Sequence Description Alias PCC hrr AT4G34190 stress enhanced protein 1 SEP1 0.8845695100010146 10 AT2G21530 SMAD/FHA domain-containing protein 0.8814708002098266 6 AT2G28605 Photosystem II reaction center PsbP family protein 0.8788254192119105 4 AT5G45680 FK506-binding protein 13 ATFKBP13, FKBP13 0.8720028402426326 17 AT2G35370 glycine decarboxylase complex H GDCH 0.871081860076302 20 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8653688122254012 29 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.863347486526952 7 AT1G32470 Single hybrid motif superfamily protein 0.8620118500373867 29 AT3G55330 PsbP-like protein 1 PPL1 0.8609276661191058 35 AT1G54500 Rubredoxin-like superfamily protein 0.8596321000392159 19 AT2G01590 chlororespiratory reduction 3 CRR3 0.8594335633936001 21 AT1G43560 thioredoxin Y2 Aty2, ty2 0.8580692710967811 24 AT4G02530 chloroplast thylakoid lumen protein 0.8577996107829972 39 AT2G32640 Lycopene beta/epsilon cyclase protein 0.8563459007656259 14 AT3G16250 NDH-dependent cyclic electron flow 1 NDF4 0.8495057706065304 21 AT5G08050 Protein of unknown function (DUF1118) 0.8481925533722618 30 AT1G04640 lipoyltransferase 2 LIP2 0.845551696030974 17 AT1G74730 Protein of unknown function (DUF1118) 0.8450739943599369 60 AT1G27480 alpha/beta-Hydrolases superfamily protein 0.8433156486823324 19 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.8416777127215529 43 AT2G39470 PsbP-like protein 2 PPL2 0.8398416626280927 97 AT3G26060 Thioredoxin superfamily protein ATPRX Q 0.8390241915177175 37 AT4G18370 DEGP protease 5 HHOA, DEG5, DEGP5 0.8387317715773396 23 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein 0.837933747134721 24 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8346777740153729 25 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.8345317381678385 26 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8341003160236231 82 AT1G03630 protochlorophyllide oxidoreductase C POR C, PORC 0.8325246642165435 44 AT4G28660 photosystem II reaction center PSB28 protein PSB28 0.8322539503345658 29 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8314401040546117 97 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.8297804915908971 88 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8287917863665524 61 AT1G76450 Photosystem II reaction center PsbP family protein 0.8281175855774069 78 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8280019606323317 34 AT5G39210 chlororespiratory reduction 7 CRR7 0.8257400521359977 35 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8254173773269132 36 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8249595119590241 37 AT3G59780 Rhodanese/Cell cycle control phosphatase superfamily protein 0.8248306074126607 83 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8228459250855998 92 AT2G48070 resistance to phytophthora 1 RPH1 0.8224617018142415 40 AT5G35220 Peptidase M50 family protein EGY1 0.8205761136694812 41 AT3G26710 cofactor assembly of complex C CCB1 0.8205144070277913 55 AT4G10300 RmlC-like cupins superfamily protein 0.8197492325211938 43 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8185270469450251 44 AT1G19150 photosystem I light harvesting complex gene 6 LHCA2*1, LHCA6 0.8169456018911702 85 AT5G39830 Trypsin family protein with PDZ domain DEGP8, DEG8 0.8165569514406267 46 AT1G32550 2Fe-2S ferredoxin-like superfamily protein FdC1 0.8151337064026293 74 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8145929072361111 87 AT2G17695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8144528462796745 49 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8121556379551241 93 AT3G44020 thylakoid lumenal P17.1 protein 0.8120003521559107 51 AT1G59840 cofactor assembly of complex C CCB4 0.8108889198103005 52 AT4G09650 ATP synthase delta-subunit gene ATPD 0.8101211938233873 92 AT5G17170 rubredoxin family protein ENH1 0.8096699752342132 55 AT5G62140 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.8095377865408112 56 AT1G14150 PsbQ-like 2 PQL1, PQL2 0.8093229593473092 57 AT1G18730 NDH dependent flow 6 NDF6 0.8088413502600353 58 AT5G40950 ribosomal protein large subunit 27 RPL27 0.8086576793216529 96 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.808633371749989 82 AT5G13510 Ribosomal protein L10 family protein 0.8079734081243685 70 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.8075642121466216 63 AT2G35130 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8074450387243293 64 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.807428265041552 65 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.806608238651859 86 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8062378645027105 67 AT1G64770 NDH-dependent cyclic electron flow 1 NDH45, NDF2 0.805831794048114 93 AT1G70760 inorganic carbon transport protein-related CRR23 0.8052432515881768 80 AT4G12830 alpha/beta-Hydrolases superfamily protein 0.8049150518431339 72 AT1G50450 Saccharopine dehydrogenase 0.8045561084104919 73 AT4G14890 2Fe-2S ferredoxin-like superfamily protein FdC2 0.8036160351081438 74 AT1G75350 Ribosomal protein L31 emb2184 0.8035353338507583 80 AT5G22800 Alanyl-tRNA synthetase, class IIc EMB86, EMB1030, EMB263 0.8032372280695734 76 AT3G08740 elongation factor P (EF-P) family protein 0.803203188237598 79 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain family protein 0.801838536038759 79 AT3G56910 plastid-specific 50S ribosomal protein 5 PSRP5 0.8006774512464034 80 AT1G22630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 86 proteins in 34 species: Archae - 0; Bacteria - 13; Metazoa - 27; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). 0.8003646766874195 81 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.7998941340450018 82 AT3G47070 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7969802357947717 85 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.795022679347086 86 AT2G24090 Ribosomal protein L35 0.7949073328441708 87 AT3G01440 PsbQ-like 1 PQL1, PQL2 0.794697359313696 88 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein 0.7940752864435662 90 AT1G31800 cytochrome P450, family 97, subfamily A, polypeptide 3 LUT5, CYP97A3 0.7936375498675339 91 AT1G50900 Ankyrin repeat family protein GDC1 0.7935704822904052 92 AT2G36990 RNApolymerase sigma-subunit F SIGF, SIG6, SOLDAT8, ATSIG6 0.7934709720768989 93 AT2G30170 Protein phosphatase 2C family protein 0.7934701234875299 94 AT1G16880 uridylyltransferase-related 0.7931494697915309 96 AT5G51010 Rubredoxin-like superfamily protein 0.7931473130851838 97 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.7926298209361947 99 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.792522388582197 100