Sequence Description Alias PCC hrr AMTR_s00148p00070910 Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.45 0.9789116099568675 1 AMTR_s00197p00038370 evm_27.TU.AmTr_v1.0_scaffold00197.18 0.9675219137726351 2 AMTR_s00008p00266190 evm_27.TU.AmTr_v1.0_scaffold00008.227 0.9662840046631646 3 AMTR_s00083p00130670 Protein modification.phosphorylation.STE kinase superfamily.MAPKK kinase evm_27.TU.AmTr_v1.0_scaffold00083.35 0.9627811215888185 4 AMTR_s00007p00224640 GTP-binding protein At2g22870 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.219 0.9617890466748483 5 AMTR_s00095p00033450 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.LAS1 pre-rRNA cleavage factor evm_27.TU.AmTr_v1.0_scaffold00095.14 0.9617868672359192 6 AMTR_s00049p00016550 evm_27.TU.AmTr_v1.0_scaffold00049.6 0.9609647442850859 7 AMTR_s00002p00261540 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.453 0.9602074611718883 8 AMTR_s00047p00213160 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT1/2 type-I splicing factor evm_27.TU.AmTr_v1.0_scaffold00047.154 0.9592480718518169 9 AMTR_s00023p00193470 Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.133 0.9570658781781402 10 AMTR_s00004p00160120 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC1 component evm_27.TU.AmTr_v1.0_scaffold00004.172 0.9566149090283697 11 AMTR_s00008p00203110 Protein argonaute 4A OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00008.122 0.9527222843687532 12 AMTR_s00078p00149090 RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.125 0.9504101141725029 13 AMTR_s00025p00131930 evm_27.TU.AmTr_v1.0_scaffold00025.131 0.9500897921856043 14 AMTR_s00021p00171430 evm_27.TU.AmTr_v1.0_scaffold00021.124 0.9494788299159533 15 AMTR_s00008p00203230 Protein argonaute 16 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00008.123 0.9493861215197564 16 AMTR_s00068p00202400 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00068.176 0.9493738167065839 17 AMTR_s00045p00062170 RNA processing.RNA modification.rRNA/tRNA methylation.TRM13 tRNA adenosine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00045.45 0.949189332515294 18 AMTR_s00003p00270420 0.9482085487197035 19 AMTR_s00002p00259560 Nucleotide metabolism.purines.salvage pathway.AMP deaminase activities.membrane-associated AMP deaminase evm_27.TU.AmTr_v1.0_scaffold00002.437 0.9478533978435126 20 AMTR_s00095p00123830 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.80 0.9476809230003485 21 AMTR_s00012p00226630 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.IDN/IDP regulatory protein evm_27.TU.AmTr_v1.0_scaffold00012.177 0.9472502232093246 22 AMTR_s00026p00051870 RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator complex.DRB7 component evm_27.TU.AmTr_v1.0_scaffold00026.17 0.9471256372617498 23 AMTR_s00019p00245720 evm_27.TU.AmTr_v1.0_scaffold00019.382 0.9466177336056046 24 AMTR_s00085p00149180 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.DNA helicase (RCK/MER3) evm_27.TU.AmTr_v1.0_scaffold00085.93 0.9462192415844705 25 AMTR_s00025p00178950 evm_27.TU.AmTr_v1.0_scaffold00025.215 0.9461274551113268 26 AMTR_s00066p00131520 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.125 0.9456940406942758 27 AMTR_s00044p00041520 evm_27.TU.AmTr_v1.0_scaffold00044.15 0.9450559093611877 28 AMTR_s00002p00270610 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade J phosphatase evm_27.TU.AmTr_v1.0_scaffold00002.591 0.9441108497298157 29 AMTR_s00032p00190520 Protein degradation.ER-associated protein degradation (ERAD) machinery.PNG1 peptide:N-glycanase evm_27.TU.AmTr_v1.0_scaffold00032.172 0.9437259126768196 30 AMTR_s00002p00236270 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00002.278 0.9437198346136317 31 AMTR_s00004p00117700 RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator complex.DRB4 component evm_27.TU.AmTr_v1.0_scaffold00004.100 0.9436403395804275 32 AMTR_s00033p00127000 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00033.66 0.9435682459353184 33 AMTR_s00146p00080830 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00146.48 0.9418309799452359 34 AMTR_s00084p00090740 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-1 motor protein evm_27.TU.AmTr_v1.0_scaffold00084.26 0.941593370428468 35 AMTR_s00039p00125380 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor evm_27.TU.AmTr_v1.0_scaffold00039.79 0.9406600209289463 36 AMTR_s00045p00163960 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.RPAP3 polymerase- II regulator protein evm_27.TU.AmTr_v1.0_scaffold00045.188 0.9405458574056427 37 AMTR_s00103p00089080 Protein degradation.peptidase families.metallopeptidase activities.M16 families.Nardilysin-like peptidase evm_27.TU.AmTr_v1.0_scaffold00103.49 0.9403263644555108 38 AMTR_s00040p00198390 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.199 0.9402914483661625 39 AMTR_s00019p00242350 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC1/Tau95 component evm_27.TU.AmTr_v1.0_scaffold00019.357 0.9402615136578766 40 AMTR_s00003p00270010 Cellular respiration.oxidative phosphorylation.alternative NAD(P)H dehydrogenase activities.type-II NAD(P)H dehydrogenase activities.NDB-type NAD(P)H dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00003.424 0.9397131861267215 41 AMTR_s00001p00273020 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00001.586 0.9396249159755905 45 AMTR_s00040p00043760 evm_27.TU.AmTr_v1.0_scaffold00040.20 0.9394492113797077 43 AMTR_s00049p00176850 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.RGS1 G-protein immune signalling regulator evm_27.TU.AmTr_v1.0_scaffold00049.169 0.939438919986981 44 AMTR_s00078p00067180 Pentatricopeptide repeat-containing protein At2g46050, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.40 0.9390750450344335 45 AMTR_s00042p00025510 Chromatin organisation.histone modifications.histone arginine methylation.TDRD3-TOP3B methyl-arginine reader complex.TDRD3 reader component evm_27.TU.AmTr_v1.0_scaffold00042.5 0.9378974312715599 46 AMTR_s00044p00141100 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.NOC4 assembly factor evm_27.TU.AmTr_v1.0_scaffold00044.137 0.9378368416815251 47 AMTR_s00003p00202580 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00003.190 0.9377942312134357 48 AMTR_s00109p00125940 External stimuli response.biotic stress.pathogen effector.NLR effector receptor 0.9372663928221163 49 AMTR_s00047p00206550 evm_27.TU.AmTr_v1.0_scaffold00047.141 0.9370270423558908 50 AMTR_s00045p00091940 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.85 0.9368947560935242 51 AMTR_s00149p00069080 DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00149.47 0.9367681015863938 52 AMTR_s00109p00094190 Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.80 0.9365660700871915 53 AMTR_s00021p00237290 Uncharacterized protein At4g10930 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.243 0.9363073400991833 54 AMTR_s00024p00204830 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.187 0.9362430797696873 55 AMTR_s00009p00265760 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.TFB2-type subunit evm_27.TU.AmTr_v1.0_scaffold00009.387 0.9361462616475171 56 AMTR_s00045p00192570 B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.243 0.9356127551060636 57 AMTR_s00009p00251110 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.2 protease evm_27.TU.AmTr_v1.0_scaffold00009.258 0.9354540554063419 58 AMTR_s00149p00057710 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).Ku70-Ku80 helicase complex.KU80 component evm_27.TU.AmTr_v1.0_scaffold00149.36 0.9351127731950308 59 AMTR_s00004p00118340 evm_27.TU.AmTr_v1.0_scaffold00004.101 0.9345243466128835 60 AMTR_s00067p00129330 Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.111 0.9341793138903977 61 AMTR_s00138p00085700 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.CASP-type golgin evm_27.TU.AmTr_v1.0_scaffold00138.45 0.93387688642435 62 AMTR_s00090p00083520 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp22 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00090.29 0.9334208322592424 63 AMTR_s00037p00234680 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5-like chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00037.154 0.9330375097818449 64 AMTR_s00106p00113730 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC6 component evm_27.TU.AmTr_v1.0_scaffold00106.86 0.9329798977877624 65 AMTR_s00059p00131310 Methyltransferase-like protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.108 0.9329735304463974 71 AMTR_s00061p00106080 evm_27.TU.AmTr_v1.0_scaffold00061.82 0.9329252030473728 67 AMTR_s00109p00079620 RNA processing.ribonuclease activities.RNase P ribonuclease activities.protein-only RNase P evm_27.TU.AmTr_v1.0_scaffold00109.62 0.9328802106011377 68 AMTR_s00024p00238810 evm_27.TU.AmTr_v1.0_scaffold00024.273 0.9308798130807259 69 AMTR_s00058p00120430 evm_27.TU.AmTr_v1.0_scaffold00058.82 0.9307007897298005 70 AMTR_s00104p00038340 Nuclear pore complex protein NUP205 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.6 0.9298469495581716 71 AMTR_s00029p00245320 SMR domain-containing protein At5g58720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.436 0.9297615752640658 72 AMTR_s00027p00231240 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) evm_27.TU.AmTr_v1.0_scaffold00027.113 0.9296272122524589 73 AMTR_s00155p00036470 evm_27.TU.AmTr_v1.0_scaffold00155.17 0.928886502432901 74 AMTR_s00094p00104260 Cytochrome P450 97B2, chloroplastic OS=Glycine max evm_27.TU.AmTr_v1.0_scaffold00094.9 0.9288022848410482 75 AMTR_s00019p00249820 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIe basal transcription factor complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00019.403 0.928796471934726 76 AMTR_s00072p00182810 B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00072.131 0.9286072194996634 77 AMTR_s00002p00268330 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase) evm_27.TU.AmTr_v1.0_scaffold00002.535 0.9282678001460773 78 AMTR_s00171p00062290 evm_27.TU.AmTr_v1.0_scaffold00171.46 0.9274463168960202 79 AMTR_s00003p00269660 evm_27.TU.AmTr_v1.0_scaffold00003.413 0.9266786721987664 80 AMTR_s00063p00176210 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter evm_27.TU.AmTr_v1.0_scaffold00063.57 0.9262558020738106 81 AMTR_s00048p00228530 Protein modification.phosphorylation.TKL kinase superfamily.LRR-XIII kinase families.LRR-XIIIa kinase evm_27.TU.AmTr_v1.0_scaffold00048.222 0.9260533518068041 82 AMTR_s00092p00143460 evm_27.TU.AmTr_v1.0_scaffold00092.112 0.9259136161230378 83 AMTR_s00109p00063750 Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.49 0.925911929640902 84 AMTR_s00066p00206210 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.282 0.9254014626861033 85 AMTR_s00052p00146690 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component evm_27.TU.AmTr_v1.0_scaffold00052.52 0.9252812557802379 86 AMTR_s00169p00027470 Cell cycle.interphase.DNA replication.telomere replication.telomere integrity maintenance complex.CTC1 component evm_27.TU.AmTr_v1.0_scaffold00169.14 0.9251583985230221 87 AMTR_s00042p00136580 evm_27.TU.AmTr_v1.0_scaffold00042.33 0.9240868790058326 88 AMTR_s00119p00129000 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.NUFIP assembly factor evm_27.TU.AmTr_v1.0_scaffold00119.102 0.9240293882510611 89 AMTR_s00081p00144410 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00081.55 0.9236946074965278 90 AMTR_s00171p00062850 evm_27.TU.AmTr_v1.0_scaffold00171.47 0.9234393859745716 91 AMTR_s00026p00019230 DNA repair protein UVH3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00026.2 0.9232811051697496 98 AMTR_s00066p00157030 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00066.162 0.9230239202932283 93 AMTR_s00008p00040610 evm_27.TU.AmTr_v1.0_scaffold00008.13 0.9229182175008446 94 AMTR_s00008p00223790 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP6/CTR9 component evm_27.TU.AmTr_v1.0_scaffold00008.143 0.9226742067407873 95 AMTR_s00010p00217940 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL30 component evm_27.TU.AmTr_v1.0_scaffold00010.226 0.9226057621717343 96 AMTR_s00049p00203600 Phytohormones.jasmonic acid.synthesis.13-lipoxygenase evm_27.TU.AmTr_v1.0_scaffold00049.220 0.9224874108411993 97 AMTR_s00029p00049810 Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.38 0.9224735725214818 98 AMTR_s00025p00136600 Redox homeostasis.low-molecular-weight scavengers.glutathione metabolism.glutathione biosynthesis.glutathione synthetase (GS) evm_27.TU.AmTr_v1.0_scaffold00025.140 0.9223483245080278 99 AMTR_s00011p00029200 evm_27.TU.AmTr_v1.0_scaffold00011.5 0.922333830506172 100