Sequence Description Alias PCC hrr AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9462642224280264 4 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00147.15 0.940166168635386 7 AMTR_s00147p00076810 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-delta evm_27.TU.AmTr_v1.0_scaffold00147.36 0.9344844625877785 3 AMTR_s00022p00154500 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.156 0.9340742531329751 4 AMTR_s00209p00023450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00209.4 0.9334830728351321 5 AMTR_s00049p00084680 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT serine O-alpha-galactosyltransferase evm_27.TU.AmTr_v1.0_scaffold00049.55 0.93246580562507 6 AMTR_s00007p00259060 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.316 0.9315652599474772 7 AMTR_s00061p00180830 Protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.199 0.9298978358994174 8 AMTR_s00049p00219600 evm_27.TU.AmTr_v1.0_scaffold00049.255 0.927863362622614 9 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9274169188077852 33 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.9267293875342562 11 AMTR_s00016p00255950 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00016.338 0.9244685030569011 12 AMTR_s00099p00018620 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component evm_27.TU.AmTr_v1.0_scaffold00099.5 0.9243785835885036 13 AMTR_s00066p00145760 evm_27.TU.AmTr_v1.0_scaffold00066.147 0.9240081633243649 14 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9227884489325507 95 AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00003.89 0.9220589730655753 43 AMTR_s00071p00153630 Ran-binding protein M homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.142 0.9216916677612115 17 AMTR_s00041p00123630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component evm_27.TU.AmTr_v1.0_scaffold00041.92 0.9216489300129013 18 AMTR_s00046p00164820 Protein modification.acetylation.NatC-type N-terminal acetylase complex.NAA35 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00046.88 0.9207550912380138 26 AMTR_s00019p00231450 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component evm_27.TU.AmTr_v1.0_scaffold00019.317 0.9201484431247424 20 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9196846996560578 34 AMTR_s00038p00088230 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00038.43 0.9196593645038948 22 AMTR_s00069p00119460 Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.80 0.919501178623775 31 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.9194706573788468 25 AMTR_s00111p00073020 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.arc lamp subcomplex.APC8 component evm_27.TU.AmTr_v1.0_scaffold00111.44 0.9183493601785826 25 AMTR_s00113p00130190 evm_27.TU.AmTr_v1.0_scaffold00113.30 0.9182637387023082 26 AMTR_s00006p00264510 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB5 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00006.267 0.9174178090757987 27 AMTR_s00111p00041460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3a component evm_27.TU.AmTr_v1.0_scaffold00111.21 0.916669378450554 28 AMTR_s00059p00105450 evm_27.TU.AmTr_v1.0_scaffold00059.80 0.9155261776949369 29 AMTR_s00062p00113470 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.93 0.9151455429072346 30 AMTR_s00101p00092980 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.70 0.9150333701223697 31 AMTR_s00010p00086200 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component evm_27.TU.AmTr_v1.0_scaffold00010.48 0.9147081274638136 34 AMTR_s00076p00078090 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.20 0.9137399226798925 33 AMTR_s00021p00078920 Protein modification.phosphorylation.SCY1 kinase evm_27.TU.AmTr_v1.0_scaffold00021.35 0.9128689479160814 34 AMTR_s00003p00020850 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.6 0.9128186594777425 67 AMTR_s00183p00029940 evm_27.TU.AmTr_v1.0_scaffold00183.8 0.9128183007800166 36 AMTR_s00010p00226160 evm_27.TU.AmTr_v1.0_scaffold00010.253 0.9121970921537217 37 AMTR_s00072p00168660 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS54 GARP-specific component evm_27.TU.AmTr_v1.0_scaffold00072.118 0.911799612255939 38 AMTR_s00062p00040090 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DAWDLE pri-miRNA-DCL1 association factor evm_27.TU.AmTr_v1.0_scaffold00062.21 0.9108251091252421 39 AMTR_s00109p00054710 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit B evm_27.TU.AmTr_v1.0_scaffold00109.40 0.9104198514497619 40 AMTR_s00109p00082150 Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.MFP multifunctional enzyme evm_27.TU.AmTr_v1.0_scaffold00109.66 0.9100325478659206 57 AMTR_s00066p00084950 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.66 0.9096829153887637 46 AMTR_s00047p00175730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00047.99 0.9096134493124488 60 AMTR_s00006p00256440 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component evm_27.TU.AmTr_v1.0_scaffold00006.192 0.9095395871608583 44 AMTR_s00036p00173790 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00036.85 0.9084690338518597 75 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9084041234473247 77 AMTR_s00064p00050700 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).DDX5 pre-mRNA splicing regulator evm_27.TU.AmTr_v1.0_scaffold00064.11 0.9083522270988718 47 AMTR_s00059p00133780 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.DGL1 component evm_27.TU.AmTr_v1.0_scaffold00059.112 0.9083217707623125 75 AMTR_s00099p00129340 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor evm_27.TU.AmTr_v1.0_scaffold00099.115 0.9081318276756887 60 AMTR_s00012p00234420 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component evm_27.TU.AmTr_v1.0_scaffold00012.192 0.9080379625307846 66 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00122.38 0.9078226836231554 80 AMTR_s00107p00047780 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.NUP93 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00107.18 0.9073468988319231 52 AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.9070264283832352 53 AMTR_s00014p00253620 evm_27.TU.AmTr_v1.0_scaffold00014.137 0.9068216994650506 54 AMTR_s00071p00123130 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00071.99 0.9067798040197143 55 AMTR_s00011p00229900 evm_27.TU.AmTr_v1.0_scaffold00011.109 0.9054737132022932 74 AMTR_s00041p00134980 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTA component evm_27.TU.AmTr_v1.0_scaffold00041.95 0.9050640439554369 58 AMTR_s00166p00033890 Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00166.16 0.9040864545738911 59 AMTR_s00024p00181670 E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica evm_27.TU.AmTr_v1.0_scaffold00024.144 0.9038384833729805 60 AMTR_s00001p00246890 evm_27.TU.AmTr_v1.0_scaffold00001.300 0.9035277432689534 61 AMTR_s00111p00143180 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.123 0.9031721192770173 62 AMTR_s00001p00229100 RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF64/Rna15 component evm_27.TU.AmTr_v1.0_scaffold00001.240 0.9029170533821657 63 AMTR_s00039p00228400 evm_27.TU.AmTr_v1.0_scaffold00039.211 0.902783745710676 64 AMTR_s00105p00039650 evm_27.TU.AmTr_v1.0_scaffold00105.16 0.9026740250893789 65 AMTR_s00061p00061880 Actin-related protein 8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.37 0.9025413973534246 66 AMTR_s00029p00208280 Cell wall.sporopollenin.exine wall formation.DEX1 exine patterning factor evm_27.TU.AmTr_v1.0_scaffold00029.300 0.9014370559857331 82 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component evm_27.TU.AmTr_v1.0_scaffold00012.260 0.9011571761169561 68 AMTR_s00036p00071330 Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.25 0.9011223043036297 91 AMTR_s00149p00026500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit evm_27.TU.AmTr_v1.0_scaffold00149.8 0.9010699958433794 70 AMTR_s00062p00159540 DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.149 0.9010211672132786 71 AMTR_s00143p00058740 evm_27.TU.AmTr_v1.0_scaffold00143.13 0.9004221530522317 73 AMTR_s00106p00013240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.SWA2/NOC1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00106.3 0.8995609775635891 75 AMTR_s00001p00270540 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00001.464 0.8993068095130594 77 AMTR_s00009p00247290 Phytohormones.jasmonic acid.synthesis.acyl-CoA thioesterase evm_27.TU.AmTr_v1.0_scaffold00009.243 0.8991212405393939 78 AMTR_s00016p00145050 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT4 delta subunit evm_27.TU.AmTr_v1.0_scaffold00016.100 0.8983967648025164 81 AMTR_s00007p00264760 evm_27.TU.AmTr_v1.0_scaffold00007.353 0.8983550966915755 82 AMTR_s00092p00100450 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.SPS3 solanesyl diphosphate synthase evm_27.TU.AmTr_v1.0_scaffold00092.58 0.898325688428709 83 AMTR_s00058p00176500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT3 gamma subunit evm_27.TU.AmTr_v1.0_scaffold00058.166 0.8976775122060794 85 AMTR_s00109p00056900 La protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.42 0.8974177710948266 86 AMTR_s00086p00132870 evm_27.TU.AmTr_v1.0_scaffold00086.75 0.8973694945573228 87 AMTR_s00002p00090480 evm_27.TU.AmTr_v1.0_scaffold00002.47 0.8971854358439142 89 AMTR_s00028p00065140 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP42 component evm_27.TU.AmTr_v1.0_scaffold00028.12 0.8965072708703454 92 AMTR_s00071p00125410 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00071.102 0.8962356079668071 93 AMTR_s00086p00025730 Protoheme IX farnesyltransferase, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00086.8 0.8954002962904068 94 AMTR_s00114p00022520 ACT domain-containing protein ACR12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00114.8 0.8952147718873776 95 AMTR_s00039p00218660 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.alpha subcomplex.NDUFA9 component evm_27.TU.AmTr_v1.0_scaffold00039.189 0.894545717660346 96 AMTR_s00078p00190750 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.Hsp110 protein evm_27.TU.AmTr_v1.0_scaffold00078.198 0.8945053327574108 97 AMTR_s00029p00094300 RNA processing.RNA quality control Exon Junction complex (EJC).core components.eIF4A3 helicase component evm_27.TU.AmTr_v1.0_scaffold00029.87 0.8944875810014652 98