Sequence Description Alias PCC hrr Cpa|evm.model.tig00000404.46 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.9103688885637836 2 Cpa|evm.model.tig00000983.26 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component 0.8927102515338542 2 Cpa|evm.model.tig00000403.99 0.8829024244792221 3 Cpa|evm.model.tig00020531.53 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 OS=Arabidopsis thaliana 0.8716547397322136 18 Cpa|evm.model.tig00001486.8 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone 0.8683033076639606 8 Cpa|evm.model.tig00021590.1 Cytoplasmic dynein 2 heavy chain 1 OS=Chlamydomonas reinhardtii 0.8653997628294046 6 Cpa|evm.model.tig00021014.10 DNA repair protein RAD5A OS=Arabidopsis thaliana 0.8634497900911895 22 Cpa|evm.model.tig00000480.13 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8609751963566503 12 Cpa|evm.model.tig00001234.8 Probable ubiquitin-like-specific protease 2A OS=Arabidopsis thaliana 0.8609690608254389 15 Cpa|evm.model.tig00020537.44 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor 0.8602692306031219 10 Cpa|evm.model.tig00020510.148 0.8566884623836681 20 Cpa|evm.model.tig00020903.20 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.HAF/TAF1 component 0.8532312832685868 12 Cpa|evm.model.tig00022080.18 Regulator of nonsense transcripts UPF2 OS=Arabidopsis thaliana 0.8502656348017167 13 Cpa|evm.model.tig00000217.38 0.8464804672005001 26 Cpa|evm.model.tig00021168.15 0.8462554944989874 81 Cpa|evm.model.tig00000204.43 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp5 RNA helicase 0.8462101654507851 16 Cpa|evm.model.tig00000076.132 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8437954452836693 17 Cpa|evm.model.tig00000404.28 Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana 0.8428742031743484 18 Cpa|evm.model.tig00000042.151 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8418118402797311 19 Cpa|evm.model.tig00021623.7 0.837729360798189 36 Cpa|evm.model.tig00021070.66 Kinesin-like protein KIN-4C OS=Arabidopsis thaliana 0.8363230414204854 21 Cpa|evm.model.tig00020614.59 Myosin-5 OS=Arabidopsis thaliana 0.8348232216040395 27 Cpa|evm.model.tig00020927.60 Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.ACX acyl CoA oxidase 0.8342219141156714 47 Cpa|evm.model.tig00000217.37 0.8315307538705438 28 Cpa|evm.model.tig00000806.17 0.8295412456000162 25 Cpa|evm.model.tig00001155.26 0.8262120102393102 28 Cpa|evm.model.tig00000430.21 0.8255327540739529 76 Cpa|evm.model.tig00000949.32 0.8252119826702712 59 Cpa|evm.model.tig00000939.9 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec13 scaffolding component 0.8246518807772809 30 Cpa|evm.model.tig00020538.11 Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana 0.8237867797263478 31 Cpa|evm.model.tig00020616.22 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.8230640226723652 61 Cpa|evm.model.tig00021357.33 Chloride channel protein CLC-d OS=Arabidopsis thaliana 0.818766900129761 71 Cpa|evm.model.tig00001214.2 0.8150857896781997 35 Cpa|evm.model.tig00001029.30 0.8138994577420774 96 Cpa|evm.model.tig00000865.66 0.8125679302405824 59 Cpa|evm.model.tig00020824.1 Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.AMSH3 deubiquitinase 0.8124886273367843 79 Cpa|evm.model.tig00021522.4 0.8114601929410012 39 Cpa|evm.model.tig00000851.24 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component 0.8111165007135982 80 Cpa|evm.model.tig00021244.31 Cyclin-dependent kinase E-1 OS=Arabidopsis thaliana 0.809283073181744 41 Cpa|evm.model.tig00000157.49 0.8081687941111759 42 Cpa|evm.model.tig00000842.29 0.8069572142015303 84 Cpa|evm.model.tig00020614.120 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG2 component 0.8060292032089321 46 Cpa|evm.model.tig00001484.1 0.8043933135384356 50 Cpa|evm.model.tig00021318.28 0.8027978473036282 56 Cpa|evm.model.tig00000692.63 0.8018512179569065 56 Cpa|evm.model.tig00021073.11 0.8004188019643 96 Cpa|evm.model.tig00001154.4 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component 0.7996649073252545 69 Cpa|evm.model.tig00000144.66 0.7987999000548193 91 Cpa|evm.model.tig00000865.37 NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana 0.7978637228918047 65 Cpa|evm.model.tig00000388.52 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component 0.7969932791964905 66 Cpa|evm.model.tig00001042.20 0.7945114930987066 69 Cpa|evm.model.tig00021537.69 0.7925392631105254 73 Cpa|evm.model.tig00020685.6 0.7901177935247274 75 Cpa|evm.model.tig00000498.17 0.7881540247368208 81 Cpa|evm.model.tig00000144.152 Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica 0.7879048778227082 82 Cpa|evm.model.tig00001224.1 Protein modification.phosphorylation.NEK kinase 0.7867689417312494 85 Cpa|evm.model.tig00000194.26 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana 0.7862847676354416 88 Cpa|evm.model.tig00021017.23 0.7846454078029883 96 Cpa|evm.model.tig00001042.10 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component 0.7846039003640555 97 Cpa|evm.model.tig00000622.19 0.7838229893940367 99 Cpa|evm.model.tig00001428.4 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component 0.7833492917085297 100