complex subunit 7 (Fragment) OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00040.189 0.9294363812592509 48 AMTR_s00059p00100910 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00059.74 0.9289525352990077 49 AMTR_s00030p00198000 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) receptor complex.SR-alpha component evm_27.TU.AmTr_v1.0_scaffold00030.132 0.9289263814515862 50 AMTR_s00058p00120430 evm_27.TU.AmTr_v1.0_scaffold00058.82 0.9286652177077911 63 AMTR_s00025p00136600 Redox homeostasis.low-molecular-weight scavengers.glutathione metabolism.glutathione biosynthesis.glutathione synthetase (GS) evm_27.TU.AmTr_v1.0_scaffold00025.140 0.928500611767746 52 AMTR_s00080p00046380 Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.12 0.927884611703812 53 AMTR_s00066p00191280 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase evm_27.TU.AmTr_v1.0_scaffold00066.244 0.927635067124232 54 AMTR_s00025p00200390 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase evm_27.TU.AmTr_v1.0_scaffold00025.254 0.9275679909698635 90 AMTR_s00057p00150120 evm_27.TU.AmTr_v1.0_scaffold00057.136 0.9275212279785032 57 AMTR_s00063p00176210 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter evm_27.TU.AmTr_v1.0_scaffold00063.57 0.927235018825112 57 AMTR_s00055p00041510 Histidine kinase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.12 0.927149108782098 70 AMTR_s00059p00194330 evm_27.TU.AmTr_v1.0_scaffold00059.216 0.9271048879044774 97 AMTR_s00101p00067890 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component evm_27.TU.AmTr_v1.0_scaffold00101.41 0.9268358102142848 60 AMTR_s00002p00271990 evm_27.TU.AmTr_v1.0_scaffold00002.653 0.9264228451475358 88 AMTR_s00045p00163960 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.RPAP3 polymerase- II regulator protein evm_27.TU.AmTr_v1.0_scaffold00045.188 0.925336077797999 66 AMTR_s00094p00104260 Cytochrome P450 97B2, chloroplastic OS=Glycine max evm_27.TU.AmTr_v1.0_scaffold00094.9 0.9248010147458494 63 AMTR_s00067p00129330 Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.111 0.9244954243023698 64 AMTR_s00025p00031700 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.12 0.9240117481786809 76 AMTR_s00038p00208310 Protein WHATS THIS FACTOR 1 OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00038.162 0.9238942580995647 66 AMTR_s00002p00261540 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.453 0.9236547578988692 84 AMTR_s00095p00178810 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MAG2 component evm_27.TU.AmTr_v1.0_scaffold00095.158 0.9235742898614905 68 AMTR_s00149p00069080 DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00149.47 0.9235264970605951 69 AMTR_s01464p00006980 Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component evm_27.TU.AmTr_v1.0_scaffold01464.1 0.9229287499745058 70 AMTR_s00138p00085700 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.CASP-type golgin evm_27.TU.AmTr_v1.0_scaffold00138.45 0.9227190151995383 71 AMTR_s00049p00181700 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC6 component evm_27.TU.AmTr_v1.0_scaffold00049.176 0.9218057147357945 72 AMTR_s00002p00255750 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase evm_27.TU.AmTr_v1.0_scaffold00002.396 0.9216425916787839 73 AMTR_s00163p00014030 Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00163.1 0.9214576542032836 74 AMTR_s00036p00195200 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00036.108 0.9211408638918259 75 AMTR_s00077p00115750 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00077.105 0.9211119845466149 95 AMTR_s00044p00146510 Protein modification.N-linked glycosylation.complex N-glycan maturation.GnT-I-type N-acetylglucosamine transferase evm_27.TU.AmTr_v1.0_scaffold00044.149 0.9209024987195827 77 AMTR_s00137p00063430 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00137.24 0.9206670932666968 87 AMTR_s00221p00020810 Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00221.4 0.9205786583419646 79 AMTR_s00007p00224640 GTP-binding protein At2g22870 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.219 0.9199290072698167 82 AMTR_s00155p00036470 evm_27.TU.AmTr_v1.0_scaffold00155.17 0.9191050046649993 81 AMTR_s00103p00089080 Protein degradation.peptidase families.metallopeptidase activities.M16 families.Nardilysin-like peptidase evm_27.TU.AmTr_v1.0_scaffold00103.49 0.919102865150418 82 AMTR_s00040p00198390 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.199 0.9182067417417297 83 AMTR_s00010p00217580 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component evm_27.TU.AmTr_v1.0_scaffold00010.224 0.9181790889114781 84 AMTR_s00007p00268900 F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.398 0.9175195383780129 85 AMTR_s00009p00268760 Multi-process regulation.circadian clock.TOC1 evening oscillator component evm_27.TU.AmTr_v1.0_scaffold00009.431 0.9174883970435435 87 AMTR_s00036p00162680 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.78 0.9171364380298171 88 AMTR_s00009p00265760 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.TFB2-type subunit evm_27.TU.AmTr_v1.0_scaffold00009.387 0.9160216954801106 90 AMTR_s00078p00149090 RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.125 0.9154751568794077 91 AMTR_s00044p00141100 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.NOC4 assembly factor evm_27.TU.AmTr_v1.0_scaffold00044.137 0.9154635191238399 92 AMTR_s00002p00199670 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF4 component evm_27.TU.AmTr_v1.0_scaffold00002.188 0.9152549351207844 93 AMTR_s00041p00133990 Solute transport.carrier-mediated transport.OPT family.oligopeptide transporter (OPT-type) evm_27.TU.AmTr_v1.0_scaffold00041.94 0.9151019621995014 94 AMTR_s00044p00224480 Auxin-responsive protein IAA32 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.245 0.9149765290126551 95 AMTR_s00111p00150590 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00111.135 0.9149045873337461 96 AMTR_s00155p00053970 WPP domain-associated protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.28 0.9148660151977143 97 AMTR_s00009p00256980 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.SHOC1-PTD heterodimer.SHOC1 endonuclease component (ZIP2) evm_27.TU.AmTr_v1.0_scaffold00009.291 0.9146904173031479 98