Sequence Description Alias PCC hrr Cpa|evm.model.tig00020554.42 0.9398993362914945 2 Cpa|evm.model.tig00000980.6 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.928686564597673 2 Cpa|evm.model.tig00020554.145 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana 0.9236131459732412 5 Cpa|evm.model.tig00000615.61 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor 0.9225004156619535 4 Cpa|evm.model.tig00020544.6 0.9188146554295407 5 Cpa|evm.model.tig00022075.25 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp43 RNA helicase 0.9097053442753099 6 Cpa|evm.model.tig00021357.6 0.9088872155574039 9 Cpa|evm.model.tig00000944.38 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor 0.9083152611880322 8 Cpa|evm.model.tig00021350.40 0.9068374856015794 10 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.8995792633639608 13 Cpa|evm.model.tig00022075.32 Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana 0.885565736962697 11 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component 0.8851154772856484 16 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.884661270545824 68 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein 0.8836037726671157 20 Cpa|evm.model.tig00000789.39 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.883560729246212 15 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana 0.8835263247489615 37 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component 0.8834200537199877 45 Cpa|evm.model.tig00000789.38 0.8815660900354075 18 Cpa|evm.model.tig00000241.27 ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana 0.8811691977270313 24 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component 0.878157072756457 26 Cpa|evm.model.tig00021348.94 0.8747645079692562 96 Cpa|evm.model.tig00021357.9 0.872181837968377 22 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.8688724614133599 29 Cpa|evm.model.tig00021612.56 0.8676650950211254 46 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein 0.8661008356595459 83 Cpa|evm.model.tig00000829.11 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.865113660042694 43 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component 0.8639401240730559 91 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease 0.8638053689038985 98 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase 0.8605395379440058 85 Cpa|evm.model.tig00000555.1 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor 0.8577834963212998 35 Cpa|evm.model.tig00000704.62 0.8572704257997843 48 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana 0.8561361518684772 88 Cpa|evm.model.tig00000615.67 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Sof1 assembly factor 0.8519832235281357 40 Cpa|evm.model.tig00001372.8 0.8505746387781108 97 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.8499418962465783 89 Cpa|evm.model.tig00000194.42 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG2 regulatory GTPase 0.8498130573196253 47 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana 0.8485914801949833 58 Cpa|evm.model.tig00021464.8 Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana 0.8485649328429588 66 Cpa|evm.model.tig00020554.131 0.8479536898754502 51 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase 0.847508922077725 93 Cpa|evm.model.tig00000704.63 0.8463959836720798 80 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component 0.8459942687078513 87 Cpa|evm.model.tig00000842.29 0.8453284889913182 57 Cpa|evm.model.tig00021357.7 0.8451296083714553 58 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component 0.8440163207311181 83 Cpa|evm.model.tig00021534.2 0.8432043159904014 60 Cpa|evm.model.tig00000852.43 0.8425702434900145 63 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica 0.8423712592862292 64 Cpa|evm.model.tig00000944.35 0.841968835574482 65 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit 0.840329277531272 73 Cpa|evm.model.tig00021348.95 Ribosomal RNA small subunit methyltransferase OS=Arabidopsis thaliana 0.8391497251933437 71 Cpa|evm.model.tig00020553.162 N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana 0.8386075482426986 75 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin 0.8380702066105943 73 Cpa|evm.model.tig00001623.7 ATP-dependent 6-phosphofructokinase 6 OS=Arabidopsis thaliana 0.833231440348507 82 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor 0.831683709460763 85 Cpa|evm.model.tig00000912.6 Protein translocation.peroxisome.importomer translocation system.cargo-receptor system.Pex5 component 0.8306260643482769 86 Cpa|evm.model.tig00020723.6 0.8290194446280305 88