Sequence Description Alias PCC hrr Cpa|evm.model.tig00020554.145 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana 0.9420757065545566 2 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor 0.9398993362914945 2 Cpa|evm.model.tig00000615.61 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor 0.9367803376424876 3 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.9283953773147955 7 Cpa|evm.model.tig00021357.6 0.9123152208681654 8 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein 0.9027554243634581 7 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana 0.9002483123951515 20 Cpa|evm.model.tig00000789.39 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.8907953857415186 8 Cpa|evm.model.tig00000980.6 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.8805457689273911 9 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component 0.8789302266588562 53 Cpa|evm.model.tig00020544.6 0.8760156390713644 26 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor 0.8749337395970295 15 Cpa|evm.model.tig00000615.67 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Sof1 assembly factor 0.8746855262565039 13 Cpa|evm.model.tig00022075.25 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp43 RNA helicase 0.8716546519345134 14 Cpa|evm.model.tig00020554.131 0.8683241654046456 15 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component 0.8625629835037352 53 Cpa|evm.model.tig00000789.38 0.862526720546565 17 Cpa|evm.model.tig00000076.89 Periodic tryptophan protein 2 OS=Arabidopsis thaliana 0.8615373807249553 18 Cpa|evm.model.tig00021350.31 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop58 snoRNP scaffold component 0.8609990290583162 19 Cpa|evm.model.tig00000944.38 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor 0.8588023877464869 20 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.8584967341105065 47 Cpa|evm.model.tig00000842.29 0.8506615548154878 22 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin 0.8494685986226642 44 Cpa|evm.model.tig00000403.66 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 11 0.8437413426230538 27 Cpa|evm.model.tig00021350.40 0.838349572391371 94 Cpa|evm.model.tig00022075.32 Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana 0.8377209203597102 31 Cpa|evm.model.tig00001107.1 RNA processing.RNA modification.rRNA/tRNA methylation.TRM61-TRM6 tRNA adenosine-methyltransferase complex.TRM6 component 0.8332972565489359 34 Cpa|evm.model.tig00000912.29 0.8249436060108686 54 Cpa|evm.model.tig00021582.9 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 5 0.8232113127048055 42 Cpa|evm.model.tig00000204.43 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp5 RNA helicase 0.8205367648077705 50 Cpa|evm.model.tig00001049.9 0.8192414710857384 80 Cpa|evm.model.tig00022075.45 0.8180938776688275 47 Cpa|evm.model.tig00000194.42 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG2 regulatory GTPase 0.8178321899055079 48 Cpa|evm.model.tig00000194.52 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF15 component 0.8116229869238765 55 Cpa|evm.model.tig00021612.48 0.8107617074943989 56 Cpa|evm.model.tig00000880.12 Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana 0.809242164430904 60 Cpa|evm.model.tig00001265.10 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase 0.8074019162061301 97 Cpa|evm.model.tig00001049.11 0.8062284799021493 77 Cpa|evm.model.tig00000381.6 0.805390188160079 67 Cpa|evm.model.tig00001073.2 0.8052081280539235 68 Cpa|evm.model.tig00000792.36 0.804067073851119 72 Cpa|evm.model.tig00001065.14 Pumilio homolog 1 OS=Arabidopsis thaliana 0.8035355815950533 73 Cpa|evm.model.tig00001049.16 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component 0.801138163838981 78 Cpa|evm.model.tig00001154.10 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor 0.7961719024941172 85 Cpa|evm.model.tig00000404.46 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.7951782205238176 88 Cpa|evm.model.tig00020723.108 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase 0.7931856456860762 95 Cpa|evm.model.tig00000203.25 DNA-directed RNA polymerase I subunit 1 OS=Arabidopsis thaliana 0.793000094972878 96 Cpa|evm.model.tig00020544.11 0.7917917465375436 98