Sequence Description Alias PCC hrr AMTR_s00011p00243170 Transcription factor GTE6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.139 0.9188236348804876 8 AMTR_s00021p00206430 evm_27.TU.AmTr_v1.0_scaffold00021.176 0.9166967892563329 6 AMTR_s00041p00194980 DNA damage response.BRCC DNA-damage response complex.BRCC45 component evm_27.TU.AmTr_v1.0_scaffold00041.172 0.9151688682888935 3 AMTR_s00024p00181670 E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica evm_27.TU.AmTr_v1.0_scaffold00024.144 0.9134102910952543 14 AMTR_s00018p00217640 RNA processing.RNA 5-end cap adding.mRNA capping enzyme evm_27.TU.AmTr_v1.0_scaffold00018.140 0.9111502881524753 7 AMTR_s00036p00219140 evm_27.TU.AmTr_v1.0_scaffold00036.153 0.9100445383495132 9 AMTR_s00025p00231520 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.CG1 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00025.337 0.9084658502652397 22 AMTR_s00039p00206760 RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP30/POP2 component evm_27.TU.AmTr_v1.0_scaffold00039.174 0.9079572371629439 8 AMTR_s00041p00173130 Multi-process regulation.circadian clock.FIO1 circadian clock regulator evm_27.TU.AmTr_v1.0_scaffold00041.129 0.9066772542079125 12 AMTR_s00057p00038540 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00057.18 0.9052834521199161 11 AMTR_s00022p00062370 evm_27.TU.AmTr_v1.0_scaffold00022.41 0.9026257307775978 11 AMTR_s00004p00168920 Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.187 0.9020846504805239 12 AMTR_s00019p00253350 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-I alpha-mannosidase I evm_27.TU.AmTr_v1.0_scaffold00019.426 0.9015567776607213 14 AMTR_s00148p00070260 Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.44 0.9012729323132581 14 AMTR_s00021p00243200 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component evm_27.TU.AmTr_v1.0_scaffold00021.258 0.900963330147803 15 AMTR_s00007p00199090 evm_27.TU.AmTr_v1.0_scaffold00007.172 0.8953969773830047 16 AMTR_s00064p00153650 evm_27.TU.AmTr_v1.0_scaffold00064.63 0.8943266601128769 17 AMTR_s00010p00058910 RNA processing.organelle machineries.RNA editing.ORRM-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00010.32 0.8942252166821103 48 AMTR_s00247p00015290 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.classical PTP phosphatase evm_27.TU.AmTr_v1.0_scaffold00247.3 0.893161561117809 79 AMTR_s00067p00136180 Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica 0.8921665646807794 72 AMTR_s00007p00264760 evm_27.TU.AmTr_v1.0_scaffold00007.353 0.8916563903619722 33 AMTR_s00030p00182140 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase evm_27.TU.AmTr_v1.0_scaffold00030.113 0.8901260715238739 26 AMTR_s00040p00182290 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.HDA9 component evm_27.TU.AmTr_v1.0_scaffold00040.176 0.8899385249973013 67 AMTR_s00001p00270140 Oligoribonuclease OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.458 0.8892642496246299 25 AMTR_s00053p00089490 Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.44 0.887332753015665 49 AMTR_s00062p00203310 Protein modification.disulfide bond formation.endoplasmic reticulum.protein disulfide isomerase (PDI8) evm_27.TU.AmTr_v1.0_scaffold00062.215 0.8867233727076385 28 AMTR_s00108p00150280 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.P58 Hsp70-co-chaperone evm_27.TU.AmTr_v1.0_scaffold00108.50 0.8859371796441002 29 AMTR_s00093p00102680 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26c component evm_27.TU.AmTr_v1.0_scaffold00093.33 0.8855260259336747 30 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor evm_27.TU.AmTr_v1.0_scaffold00101.112 0.8844996301688033 57 AMTR_s00053p00166720 evm_27.TU.AmTr_v1.0_scaffold00053.113 0.8842245567685664 33 AMTR_s00071p00022960 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.Sdo1 maturation factor evm_27.TU.AmTr_v1.0_scaffold00071.10 0.8837236637550918 34 AMTR_s00004p00077740 evm_27.TU.AmTr_v1.0_scaffold00004.60 0.8821483423064087 36 AMTR_s00138p00017550 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.MON1-CCZ1 RAB7 guanine nucleotide exchange factor complex.CCZ1 component evm_27.TU.AmTr_v1.0_scaffold00138.3 0.8817002990873088 37 AMTR_s00087p00135370 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component evm_27.TU.AmTr_v1.0_scaffold00087.43 0.8814751869145454 38 AMTR_s00021p00164610 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX-type) evm_27.TU.AmTr_v1.0_scaffold00021.119 0.8813947889968585 39 AMTR_s00016p00019360 evm_27.TU.AmTr_v1.0_scaffold00016.6 0.880511747907376 40 AMTR_s00023p00252370 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP2) evm_27.TU.AmTr_v1.0_scaffold00023.248 0.8804531130056195 72 AMTR_s00009p00260200 evm_27.TU.AmTr_v1.0_scaffold00009.319 0.8801849063301012 65 AMTR_s00110p00142760 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.nMAT1/2 type-I splicing factor evm_27.TU.AmTr_v1.0_scaffold00110.117 0.8800799812370385 43 AMTR_s00109p00043470 evm_27.TU.AmTr_v1.0_scaffold00109.30 0.879938263805258 44 AMTR_s00045p00178420 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS51/UNH component evm_27.TU.AmTr_v1.0_scaffold00045.216 0.8787966745686859 46 AMTR_s00009p00256060 evm_27.TU.AmTr_v1.0_scaffold00009.284 0.8786777133419007 48 AMTR_s00101p00090190 NAP1-related protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.66 0.8781422615069411 48 AMTR_s00002p00207490 evm_27.TU.AmTr_v1.0_scaffold00002.209 0.8780713485395948 97 AMTR_s00077p00102160 Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.85 0.8779968193449944 56 AMTR_s00045p00170740 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP3 component evm_27.TU.AmTr_v1.0_scaffold00045.203 0.877476172515487 51 AMTR_s00029p00053440 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.accessory component (RHL1) evm_27.TU.AmTr_v1.0_scaffold00029.44 0.8771386071382762 52 AMTR_s00021p00112470 Vesicle trafficking.autophagosome formation.cargo recruitment.ATI3 autophagic adapter protein evm_27.TU.AmTr_v1.0_scaffold00021.60 0.8767955430052985 53 AMTR_s00182p00050050 Protein degradation.peptidase families.serine-type peptidase activities.S28 serine carboxypeptidase evm_27.TU.AmTr_v1.0_scaffold00182.30 0.8766751402843713 54 AMTR_s00023p00236700 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED4 component evm_27.TU.AmTr_v1.0_scaffold00023.196 0.8765107144377087 55 AMTR_s00025p00098730 evm_27.TU.AmTr_v1.0_scaffold00025.81 0.874311992751874 56 AMTR_s00006p00083160 evm_27.TU.AmTr_v1.0_scaffold00006.30 0.8738543278535722 57 AMTR_s00072p00173000 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.ENP1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00072.122 0.8738427382055606 58 AMTR_s00029p00078080 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.STT3 component evm_27.TU.AmTr_v1.0_scaffold00029.71 0.8728602890097911 60 AMTR_s00005p00222320 Protoporphyrinogen oxidase 2 OS=Spinacia oleracea evm_27.TU.AmTr_v1.0_scaffold00005.96 0.8725955416740264 61 AMTR_s00001p00126200 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease evm_27.TU.AmTr_v1.0_scaffold00001.101 0.8715351378527579 62 AMTR_s00024p00244020 G-protein coupled receptor 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.298 0.870509751990232 64 AMTR_s00009p00255220 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class theta evm_27.TU.AmTr_v1.0_scaffold00009.278 0.8691171626347124 67 AMTR_s00071p00172900 evm_27.TU.AmTr_v1.0_scaffold00071.175 0.8690919575927833 68 AMTR_s00056p00107780 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00056.81 0.8690161589963966 69 AMTR_s00039p00202100 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS5 component evm_27.TU.AmTr_v1.0_scaffold00039.167 0.8688974894097848 70 AMTR_s00007p00078630 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS18 component evm_27.TU.AmTr_v1.0_scaffold00007.43 0.8685519768025991 73 AMTR_s00012p00240300 evm_27.TU.AmTr_v1.0_scaffold00012.213 0.8683562019769252 74 AMTR_s00061p00208140 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.PARN poly(A)-specific ribonuclease evm_27.TU.AmTr_v1.0_scaffold00061.257 0.8670425005942624 83 AMTR_s00067p00028100 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim44 component evm_27.TU.AmTr_v1.0_scaffold00067.13 0.866433992997962 77 AMTR_s00038p00191060 Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.134 0.8660493696385765 79 AMTR_s00022p00075230 Protein Iojap, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.55 0.865799349344994 80 AMTR_s00871p00002780 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00871.1 0.8657753315306923 81 AMTR_s00010p00163740 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component evm_27.TU.AmTr_v1.0_scaffold00010.126 0.8654572738175357 82 AMTR_s00146p00087440 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim50 component evm_27.TU.AmTr_v1.0_scaffold00146.55 0.8652602493549459 83 AMTR_s00020p00243160 evm_27.TU.AmTr_v1.0_scaffold00020.110 0.8647781508676151 84 AMTR_s00125p00104110 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.Hsp40 Hsp70-co-chaperone evm_27.TU.AmTr_v1.0_scaffold00125.25 0.8645553168393266 86 AMTR_s00007p00253380 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN2/QQT1 nuclear import factor evm_27.TU.AmTr_v1.0_scaffold00007.293 0.8644934453347899 87 AMTR_s00126p00067580 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00126.26 0.8633507956593267 88 AMTR_s00129p00124210 RNA biosynthesis.transcriptional activation.bHLH transcription factor evm_27.TU.AmTr_v1.0_scaffold00129.99 0.8632150067627137 89 AMTR_s00033p00178090 Protein degradation.ER-associated protein degradation (ERAD) machinery.OS9 component evm_27.TU.AmTr_v1.0_scaffold00033.130 0.862821085325731 91 AMTR_s00053p00155220 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor evm_27.TU.AmTr_v1.0_scaffold00053.103 0.8626796517439607 92 AMTR_s00103p00136100 evm_27.TU.AmTr_v1.0_scaffold00103.88 0.8626592112239402 93 AMTR_s00045p00126290 Probable phosphoinositide phosphatase SAC9 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.124 0.8622865357524084 95 AMTR_s00061p00156200 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL11 component evm_27.TU.AmTr_v1.0_scaffold00061.143 0.8617121313544474 97 AMTR_s00009p00255140 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase evm_27.TU.AmTr_v1.0_scaffold00009.277 0.8615713215683886 99 AMTR_s00003p00049560 FIP1[V]-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.30 0.8615490508541535 100