Sequence Description Alias PCC hrr AMTR_s00044p00033620 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Etl1 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00044.10 0.9576314349402526 1 AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.9514521945218727 2 AMTR_s00045p00076020 RNA biosynthesis.transcriptional activation.SBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00045.66 0.9511017406068099 3 AMTR_s00069p00119460 Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.80 0.9503783205901957 4 AMTR_s00029p00094300 RNA processing.RNA quality control Exon Junction complex (EJC).core components.eIF4A3 helicase component evm_27.TU.AmTr_v1.0_scaffold00029.87 0.9464232559387687 5 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9462544591461928 7 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9417622559562606 7 AMTR_s00044p00137040 Solute transport.channels.GLR ligand-gated cation channel evm_27.TU.AmTr_v1.0_scaffold00044.128 0.9407010722975936 8 AMTR_s00002p00270030 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00002.567 0.9405082974016868 9 AMTR_s00003p00052150 evm_27.TU.AmTr_v1.0_scaffold00003.32 0.9392682791795463 12 AMTR_s00046p00164820 Protein modification.acetylation.NatC-type N-terminal acetylase complex.NAA35 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00046.88 0.938578271970446 11 AMTR_s00110p00037960 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SMARCAL1-like group.SMARCAL1 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00110.12 0.9384225374305801 65 AMTR_s00036p00173790 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00036.85 0.9373472636145517 13 AMTR_s00022p00244130 Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.358 0.9349045890744333 28 AMTR_s00131p00040500 Small RNA degrading nuclease 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00131.25 0.9347485808799092 15 AMTR_s00081p00160620 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.head module.MED17 component evm_27.TU.AmTr_v1.0_scaffold00081.69 0.9341834551502942 29 AMTR_s00110p00073830 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp2 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00110.39 0.9332758557005713 22 AMTR_s00059p00150840 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.137 0.9331294055470868 18 AMTR_s00020p00038010 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00020.9 0.9320476976055946 71 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9315003250143891 20 AMTR_s00119p00089670 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC6-type golgin evm_27.TU.AmTr_v1.0_scaffold00119.69 0.9314787046165516 21 AMTR_s00060p00196600 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED23 component evm_27.TU.AmTr_v1.0_scaffold00060.141 0.9308657002719931 31 AMTR_s00142p00102260 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00142.67 0.930764410871763 77 AMTR_s00004p00267320 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component evm_27.TU.AmTr_v1.0_scaffold00004.268 0.9301739199744015 36 AMTR_s00682p00010920 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component evm_27.TU.AmTr_v1.0_scaffold00682.1 0.9295682186741396 25 AMTR_s00007p00201600 E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.177 0.9292823036034119 26 AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00003.89 0.9292788142308324 27 AMTR_s00159p00062070 RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor evm_27.TU.AmTr_v1.0_scaffold00159.24 0.9292508414396048 28 AMTR_s00002p00043100 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG6 component evm_27.TU.AmTr_v1.0_scaffold00002.17 0.9283270475620456 29 AMTR_s00016p00241100 ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.254 0.9280945858705403 30 AMTR_s00105p00039650 evm_27.TU.AmTr_v1.0_scaffold00105.16 0.9278109070432183 31 AMTR_s00003p00144740 evm_27.TU.AmTr_v1.0_scaffold00003.116 0.9277596949698547 32 AMTR_s00063p00100200 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.17 0.9274169188077852 33 AMTR_s00037p00070040 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00037.19 0.9268815106766876 85 AMTR_s00068p00177220 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00068.133 0.9267550559823332 35 AMTR_s00021p00172560 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00021.126 0.926018335663644 40 AMTR_s00001p00272780 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor evm_27.TU.AmTr_v1.0_scaffold00001.562 0.9259794858022279 37 AMTR_s00001p00265330 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit evm_27.TU.AmTr_v1.0_scaffold00001.403 0.9259436963012068 38 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9258185250870903 39 AMTR_s00058p00177950 evm_27.TU.AmTr_v1.0_scaffold00058.168 0.9254568150000935 87 AMTR_s00066p00174610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component evm_27.TU.AmTr_v1.0_scaffold00066.206 0.925259896955289 41 AMTR_s00057p00185220 Probable serine/threonine-protein phosphatase 2A regulatory subunit B subunit TON2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.200 0.9250943775053142 42 AMTR_s00099p00147110 evm_27.TU.AmTr_v1.0_scaffold00099.133 0.9250721115389686 43 AMTR_s00100p00112150 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS8 CORVET-specific component evm_27.TU.AmTr_v1.0_scaffold00100.35 0.9249503525654122 44 AMTR_s00092p00157140 evm_27.TU.AmTr_v1.0_scaffold00092.133 0.9245351611595899 62 AMTR_s00020p00246930 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00020.118 0.9242870196615373 46 AMTR_s00104p00047630 Disease resistance protein RPS2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.12 0.9241167879736528 47 AMTR_s00006p00256440 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component evm_27.TU.AmTr_v1.0_scaffold00006.192 0.9240071937882899 48 AMTR_s00013p00135450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00013.66 0.9239909739103778 49 AMTR_s00071p00144670 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00071.130 0.9236799312799537 50 AMTR_s00049p00084680 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT serine O-alpha-galactosyltransferase evm_27.TU.AmTr_v1.0_scaffold00049.55 0.9232411141119707 51 AMTR_s00012p00097440 evm_27.TU.AmTr_v1.0_scaffold00012.51 0.9229380894518829 52 AMTR_s00004p00140970 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.137 0.9228944697925191 53 AMTR_s00047p00175730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00047.99 0.9225291956245101 54 AMTR_s00175p00051190 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00175.23 0.922055810737251 55 AMTR_s00002p00269010 evm_27.TU.AmTr_v1.0_scaffold00002.545 0.921626055520695 56 AMTR_s00072p00168660 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS54 GARP-specific component evm_27.TU.AmTr_v1.0_scaffold00072.118 0.9214163108040773 57 AMTR_s00062p00113470 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.93 0.9212922492035835 58 AMTR_s00032p00063530 evm_27.TU.AmTr_v1.0_scaffold00032.40 0.9210910336693142 98 AMTR_s00025p00031700 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.12 0.9210596246359206 92 AMTR_s00017p00239150 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.210 0.9209787223427084 75 AMTR_s00014p00253620 evm_27.TU.AmTr_v1.0_scaffold00014.137 0.9207016079969514 62 AMTR_s00111p00041460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3a component evm_27.TU.AmTr_v1.0_scaffold00111.21 0.9205921720884059 63 AMTR_s00036p00195200 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00036.108 0.9205618012781798 64 AMTR_s00003p00212560 evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9200892435780267 65 AMTR_s00056p00165600 Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.145 0.9200859742789601 66 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9200421552844916 67 AMTR_s00137p00063430 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00137.24 0.9200343389177874 90 AMTR_s00025p00149970 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG4-XRCC4 ligase complex.LIG4 DNA ligase component evm_27.TU.AmTr_v1.0_scaffold00025.169 0.9200003169713288 69 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00086.104 0.9198725906346906 80 AMTR_s00040p00210200 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component evm_27.TU.AmTr_v1.0_scaffold00040.222 0.919625230091307 71 AMTR_s00022p00154500 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.156 0.9195940654491395 72 AMTR_s00113p00130190 evm_27.TU.AmTr_v1.0_scaffold00113.30 0.9195223892276398 73 AMTR_s00059p00133780 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.DGL1 component evm_27.TU.AmTr_v1.0_scaffold00059.112 0.9192348687417976 74 AMTR_s00055p00196140 Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.133 0.9190062807099754 75 AMTR_s00002p00271330 Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.622 0.9189253796228098 77 AMTR_s00142p00013680 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit evm_27.TU.AmTr_v1.0_scaffold00142.4 0.9187600262913079 77 AMTR_s00065p00132670 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00065.87 0.9185108625385197 78 AMTR_s00077p00108970 evm_27.TU.AmTr_v1.0_scaffold00077.94 0.9183303362607151 79 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9181980258951217 80 AMTR_s00155p00036470 evm_27.TU.AmTr_v1.0_scaffold00155.17 0.9181683065085581 81 AMTR_s00004p00046450 RNA processing.RNA decay.deadenylation-dependent mechanism.XRN4 exoribonuclease evm_27.TU.AmTr_v1.0_scaffold00004.30 0.9180558547852129 82 AMTR_s00032p00225290 evm_27.TU.AmTr_v1.0_scaffold00032.241 0.9179339912119264 83 AMTR_s00036p00205320 Protein degradation.peptidase families.metallopeptidase activities.M16 families.PQQL-like peptidase evm_27.TU.AmTr_v1.0_scaffold00036.122 0.9176489112467802 84 AMTR_s00033p00216190 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein evm_27.TU.AmTr_v1.0_scaffold00033.191 0.9169392806376409 85 AMTR_s00021p00078920 Protein modification.phosphorylation.SCY1 kinase evm_27.TU.AmTr_v1.0_scaffold00021.35 0.9165842528211632 86 AMTR_s00148p00070260 Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.44 0.9164304084283484 88 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.9162933446360091 89 AMTR_s00009p00114640 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00009.56 0.9160981220425544 90 AMTR_s00024p00181670 E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica evm_27.TU.AmTr_v1.0_scaffold00024.144 0.9158735438637835 91 AMTR_s00048p00207080 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-D cofactor evm_27.TU.AmTr_v1.0_scaffold00048.181 0.9155242741402163 92 AMTR_s00024p00216120 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP7 assembly factor evm_27.TU.AmTr_v1.0_scaffold00024.201 0.9154486224271696 93 AMTR_s00110p00146400 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.121 0.9146448727722746 94 AMTR_s00029p00208280 Cell wall.sporopollenin.exine wall formation.DEX1 exine patterning factor evm_27.TU.AmTr_v1.0_scaffold00029.300 0.914633320802097 95 AMTR_s00032p00047690 evm_27.TU.AmTr_v1.0_scaffold00032.26 0.9145815498279173 96 AMTR_s00079p00078710 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor evm_27.TU.AmTr_v1.0_scaffold00079.26 0.9145607232571471 97 AMTR_s00101p00092980 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.70 0.9145179903899576 98 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9144756726656139 100