Sequence Description Alias PCC hrr Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana 0.9668621064150016 1 Cpa|evm.model.tig00001107.6 0.9568570686729987 3 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana 0.9551108481071054 3 Cpa|evm.model.tig00022075.35 0.9503344528546512 4 Cpa|evm.model.tig00001537.11 0.9426138579955545 5 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana 0.9301599455158094 10 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii 0.9300618685495892 14 Cpa|evm.model.tig00020544.4 0.929696298606938 9 Cpa|evm.model.tig00020848.76 0.9269294810841433 9 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.9234774107731873 10 Cpa|evm.model.tig00000388.13 0.921821690731816 11 Cpa|evm.model.tig00022075.56 Cilia- and flagella-associated protein 44 OS=Chlamydomonas reinhardtii 0.9210446267900542 20 Cpa|evm.model.tig00020553.149 0.9194115978623497 13 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase 0.9183648561327766 14 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase 0.9167421755185162 15 Cpa|evm.model.tig00020553.145 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component 0.9150658856030174 16 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component 0.9142882409955926 31 Cpa|evm.model.tig00020848.78 0.9125208231515564 18 Cpa|evm.model.tig00021168.13 AP-2 complex subunit mu OS=Arabidopsis thaliana 0.9098883758565608 19 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component 0.9087090044833436 20 Cpa|evm.model.tig00000704.70 Intraflagellar transport protein 81 OS=Chlamydomonas reinhardtii 0.9083392994568654 21 Cpa|evm.model.tig00021348.94 0.9079874974244336 28 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase 0.9078994427779947 52 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit 0.9077830248164124 24 Cpa|evm.model.tig00001107.5 0.905099214481958 33 Cpa|evm.model.tig00000241.27 ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana 0.9032660520589478 26 Cpa|evm.model.tig00000944.34 0.9017455887562308 27 Cpa|evm.model.tig00000525.9 0.9016935803383268 28 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana 0.8995773833409481 29 Cpa|evm.model.tig00000241.32 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component 0.8991824795112533 30 Cpa|evm.model.tig00020553.154 0.897913868992832 37 Cpa|evm.model.tig00021234.21 0.8978007202984021 43 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica 0.8967076270145072 33 Cpa|evm.model.tig00021319.36 Coiled-coil domain-containing protein 39 OS=Chlamydomonas reinhardtii 0.8962840429737862 43 Cpa|evm.model.tig00020544.2 0.8962817248483385 35 Cpa|evm.model.tig00021464.25 0.8962096854937581 41 Cpa|evm.model.tig00020848.59 Cytoskeleton.microtubular network.Dynein microtubule-based motor protein complex.intermediate chain 0.8956386754422945 51 Cpa|evm.model.tig00001424.4 0.8919885111194634 38 Cpa|evm.model.tig00000704.40 0.8912202333287027 47 Cpa|evm.model.tig00020904.92 0.8911995588752795 40 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit 0.8911953336714672 41 Cpa|evm.model.tig00021612.39 0.8904192512535937 42 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component 0.8887930382565677 43 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.8886876326102972 47 Cpa|evm.model.tig00000042.179 Intraflagellar transport protein 56 OS=Chlamydomonas reinhardtii 0.8881543867934792 45 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component 0.8869337714352719 74 Cpa|evm.model.tig00001206.18 0.886321932710112 47 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component 0.8851942183322199 48 Cpa|evm.model.tig00021612.56 0.8834583526941238 49 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component 0.8833378880022887 50 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component 0.8827696719254023 51 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component 0.8826975972017238 52 Cpa|evm.model.tig00021589.1 0.8822574296756296 88 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component 0.8821657425296149 72 Cpa|evm.model.tig00021319.55 Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii 0.88198519908756 56 Cpa|evm.model.tig00001229.13 0.8808796756326049 64 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana 0.8807538516672793 57 Cpa|evm.model.tig00000241.178 Cell cycle.interphase.DNA replication.elongation.DNA polymerase delta complex.POLD2 component 0.8791852914011158 58 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana 0.8790452344680163 59 Cpa|evm.model.tig00000704.46 Cilia- and flagella-associated protein 52 OS=Chlamydomonas reinhardtii 0.8784372677591994 84 Cpa|evm.model.tig00000912.18 0.876436875785929 66 Cpa|evm.model.tig00020675.2 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein 0.875776003610498 63 Cpa|evm.model.tig00000842.10 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana 0.8754845148882423 64 Cpa|evm.model.tig00000217.19 0.8752280733035074 65 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8744730160845237 66 Cpa|evm.model.tig00020538.66 0.874359823288975 67 Cpa|evm.model.tig00020801.87 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.8741467079412705 85 Cpa|evm.model.tig00000076.91 0.8728334113014203 90 Cpa|evm.model.tig00000829.11 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.8728115482504337 70 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component 0.8726618408331729 71 Cpa|evm.model.tig00000203.14 0.8723109264593073 72 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides 0.8714021349422264 73 Cpa|evm.model.tig00000402.71 Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii 0.8712176793176509 74 Cpa|evm.model.tig00000863.16 RNA biosynthesis.transcriptional activation.bHLH transcription factor 0.8711474907300414 75 Cpa|evm.model.tig00020531.35 0.8707711362843503 99 Cpa|evm.model.tig00021357.9 0.8707249265856243 77 Cpa|evm.model.tig00000789.46 0.8694776487643243 79 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana 0.8694710889055041 94 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein 0.8693751352659413 81 Cpa|evm.model.tig00000157.110 Cullin-4 OS=Arabidopsis thaliana 0.8681602180081452 82 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor 0.8674392016082116 88 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase 0.8672037587126374 84 Cpa|evm.model.tig00020918.14 Outer dynein arm protein 1 OS=Chlamydomonas reinhardtii 0.8670647074845954 85 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis 0.866325218462785 86 Cpa|evm.model.tig00000388.17 0.8661781987322325 87 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component 0.8658027596564586 88 Cpa|evm.model.tig00021590.4 0.865661283823213 89 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin 0.8649053108975582 90 Cpa|evm.model.tig00000194.20 0.8645349573494296 92 Cpa|evm.model.tig00000388.23 0.8644328799007022 93 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit 0.8642432781307696 95 Cpa|evm.model.tig00020934.33 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.CUL3 scaffold component 0.8626324377811624 100