Sequence Description Alias PCC hrr Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein 0.9424732026942005 1 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein 0.9394739504258695 2 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein 0.9342190925677021 3 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.9304533039624928 4 Cpa|evm.model.tig00020531.35 0.9283773320611087 6 Cpa|evm.model.tig00021464.27 0.9281989732822583 6 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein 0.9226889196902214 7 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit 0.9226690071522249 8 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii 0.916992699483097 29 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component 0.9161048733092011 21 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana 0.9157372482720414 35 Cpa|evm.model.tig00021348.94 0.9156561225819806 18 Cpa|evm.model.tig00021589.1 0.9134102430134728 24 Cpa|evm.model.tig00020544.4 0.913404223808264 25 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana 0.9128395045965108 23 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor 0.912823656400718 16 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase 0.9127631717692609 45 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) 0.9124791118815332 18 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase 0.9121881262056422 19 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit 0.9109906152937944 28 Cpa|evm.model.tig00000704.62 0.9102373801797251 21 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana 0.9096994409115883 28 Cpa|evm.model.tig00000076.86 0.9068401157282013 23 Cpa|evm.model.tig00001049.14 RNA biosynthesis.transcriptional activation.TUB transcription factor 0.9060836451807303 24 Cpa|evm.model.tig00021123.42 0.9054873111410608 25 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 0.9048744513480677 26 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component 0.9041327545791457 45 Cpa|evm.model.tig00020553.154 0.9038353125089458 28 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component 0.903785319189453 29 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component 0.9019077380437917 30 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component 0.9011053943322671 62 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana 0.9004232128897091 32 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.9000174632332454 45 Cpa|evm.model.tig00000704.54 Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana 0.8991589399116374 34 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase 0.8961769981279969 35 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component 0.8925412316848841 44 Cpa|evm.model.tig00020553.153 Lipid metabolism.sphingolipid metabolism.serine C-palmitoyltransferase complex.catalytic subunit 1 0.8920099950402444 37 Cpa|evm.model.tig00020684.33 RNA biosynthesis.transcriptional activation.CPP1-like transcription factor 0.8906021376656587 38 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component 0.8902033029949777 67 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component 0.889465192443722 40 Cpa|evm.model.tig00020554.15 0.8890774992999413 41 Cpa|evm.model.tig00021357.9 0.8890002058890915 42 Cpa|evm.model.tig00021464.16 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT1 regulatory component 0.8888448055529338 43 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter 0.8886428451915286 44 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.8881441740677163 45 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit 0.8875909234577363 46 Cpa|evm.model.tig00021589.5 Protein degradation.ER-associated protein degradation (ERAD) machinery.OS9 component 0.8870140118525571 47 Cpa|evm.model.tig00001029.14 0.8865385255469038 48 Cpa|evm.model.tig00020780.13 0.8857066436082484 49 Cpa|evm.model.tig00000912.18 0.8853208884056047 51 Cpa|evm.model.tig00020848.76 0.8847833971812439 51 Cpa|evm.model.tig00021319.35 0.8843977772820926 64 Cpa|evm.model.tig00021357.13 0.8833720978344415 53 Cpa|evm.model.tig00000980.1 0.8823426377681218 54 Cpa|evm.model.tig00020703.9 26S proteasome non-ATPase regulatory subunit 2 homolog A OS=Arabidopsis thaliana 0.8817170334738701 55 Cpa|evm.model.tig00000704.63 0.8817036841416628 56 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component 0.8815407875539139 59 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component 0.8813891602377636 62 Cpa|evm.model.tig00001229.22 GPN-loop GTPase QQT1 OS=Arabidopsis thaliana 0.8812448005826164 60 Cpa|evm.model.tig00021357.15 0.8812269937787892 61 Cpa|evm.model.tig00000241.37 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 4 0.8803979122554748 62 Cpa|evm.model.tig00000388.24 0.8799891071113702 63 Cpa|evm.model.tig00020554.11 Cytoplasmic dynein 2 light intermediate chain 1 OS=Chlamydomonas reinhardtii 0.8787116528400541 64 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component 0.8777064983563642 65 Cpa|evm.model.tig00020538.71 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component 0.8766869182865383 66 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase 0.8766600748194228 67 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana 0.8764786794345144 84 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana 0.876337659836969 69 Cpa|evm.model.tig00021612.44 0.8760320551660067 86 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana 0.8756544634648658 71 Cpa|evm.model.tig00000863.11 Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica 0.8755088871805808 72 Cpa|evm.model.tig00000789.36 Protein translocation.nucleus.nucleocytoplasmic transport.RanBP1 GTPase activation accessory protein 0.8750921707058803 73 Cpa|evm.model.tig00000829.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF2 component 0.8746009704393848 74 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.8745283472332648 75 Cpa|evm.model.tig00021319.34 0.8740543978280407 76 Cpa|evm.model.tig00021234.15 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED7 component 0.8739412203390177 77 Cpa|evm.model.tig00000863.32 0.8723336019378611 78 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer 0.8720765469562657 79 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component 0.87177240365471 80 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component 0.8715078094202431 81 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.8709608986284582 82 Cpa|evm.model.tig00021464.58 0.8708619284781919 83 Cpa|evm.model.tig00020538.66 0.8705212476174544 84 Cpa|evm.model.tig00000037.18 0.8700258522355298 85 Cpa|evm.model.tig00020918.9 0.8696004407776773 92 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease 0.8690048633718167 87 Cpa|evm.model.tig00000792.7 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) 0.8689036479950198 88 Cpa|evm.model.tig00001408.10 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase 0.868622271341512 89 Cpa|evm.model.tig00000704.26 0.8676698256328428 91 Cpa|evm.model.tig00000037.6 0.8669506978869443 98 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component 0.8668052218382726 93 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component 0.8666142948153744 95 Cpa|evm.model.tig00000042.6 0.8665671228452669 96 Cpa|evm.model.tig00021254.24 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP54 component 0.8663673209097226 97 Cpa|evm.model.tig00000217.34 0.8659282766042562 98 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component 0.8655515001685644 99 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit 0.8650928569094969 100