Sequence Description Alias PCC hrr Cpa|evm.model.tig00001049.12 0.9394739504258695 2 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.933112274222386 3 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component 0.9302934139302661 10 Cpa|evm.model.tig00021464.16 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT1 regulatory component 0.9282343087989993 4 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii 0.9225997637696753 22 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein 0.9189149398223547 11 Cpa|evm.model.tig00020848.78 0.9184134932780097 7 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase 0.9163940892022923 8 Cpa|evm.model.tig00000944.10 0.9161129274476627 9 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component 0.9122709828572027 10 Cpa|evm.model.tig00021348.94 0.9118002046871745 19 Cpa|evm.model.tig00021357.9 0.9101998076897523 12 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit 0.907559854525159 13 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana 0.9060211564866828 31 Cpa|evm.model.tig00020531.35 0.904970415066987 30 Cpa|evm.model.tig00000792.7 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) 0.9039518041479618 16 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component 0.9036367890953508 22 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component 0.9019569865618327 51 Cpa|evm.model.tig00000704.70 Intraflagellar transport protein 81 OS=Chlamydomonas reinhardtii 0.9000234857692546 28 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein 0.899277761505635 20 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein 0.8939722836399374 21 Cpa|evm.model.tig00001049.14 RNA biosynthesis.transcriptional activation.TUB transcription factor 0.8939545150128061 24 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component 0.8939081646920765 43 Cpa|evm.model.tig00021464.27 0.8926376745898854 37 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component 0.8921872018062001 25 Cpa|evm.model.tig00001187.20 26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica 0.8920551778995426 26 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana 0.8904420541143467 54 Cpa|evm.model.tig00000241.27 ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana 0.8890241160200043 28 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana 0.8879097476988654 30 Cpa|evm.model.tig00020544.4 0.8861670297758482 69 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.8839356931969948 32 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana 0.8838907776794934 88 Cpa|evm.model.tig00020554.11 Cytoplasmic dynein 2 light intermediate chain 1 OS=Chlamydomonas reinhardtii 0.8823866958979905 34 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component 0.8823077194550968 48 Cpa|evm.model.tig00021612.56 0.8806279448521004 36 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component 0.8799282727134239 45 Cpa|evm.model.tig00000241.181 0.8795507373645702 39 Cpa|evm.model.tig00000863.11 Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica 0.8790385173837253 39 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit 0.8790173498831922 46 Cpa|evm.model.tig00000073.33 Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.alpha catalytic subunit 0.8781333779427932 41 Cpa|evm.model.tig00020554.26 Cilia- and flagella-associated protein 53 OS=Chlamydomonas reinhardtii 0.8765369692792674 43 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component 0.8762965795868128 98 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana 0.8754515802812719 66 Cpa|evm.model.tig00000852.43 0.875099052310098 46 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component 0.8747171854408894 56 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component 0.8743226324007711 48 Cpa|evm.model.tig00020553.145 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component 0.8733406177738859 49 Cpa|evm.model.tig00001408.20 Intraflagellar transport protein 57 OS=Chlamydomonas reinhardtii 0.8731746884695005 66 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 0.8724421457110666 69 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit 0.8722626919415729 53 Cpa|evm.model.tig00000944.45 0.8716119920704625 54 Cpa|evm.model.tig00001408.10 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase 0.8712546514582411 55 Cpa|evm.model.tig00020610.20 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.delta subunit 0.8709350396878623 56 Cpa|evm.model.tig00000241.178 Cell cycle.interphase.DNA replication.elongation.DNA polymerase delta complex.POLD2 component 0.8707944564242053 57 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit 0.8706289901625468 58 Cpa|evm.model.tig00001093.6 Synaptotagmin-5 OS=Arabidopsis thaliana 0.8698676594143623 60 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase 0.8693751352659413 81 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component 0.8692310042775393 83 Cpa|evm.model.tig00001234.21 0.8690528863304843 63 Cpa|evm.model.tig00020684.33 RNA biosynthesis.transcriptional activation.CPP1-like transcription factor 0.8675746554410425 64 Cpa|evm.model.tig00000203.29 0.8671129627017861 65 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component 0.8668892041573487 66 Cpa|evm.model.tig00021464.26 0.8667023537059342 67 Cpa|evm.model.tig00000852.42 0.8663142571608653 68 Cpa|evm.model.tig00001336.10 Clathrin interactor EPSIN 2 OS=Arabidopsis thaliana 0.8656631330639236 69 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component 0.8653939246341957 91 Cpa|evm.model.tig00020629.133 0.8647121885809157 72 Cpa|evm.model.tig00000157.110 Cullin-4 OS=Arabidopsis thaliana 0.8640430448963208 73 Cpa|evm.model.tig00020544.6 0.8638814336320926 74 Cpa|evm.model.tig00020531.30 0.863611469433472 75 Cpa|evm.model.tig00021319.55 Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii 0.8636043759434013 92 Cpa|evm.model.tig00000128.3 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component 0.8635885932505916 77 Cpa|evm.model.tig00021357.7 0.8621997923923825 78 Cpa|evm.model.tig00021590.4 0.8620819741534094 80 Cpa|evm.model.tig00020563.191 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component 0.8610050209196063 81 Cpa|evm.model.tig00000640.7 Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana 0.8607911933681566 83 Cpa|evm.model.tig00020556.31 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase 0.8606017548719677 84 Cpa|evm.model.tig00021493.39 0.8605323814212881 85 Cpa|evm.model.tig00001038.4 0.8598783555083391 86 Cpa|evm.model.tig00000525.12 Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia peniculus 0.8593065128382517 90 Cpa|evm.model.tig00020553.152 0.8589245079088124 91 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana 0.8587816343325043 92 Cpa|evm.model.tig00000037.32 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 261.9) & Serine/threonine-protein kinase AtPK2/AtPK19 OS=Arabidopsis thaliana 0.8581033050523752 94 Cpa|evm.model.tig00020848.28 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 170.4) & Probable nucleoside diphosphate kinase 5 OS=Arabidopsis thaliana 0.8572154936105554 95 Cpa|evm.model.tig00020538.66 0.8567877859596762 96 Cpa|evm.model.tig00000388.24 0.8564414455792213 97 Cpa|evm.model.tig00000042.6 0.856285554491584 98 Cpa|evm.model.tig00021464.8 Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana 0.8559044238775421 100