Sequence Description Alias PCC hrr Cpa|evm.model.tig00020554.80 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component 0.955257988335172 1 Cpa|evm.model.tig00000545.18 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component 0.9518790808136361 3 Cpa|evm.model.tig00020614.5 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component 0.9486041481881095 3 Cpa|evm.model.tig00020965.21 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component 0.9452536071468409 4 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana 0.9332571090062018 5 Cpa|evm.model.tig00020848.37 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase 0.9324491951568392 6 Cpa|evm.model.tig00001098.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component 0.9323173651619642 7 Cpa|evm.model.tig00020554.44 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component 0.9319218339499782 8 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component 0.9312014962615388 9 Cpa|evm.model.tig00020589.5 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26 component 0.9273538634673488 10 Cpa|evm.model.tig00001206.4 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 333.7) & Phosphoglycerate kinase 3, cytosolic OS=Arabidopsis thaliana 0.9264274408520229 11 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit 0.92419769709727 12 Cpa|evm.model.tig00001600.10 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase(50.5.3 : 314.8) & Triosephosphate isomerase, chloroplastic OS=Secale cereale 0.9214678408932746 13 Cpa|evm.model.tig00020675.94 0.9205398166116338 14 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana 0.9200240215265554 15 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana 0.9192691663712926 16 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component 0.9187806571382298 17 Cpa|evm.model.tig00001030.11 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 263.1) & Calcium-dependent protein kinase 10 OS=Oryza sativa subsp. japonica 0.9175350243951775 18 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase 0.9159751308551752 19 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component 0.9150142979993291 20 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit 0.9147945605532112 21 Cpa|evm.model.tig00021037.27 0.9147156264317559 22 Cpa|evm.model.tig00000692.65 Calmodulin-2 OS=Oryza sativa subsp. japonica 0.9141994663639076 23 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component 0.9130054917636652 33 Cpa|evm.model.tig00020903.33 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit 0.9092602010359949 25 Cpa|evm.model.tig00022075.52 14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana 0.9082397128085212 26 Cpa|evm.model.tig00021319.69 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana 0.9079649496403881 27 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component 0.9072373510341145 28 Cpa|evm.model.tig00021348.57 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component 0.9056261212561048 29 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component 0.9043029207603379 31 Cpa|evm.model.tig00021608.5 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN1 component 0.9030829642495273 31 Cpa|evm.model.tig00020710.65 Protein RER1C OS=Arabidopsis thaliana 0.9015779200001156 32 Cpa|evm.model.tig00000198.5 0.9010110108881254 33 Cpa|evm.model.tig00000808.43 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component 0.9005717492081727 34 Cpa|evm.model.tig00000037.19 0.8981467093860485 35 Cpa|evm.model.tig00021435.18 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component 0.8973115182070572 36 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana 0.8966117905749722 37 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component 0.894885628309213 38 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein 0.8936895636400638 39 Cpa|evm.model.tig00000203.31 0.8910308456391228 40 Cpa|evm.model.tig00020675.88 Multi-process regulation.programmed cell death.MCP1 metacaspase-like regulator 0.8881865265432761 41 Cpa|evm.model.tig00000042.179 Intraflagellar transport protein 56 OS=Chlamydomonas reinhardtii 0.8860796900458988 42 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component 0.884897925068503 51 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component 0.8844442664210624 44 Cpa|evm.model.tig00000144.125 Calcineurin B-like protein 2 OS=Arabidopsis thaliana 0.883733143456914 45 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer 0.8815330667873581 48 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit 0.8813833147139727 49 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana 0.8796003820744576 48 Cpa|evm.model.tig00021464.17 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana 0.8791431022705302 49 Cpa|evm.model.tig00000241.116 0.8788011478029536 50 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component 0.8776604727349949 51 Cpa|evm.model.tig00000944.21 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component 0.8756533613596409 52 Cpa|evm.model.tig00021168.13 AP-2 complex subunit mu OS=Arabidopsis thaliana 0.8753160093110119 62 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component 0.8752662317040671 54 Cpa|evm.model.tig00001374.6 0.8747075991258928 55 Cpa|evm.model.tig00020629.95 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana 0.8736672042422818 56 Cpa|evm.model.tig00001003.26 0.8725645978566811 58 Cpa|evm.model.tig00000076.87 U2 small nuclear ribonucleoprotein B OS=Oryza sativa subsp. indica 0.8717656924271969 59 Cpa|evm.model.tig00000912.18 0.8695608120121224 80 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component 0.8695225617978469 61 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component 0.8691576133298973 66 Cpa|evm.model.tig00021352.44 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana 0.8689948413664506 63 Cpa|evm.model.tig00000388.23 0.8686565661117348 64 Cpa|evm.model.tig00000241.32 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component 0.8685763875113588 65 Cpa|evm.model.tig00000217.32 AP-1 complex subunit gamma-1 OS=Arabidopsis thaliana 0.8677815369848726 66 Cpa|evm.model.tig00001371.17 0.8669817240540774 67 Cpa|evm.model.tig00001376.20 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component 0.8665866820344299 69 Cpa|evm.model.tig00021435.47 Calmodulin OS=Mougeotia scalaris 0.8664551030385357 74 Cpa|evm.model.tig00000663.16 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm2 component 0.866176298288493 71 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase 0.8659855208826008 72 Cpa|evm.model.tig00020684.43 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud31 component 0.8655199285551968 73 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase 0.8646604779072785 86 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor 0.8621237151559319 77 Cpa|evm.model.tig00021464.32 0.8619477205609787 78 Cpa|evm.model.tig00021612.51 0.8617982865652758 79 Cpa|evm.model.tig00000704.52 Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana 0.8615948183072908 80 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase 0.8614712644048936 81 Cpa|evm.model.tig00000144.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein 0.8609679182382325 82 Cpa|evm.model.tig00000821.8 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.p24-delta regulator protein 0.860817545760707 83 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component 0.8607386560967831 84 Cpa|evm.model.tig00000042.55 0.8577106168952384 85 Cpa|evm.model.tig00000802.46 0.856333453379153 86 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana 0.8558422416214289 88 Cpa|evm.model.tig00020572.40 0.8556721574071474 89 Cpa|evm.model.tig00000241.38 Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM7 component 0.8549706876825361 90 Cpa|evm.model.tig00000944.23 Protein degradation.peptide tagging.Homologous-to-Ubiquitin (HUB)-anchor addition.HUB ubiquitin-fold protein 0.8541828607569748 91 Cpa|evm.model.tig00000842.8 0.8511110926721699 95 Cpa|evm.model.tig00000144.7 0.8508112371864055 96 Cpa|evm.model.tig00000630.13 0.8492183712628976 98 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit 0.8484597063689484 99 Cpa|evm.model.tig00000459.29 0.8478481640688835 100