Sequence Description Alias PCC hrr Cpa|evm.model.tig00001071.12 0.9560251599471437 1 Cpa|evm.model.tig00020830.32 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.cpTatC component 0.9293811234579178 3 Cpa|evm.model.tig00021569.2 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 321.7) & Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Oryza sativa subsp. indica 0.9265864278009792 13 Cpa|evm.model.tig00020572.24 Lipid metabolism.glycerolipid synthesis.cardiolipin.cardiolipin synthase 0.9214622228936269 4 Cpa|evm.model.tig00001229.8 0.916818871602631 8 Cpa|evm.model.tig00020952.49 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.9154140846632981 6 Cpa|evm.model.tig00000655.31 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.9096595386684796 7 Cpa|evm.model.tig00021127.122 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic OS=Arabidopsis thaliana 0.9035765491532679 8 Cpa|evm.model.tig00000430.41 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) 0.902030523034867 9 Cpa|evm.model.tig00000101.3 0.9003058730944828 13 Cpa|evm.model.tig00022099.6 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component 0.8973212540657546 11 Cpa|evm.model.tig00020538.32 0.8966943978098088 18 Cpa|evm.model.tig00000792.24 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein 0.8949418817650179 26 Cpa|evm.model.tig00020610.25 Putative methyltransferase At1g22800, mitochondrial OS=Arabidopsis thaliana 0.8948557770463414 24 Cpa|evm.model.tig00000865.16 0.8915586429065803 15 Cpa|evm.model.tig00020830.3 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component 0.8892355168204362 16 Cpa|evm.model.tig00000459.55 AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.8883342471113731 17 Cpa|evm.model.tig00020614.38 0.887689683235136 18 Cpa|evm.model.tig00020825.7 0.8855737854714915 19 Cpa|evm.model.tig00000718.51 0.8836410013345904 20 Cpa|evm.model.tig00000658.25 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.883594327046257 21 Cpa|evm.model.tig00020941.46 0.8834757331563858 26 Cpa|evm.model.tig00000144.111 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease 0.8829644953136326 23 Cpa|evm.model.tig00000655.56 0.8816739850325275 24 Cpa|evm.model.tig00000093.199 0.8808253100804193 25 Cpa|evm.model.tig00021036.19 Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana 0.8791140228916742 26 Cpa|evm.model.tig00000605.31 0.8779143974595244 27 Cpa|evm.model.tig00021070.8 0.8748755623449692 28 Cpa|evm.model.tig00000821.52 0.8737451776645293 29 Cpa|evm.model.tig00021357.52 0.8726457871370267 30 Cpa|evm.model.tig00020592.36 0.8721994084908375 31 Cpa|evm.model.tig00021127.40 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor 0.8715288067336134 32 Cpa|evm.model.tig00000821.11 0.8705924443107474 33 Cpa|evm.model.tig00020553.195 0.8699034925113217 34 Cpa|evm.model.tig00000430.3 0.8698752637687177 35 Cpa|evm.model.tig00020571.18 0.8696050929701462 36 Cpa|evm.model.tig00020553.201 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana 0.866900018566296 37 Cpa|evm.model.tig00020515.11 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.TerC protein 0.8636686360971688 38 Cpa|evm.model.tig00000227.1 0.8625793384103062 39 Cpa|evm.model.tig00001052.5 0.8610620893188338 40 Cpa|evm.model.tig00021319.42 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase 0.8605742509937123 41 Cpa|evm.model.tig00000057.94 Lipid metabolism.glycerolipid synthesis.cardiolipin.cardiolipin transacylase 0.8605455476411645 42 Cpa|evm.model.tig00001033.3 0.8596660655567491 43 Cpa|evm.model.tig00000093.128 0.857636897967153 84 Cpa|evm.model.tig00000849.28 0.857386103777631 58 Cpa|evm.model.tig00000857.23 0.8567388601797798 46 Cpa|evm.model.tig00020848.14 0.8557950148908 71 Cpa|evm.model.tig00001333.21 0.8546636879775911 48 Cpa|evm.model.tig00020830.48 0.853343813195401 49 Cpa|evm.model.tig00021038.40 0.8527560951055121 50 Cpa|evm.model.tig00021038.91 0.8514527481638672 51 Cpa|evm.model.tig00021037.8 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 0.851278540257838 59 Cpa|evm.model.tig00000158.61 0.8493975641247462 53 Cpa|evm.model.tig00000498.40 Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana 0.8493879487650778 64 Cpa|evm.model.tig00021350.15 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8492671859342621 84 Cpa|evm.model.tig00020563.155 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component 0.848898236423167 56 Cpa|evm.model.tig00001424.9 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 0.8487277601436348 57 Cpa|evm.model.tig00001065.23 0.8461306905132396 58 Cpa|evm.model.tig00021318.25 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor 0.8455482268927433 59 Cpa|evm.model.tig00000204.28 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.8452363813113177 60 Cpa|evm.model.tig00021532.17 0.8451765057391619 61 Cpa|evm.model.tig00000403.95 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 99.4) & Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana 0.8445644133878972 79 Cpa|evm.model.tig00001030.22 Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum 0.8439278950669338 63 Cpa|evm.model.tig00000851.2 0.8435631046265899 64 Cpa|evm.model.tig00000870.9 0.843511426938085 65 Cpa|evm.model.tig00000076.15 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type) 0.841957521858104 72 Cpa|evm.model.tig00020943.67 Enzyme classification.EC_1 oxidoreductases.EC_1.6 oxidoreductase acting on NADH or NADPH(50.1.6 : 384.6) & NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana 0.8409762648918232 88 Cpa|evm.model.tig00000241.142 Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum 0.840133649183736 68 Cpa|evm.model.tig00020592.44 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8394426304133338 89 Cpa|evm.model.tig00000863.31 Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana 0.8391374932882814 70 Cpa|evm.model.tig00020675.17 0.8381811320202517 91 Cpa|evm.model.tig00000133.48 0.8379052489932615 72 Cpa|evm.model.tig00001003.14 0.8357089449474376 74 Cpa|evm.model.tig00000178.29 Amino acid metabolism.biosynthesis.aspartate family.asparagine.asparagine aminotransaminase 0.8354096670056363 75 Cpa|evm.model.tig00000870.34 NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum 0.8346742089997949 76 Cpa|evm.model.tig00001501.2 0.8341852595381638 78 Cpa|evm.model.tig00020710.100 0.8314062666551684 96 Cpa|evm.model.tig00021348.87 Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana 0.830659357689858 83 Cpa|evm.model.tig00021012.7 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 42.4) 0.830532080016412 84 Cpa|evm.model.tig00021435.31 0.8303982883986686 85 Cpa|evm.model.tig00000076.55 Cell wall.pectin.rhamnogalacturonan II.synthesis.2-keto-3-deoxymanno-octulosonic acid (KDO) synthesis.KDO-8-phosphate synthase 0.8302182239847821 86 Cpa|evm.model.tig00000405.61 0.8299784839589818 87 Cpa|evm.model.tig00001269.7 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein 0.829070324544066 89 Cpa|evm.model.tig00020553.276 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) 0.8280968122357724 98 Cpa|evm.model.tig00021070.9 0.8274818879040715 92 Cpa|evm.model.tig00020801.91 0.8274522399176567 93 Cpa|evm.model.tig00000655.57 ATPase ARSA1 OS=Chlamydomonas reinhardtii 0.8249472787556865 95 Cpa|evm.model.tig00000441.16 Solute transport.carrier-mediated transport.MC-type solute transporter 0.8242312193523488 96 Cpa|evm.model.tig00001420.2 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.8232898195686957 98 Cpa|evm.model.tig00020904.24 0.8221906112134775 100