Sequence Description Alias PCC hrr Cpa|evm.model.tig00021612.44 0.9305489910511759 8 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component 0.9305449152894355 9 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit 0.9248135508718179 15 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis 0.9236386362764436 4 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase 0.9178085564125303 12 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component 0.9146257864996196 6 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase 0.912606494469859 10 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component 0.9111499905655732 29 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana 0.9064716564480706 58 Cpa|evm.model.tig00000383.37 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia 0.9041933757614249 10 Cpa|evm.model.tig00021073.34 0.899693974043386 11 Cpa|evm.model.tig00021464.27 0.898684923238058 28 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor 0.8983727918240254 26 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana 0.8981906593286872 23 Cpa|evm.model.tig00000704.42 0.8956821434264056 15 Cpa|evm.model.tig00000829.13 0.8947563803505413 16 Cpa|evm.model.tig00020918.9 0.8912742266810916 47 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase 0.8901817656709481 90 Cpa|evm.model.tig00000217.34 0.8887701993394206 19 Cpa|evm.model.tig00001542.18 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-beta component 0.8883704434261903 20 Cpa|evm.model.tig00020904.56 0.887418156478507 21 Cpa|evm.model.tig00000704.40 0.8867988533527315 57 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana 0.8860496910661183 23 Cpa|evm.model.tig00001424.2 0.8849267664704193 24 Cpa|evm.model.tig00020684.43 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud31 component 0.8843536236466996 28 Cpa|evm.model.tig00021290.10 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.MAD2 checkpoint protein 0.8842903788110981 26 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum 0.8835623793553607 39 Cpa|evm.model.tig00000241.177 0.8831274411829241 29 Cpa|evm.model.tig00020553.139 0.8820370281338267 34 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component 0.8808410927992542 33 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana 0.8805419757830136 76 Cpa|evm.model.tig00021433.27 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component 0.880470385383372 33 Cpa|evm.model.tig00000663.16 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm2 component 0.8797651800445886 34 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase 0.8783167616184733 83 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.8782266344232943 66 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component 0.8775617306008265 51 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.8773531829293957 38 Cpa|evm.model.tig00020554.145 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana 0.877336971391191 39 Cpa|evm.model.tig00001333.27 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1-70K snRNP component 0.8771817379508965 40 Cpa|evm.model.tig00001206.10 Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana 0.8771081843237338 41 Cpa|evm.model.tig00000857.6 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.P23 Hsp90-co-chaperone 0.8769715840430743 48 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.8769141837888896 45 Cpa|evm.model.tig00001229.14 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM conjugation E2 protein 0.8768491058482434 44 Cpa|evm.model.tig00000241.28 U2 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana 0.8759876127917824 45 Cpa|evm.model.tig00000404.30 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP19 component 0.8726449106426951 47 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component 0.8724796375635209 66 Cpa|evm.model.tig00001049.13 0.8717842835390428 57 Cpa|evm.model.tig00001130.30 Intraflagellar transport protein 43 OS=Chlamydomonas reinhardtii 0.8716663456510326 50 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.8705400868790982 70 Cpa|evm.model.tig00000241.58 0.8704482696705774 53 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.8704325280467488 54 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana 0.8690853607627611 55 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase 0.8687116515385127 64 Cpa|evm.model.tig00021612.48 0.8685856408842497 57 Cpa|evm.model.tig00000704.36 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana 0.8683950452741271 58 Cpa|evm.model.tig00000718.39 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 8 0.868307844272882 59 Cpa|evm.model.tig00001372.8 0.8682612929485923 60 Cpa|evm.model.tig00000217.26 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component 0.8682304494394406 61 Cpa|evm.model.tig00000383.54 Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.8679488626010597 62 Cpa|evm.model.tig00000388.25 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component 0.8670950366623417 63 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component 0.8667700629742434 73 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component 0.8659672952304529 68 Cpa|evm.model.tig00020554.144 0.8651007188572306 66 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein 0.8641002052443892 67 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana 0.8634115855580666 93 Cpa|evm.model.tig00021433.15 0.863146781101758 70 Cpa|evm.model.tig00000403.66 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 11 0.8624025112519421 71 Cpa|evm.model.tig00000789.45 0.8623796809051011 72 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer 0.8622859272650433 97 Cpa|evm.model.tig00000944.19 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-F component 0.861260865274111 74 Cpa|evm.model.tig00020539.41 0.8610798265321448 75 Cpa|evm.model.tig00021123.23 0.8609368398611722 76 Cpa|evm.model.tig00001292.18 Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana 0.8605243104808715 77 Cpa|evm.model.tig00000194.23 0.8598356413328577 94 Cpa|evm.model.tig00000863.20 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component 0.8597201239042923 80 Cpa|evm.model.tig00021464.17 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana 0.8595628871160576 81 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana 0.8593578827558953 90 Cpa|evm.model.tig00000789.36 Protein translocation.nucleus.nucleocytoplasmic transport.RanBP1 GTPase activation accessory protein 0.8592744270367744 83 Cpa|evm.model.tig00020629.95 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana 0.8591422977669239 84 Cpa|evm.model.tig00000704.62 0.8585864221746803 85 Cpa|evm.model.tig00000144.51 Protein modification.disulfide bond formation.endoplasmic reticulum.thiol-disulfide oxidoreductase (ERO) 0.8580630989445989 86 Cpa|evm.model.tig00000842.8 0.8577018784076799 87 Cpa|evm.model.tig00021464.58 0.8564352085194081 88 Cpa|evm.model.tig00000319.24 0.8555390468966797 92 Cpa|evm.model.tig00000704.66 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor 0.8552274619273619 93 Cpa|evm.model.tig00000076.86 0.8543663118081217 94 Cpa|evm.model.tig00001284.12 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.HSCB chaperone component 0.8539493402521929 98 Cpa|evm.model.tig00020703.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.8529400576620145 97 Cpa|evm.model.tig00000944.21 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Magoh component 0.8528587927928059 98 Cpa|evm.model.tig00001299.13 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.Sar1-type GTPase 0.8521563615465698 99 Cpa|evm.model.tig00001029.10 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.adenylosuccinate synthase 0.8518890421434411 100