Sequence Description Alias PCC hrr AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.9204102957056006 2 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.908380334848594 9 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8977206133467448 12 AT5G07020 proline-rich family protein 0.8951880209826846 8 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.8871463199499195 5 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.8830922220014064 9 AT1G06680 photosystem II subunit P-1 OE23, OEE2, PSBP-1, PSII-P 0.8782540076985369 19 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8748313833264697 13 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8720548194588243 20 AT1G15980 NDH-dependent cyclic electron flow 1 NDH48, NDF1 0.8718716447968478 32 AT1G54780 thylakoid lumen 18.3 kDa protein TLP18.3 0.8715002849430935 11 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.8710586436811568 45 AT3G54050 high cyclic electron flow 1 HCEF1 0.8709939856187043 43 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.867499114938161 60 AT4G38970 fructose-bisphosphate aldolase 2 FBA2 0.8641289313299899 15 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.8611595831398148 28 AT2G01110 Sec-independent periplasmic protein translocase PGA2, APG2, TATC, UNE3 0.8597192418315719 17 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.858557218904118 32 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.85847317711094 19 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.85666858023702 20 AT3G46780 plastid transcriptionally active 16 PTAC16 0.8554184609817523 40 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8549406315592981 22 AT5G66570 PS II oxygen-evolving complex 1 OEE33, PSBO1, OEE1, MSP-1, PSBO-1, OE33 0.8518728685646357 23 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8513898101532765 52 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8496391188434209 25 AT3G12780 phosphoglycerate kinase 1 PGK1 0.8494445592424185 42 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.8490899208540394 55 AT4G37930 serine transhydroxymethyltransferase 1 STM, SHM1, SHMT1 0.8466451861268257 42 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.8466395878459616 31 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8450633546443023 31 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8426873481599774 31 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). 0.8351786506946823 33 AT5G21430 Chaperone DnaJ-domain superfamily protein 0.8336404719852156 45 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.8331626037668858 40 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8324068444748848 54 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region ZKT 0.8322918229456779 69 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.8319840107831447 80 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GC1, SULA 0.8311767796174695 39 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.8278559169737093 40 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.8268297222993192 72 AT1G31330 photosystem I subunit F PSAF 0.8267723353273537 42 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8259769908599652 86 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8243087825728964 82 AT5G36700 2-phosphoglycolate phosphatase 1 PGLP1, ATPGLP1 0.8243087825728964 82 AT1G74730 Protein of unknown function (DUF1118) 0.8226923061403463 94 AT4G09010 ascorbate peroxidase 4 APX4, TL29 0.8225453087337835 84 AT1G15820 light harvesting complex photosystem II subunit 6 CP24, LHCB6 0.8209424650987156 49 AT2G39730 rubisco activase RCA 0.8203141628499071 50 AT4G12800 photosystem I subunit l PSAL 0.81993597946806 51 AT3G61470 photosystem I light harvesting complex gene 2 LHCA2 0.8169968157585574 52 AT5G20140 SOUL heme-binding family protein 0.8166860180770918 54 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.8161904007068914 54 AT4G10340 light harvesting complex of photosystem II 5 LHCB5 0.8161791429203505 55 AT3G14420 Aldolase-type TIM barrel family protein 0.8136133450190374 56 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8119410050891885 60 AT4G02770 photosystem I subunit D-1 PSAD-1 0.8098740013635346 60 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8074270705050974 62 AT2G32500 Stress responsive alpha-beta barrel domain protein 0.8072587314108403 63 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8068033225585649 68 AT1G03630 protochlorophyllide oxidoreductase C POR C, PORC 0.8054004562368 96 AT5G01530 light harvesting complex photosystem II LHCB4.1 0.8052535120147922 66 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8051868692410634 76 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8040481536792976 95 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 APL1, ADG2 0.8038489533993418 95 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.8035557086228482 70 AT1G32060 phosphoribulokinase PRK 0.8033440063080599 79 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8000670094537413 72 AT1G50320 thioredoxin X THX, ATHX, ATX 0.7994907276008684 73 AT3G15360 thioredoxin M-type 4 ATHM4, TRX-M4, ATM4 0.7986837778402299 74 AT4G39710 FK506-binding protein 16-2 FKBP16-2 0.7974660685101638 76 AT2G21330 fructose-bisphosphate aldolase 1 FBA1 0.7973411792676476 77 AT1G12250 Pentapeptide repeat-containing protein 0.7969832067188277 79 AT1G31190 myo-inositol monophosphatase like 1 IMPL1 0.7958013754890819 80 AT3G14415 Aldolase-type TIM barrel family protein 0.7957888780309331 82 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). 0.7956000020713039 83 AT1G61520 photosystem I light harvesting complex gene 3 LHCA3 0.7877407917197967 90 AT1G75460 ATP-dependent protease La (LON) domain protein 0.7867154358611588 91 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.7845631512019721 93 AT4G09350 Chaperone DnaJ-domain superfamily protein 0.7839362991862232 94 AT3G16140 photosystem I subunit H-1 PSAH-1 0.7829007049047092 95 AT5G38660 acclimation of photosynthesis to environment APE1 0.7821868426536851 96 AT3G01500 carbonic anhydrase 1 CA1, ATBCA1, SABP3, ATSABP3 0.7819829186037948 98 AT1G67090 ribulose bisphosphate carboxylase small chain 1A RBCS1A 0.7813870969754861 99