Sequence Description Alias PCC hrr AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.9057470853388904 1 AT3G55330 PsbP-like protein 1 PPL1 0.8856799352268476 12 AT1G43560 thioredoxin Y2 Aty2, ty2 0.8762092947102016 14 AT3G16250 NDH-dependent cyclic electron flow 1 NDF4 0.8761203546038283 7 AT2G21530 SMAD/FHA domain-containing protein 0.8748292366208789 10 AT1G27480 alpha/beta-Hydrolases superfamily protein 0.8718043426895523 6 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8715881427637254 19 AT2G48070 resistance to phytophthora 1 RPH1 0.8712265246103257 8 AT5G45680 FK506-binding protein 13 ATFKBP13, FKBP13 0.870022488831916 20 AT2G28605 Photosystem II reaction center PsbP family protein 0.8683007569071393 10 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8682026316639971 11 AT1G74730 Protein of unknown function (DUF1118) 0.8668020222509071 31 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8661874848930785 26 AT1G32470 Single hybrid motif superfamily protein 0.8659281654052912 24 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8658943164293712 28 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.8641382587269059 27 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.8635196996044902 29 AT1G50900 Ankyrin repeat family protein GDC1 0.8614824954260473 18 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0.8596321000392159 19 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8589020142770364 20 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8549490274403515 42 AT1G14150 PsbQ-like 2 PQL1, PQL2 0.8528831852496792 22 AT2G35370 glycine decarboxylase complex H GDCH 0.8519647241043831 35 AT2G01590 chlororespiratory reduction 3 CRR3 0.8496618855609446 33 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.8485121401171763 25 AT4G34190 stress enhanced protein 1 SEP1 0.8466425190526686 30 AT4G02530 chloroplast thylakoid lumen protein 0.8448552151173682 63 AT1G11860 Glycine cleavage T-protein family 0.8440130766555625 63 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein 0.8433086039203179 29 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8430747919066783 45 AT4G10300 RmlC-like cupins superfamily protein 0.8429691351352178 31 AT2G39470 PsbP-like protein 2 PPL2 0.8415902601312517 93 AT5G13510 Ribosomal protein L10 family protein 0.8413443326561412 38 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). 0.8411599811768393 34 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.841098930179742 35 AT3G26060 Thioredoxin superfamily protein ATPRX Q 0.8399459218633216 36 AT5G52780 Protein of unknown function (DUF3464) 0.8388899523311711 37 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.8358967834482695 95 AT1G16880 uridylyltransferase-related 0.8354253958333046 39 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8344147329245881 85 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8331564756427255 41 AT5G36120 cofactor assembly, complex C (B6F) CCB3, atylmg3, YLMG3 0.8313121444065484 42 AT5G20935 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8310710581844736 43 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8309959282702108 44 AT1G19150 photosystem I light harvesting complex gene 6 LHCA2*1, LHCA6 0.8307803376591486 66 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.8304234816131078 46 AT1G70760 inorganic carbon transport protein-related CRR23 0.8303667954025975 47 AT5G39210 chlororespiratory reduction 7 CRR7 0.8302974553285154 48 AT1G60950 2Fe-2S ferredoxin-like superfamily protein FED A, ATFD2 0.8301469465345378 49 AT1G04640 lipoyltransferase 2 LIP2 0.8300549243521009 50 AT5G51010 Rubredoxin-like superfamily protein 0.8288590839293052 51 AT4G18370 DEGP protease 5 HHOA, DEG5, DEGP5 0.8282228328467216 53 AT4G09650 ATP synthase delta-subunit gene ATPD 0.8260189853580633 73 AT4G00163 0.8260084788344362 55 AT4G14890 2Fe-2S ferredoxin-like superfamily protein FdC2 0.8250439750185868 56 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.8246555990975627 77 AT3G54210 Ribosomal protein L17 family protein 0.8233851446649237 62 AT5G08050 Protein of unknown function (DUF1118) 0.8230546316456853 64 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8225575474196474 60 AT3G47070 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8221324864046112 61 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.8216098193650119 62 AT1G78995 unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8185752381488681 63 AT1G05190 Ribosomal protein L6 family emb2394 0.8184873972244492 100 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.816544585227267 69 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.8149015209674416 66 AT4G39710 FK506-binding protein 16-2 FKBP16-2 0.8136964982330088 67 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8130486365829837 78 AT3G44020 thylakoid lumenal P17.1 protein 0.8129753733359782 70 AT3G26710 cofactor assembly of complex C CCB1 0.8121189909683587 79 AT1G50320 thioredoxin X THX, ATHX, ATX 0.8120197791557096 72 AT1G03630 protochlorophyllide oxidoreductase C POR C, PORC 0.811888476438336 89 AT1G18730 NDH dependent flow 6 NDF6 0.8114753909184866 74 AT3G56910 plastid-specific 50S ribosomal protein 5 PSRP5 0.8104539703878445 75 AT5G40950 ribosomal protein large subunit 27 RPL27 0.8101766632390879 94 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.8099479460087837 77 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.8080146852669478 78 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain family protein 0.8074536503970131 79 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.807220789063395 80 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8067966089430114 95 AT1G73060 Low PSII Accumulation 3 LPA3 0.8063011682185924 89 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8040259503495375 84 AT1G75350 Ribosomal protein L31 emb2184 0.8030221749033173 85 AT3G01440 PsbQ-like 1 PQL1, PQL2 0.802823397503629 86 AT2G33855 unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8022186082667316 87 AT2G26500 cytochrome b6f complex subunit (petM), putative 0.7999730179314064 89 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.7998702023677238 90 AT2G17695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.7996406088006084 91 AT5G52970 thylakoid lumen 15.0 kDa protein 0.7991154991353228 92 AT3G22210 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7981611487518526 93 AT2G06520 photosystem II subunit X PSBX 0.7950078218605865 94 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). 0.7945356472820244 95 AT4G12830 alpha/beta-Hydrolases superfamily protein 0.7929377917059623 96 AT1G05140 Peptidase M50 family protein 0.7920879333661429 98 AT4G00895 ATPase, F1 complex, OSCP/delta subunit protein 0.7918704667344673 99 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7916336263004915 100