Sequence Description Alias PCC hrr Cpa|evm.model.tig00001424.4 0.9205660892111084 9 Cpa|evm.model.tig00000829.5 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase 0.9200126857072586 2 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein 0.9177725505793043 8 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana 0.9160066478564424 11 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana 0.915729199298835 12 Cpa|evm.model.tig00000704.40 0.9136716370093347 19 Cpa|evm.model.tig00000241.177 0.9111158787392906 7 Cpa|evm.model.tig00020553.139 0.9048848500566921 11 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase 0.9021137496287798 16 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component 0.9001270175634384 29 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor 0.8925580603230472 11 Cpa|evm.model.tig00000704.36 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana 0.8921773685533533 12 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component 0.8900661973105927 25 Cpa|evm.model.tig00000057.98 0.8893740302181958 14 Cpa|evm.model.tig00020903.16 0.8887379892765709 15 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component 0.8862928216052357 77 Cpa|evm.model.tig00021123.23 0.8809150953338862 41 Cpa|evm.model.tig00001049.13 0.8801134509984705 38 Cpa|evm.model.tig00000808.7 Solute transport.carrier-mediated transport.DMT superfamily.CLT glutathione transporter 0.877413721854016 19 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.8760496061773287 71 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis 0.8753307300401222 51 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit 0.8750669216343426 55 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana 0.8701633221298533 52 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component 0.8699150338330659 52 Cpa|evm.model.tig00000704.42 0.868132202145062 38 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana 0.8677102951693055 82 Cpa|evm.model.tig00000144.51 Protein modification.disulfide bond formation.endoplasmic reticulum.thiol-disulfide oxidoreductase (ERO) 0.8673679368600605 28 Cpa|evm.model.tig00000319.24 0.8663716591156545 58 Cpa|evm.model.tig00001229.14 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM conjugation E2 protein 0.8614975460288937 37 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component 0.8611261659465203 72 Cpa|evm.model.tig00021680.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN4 component 0.860325149932564 34 Cpa|evm.model.tig00000455.17 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Pisum sativum 0.8598767485926568 36 Cpa|evm.model.tig00000944.34 0.8592134020668125 83 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein 0.8562733714655137 56 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana 0.8556961219319722 90 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin 0.8555668754322859 42 Cpa|evm.model.tig00000704.52 Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana 0.855372246856474 43 Cpa|evm.model.tig00000144.7 0.8553718267196274 44 Cpa|evm.model.tig00020710.117 0.8516151977854639 47 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana 0.8511477913941097 69 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component 0.8505788851133435 97 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component 0.8505369967060238 52 Cpa|evm.model.tig00020554.143 0.8503507858927073 60 Cpa|evm.model.tig00020554.44 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component 0.8476807754320653 64 Cpa|evm.model.tig00001206.17 0.8473617151991218 58 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana 0.8469718895649903 66 Cpa|evm.model.tig00000144.18 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.GOS group protein 0.8460550209940273 70 Cpa|evm.model.tig00000478.39 0.8458506893574488 86 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component 0.8455873985342602 90 Cpa|evm.model.tig00022075.54 Glycylpeptide N-tetradecanoyltransferase 1 OS=Arabidopsis thaliana 0.8455720909642706 66 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component 0.8451542084103132 67 Cpa|evm.model.tig00000144.174 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana 0.8439065345149038 69 Cpa|evm.model.tig00000663.16 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm2 component 0.8422281685757893 75 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana 0.8413282979816361 76 Cpa|evm.model.tig00020930.28 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica 0.8412068350943415 87 Cpa|evm.model.tig00021348.33 0.8411102220123914 76 Cpa|evm.model.tig00021348.85 0.8405729598387789 77 Cpa|evm.model.tig00000444.11 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.small subunit 0.8366910237234519 83 Cpa|evm.model.tig00000076.104 0.8355134726885086 85 Cpa|evm.model.tig00000852.40 0.833003359670851 88 Cpa|evm.model.tig00020934.50 0.8329197535953486 89 Cpa|evm.model.tig00000881.9 0.8314952039245669 92 Cpa|evm.model.tig00021181.11 0.8312236213243691 93 Cpa|evm.model.tig00021123.29 0.830852672441956 94 Cpa|evm.model.tig00020629.14 0.8307029845285856 95 Cpa|evm.model.tig00000789.42 0.8306373114421897 97 Cpa|evm.model.tig00020912.18 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.TFB2-type subunit 0.830569558103015 98 Cpa|evm.model.tig00001333.33 0.8282250064966274 100