Sequence Description Alias PCC hrr Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) 0.947944986850135 1 Cpa|evm.model.tig00021348.94 0.9272727137571106 6 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.923570394619399 16 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein 0.9231594793815113 6 Cpa|evm.model.tig00001049.12 0.9226690071522249 8 Cpa|evm.model.tig00020903.19 0.9148245062883072 6 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.9137007366509826 15 Cpa|evm.model.tig00020554.15 0.909264885621162 10 Cpa|evm.model.tig00021234.23 Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana 0.9054683550233934 9 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein 0.904700390400273 19 Cpa|evm.model.tig00021350.40 0.9045246754036242 11 Cpa|evm.model.tig00020531.35 0.9028346241446096 32 Cpa|evm.model.tig00000203.14 0.9018375064766584 24 Cpa|evm.model.tig00021123.42 0.9008575011516052 22 Cpa|evm.model.tig00020918.7 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.9005476427271796 15 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component 0.9004098431837338 32 Cpa|evm.model.tig00001187.20 26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica 0.9001451949358777 17 Cpa|evm.model.tig00000912.6 Protein translocation.peroxisome.importomer translocation system.cargo-receptor system.Pex5 component 0.8995749283215988 18 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein 0.898632947901941 19 Cpa|evm.model.tig00000704.63 0.89839946819591 20 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 0.8978606354861902 31 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana 0.8976180944306494 53 Cpa|evm.model.tig00022075.36 Protein RMD5 homolog OS=Arabidopsis thaliana 0.8974317150282674 23 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component 0.8966332856166923 24 Cpa|evm.model.tig00000241.37 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 4 0.8955714101420489 25 Cpa|evm.model.tig00021357.9 0.8949074806488676 26 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica 0.8946687902694727 27 Cpa|evm.model.tig00020684.33 RNA biosynthesis.transcriptional activation.CPP1-like transcription factor 0.8946004778292882 28 Cpa|evm.model.tig00001049.14 RNA biosynthesis.transcriptional activation.TUB transcription factor 0.894417426748869 29 Cpa|evm.model.tig00021357.26 0.8943858266253448 37 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana 0.8918323285127282 32 Cpa|evm.model.tig00000852.36 0.8915381563448063 32 Cpa|evm.model.tig00021319.34 0.891019278239908 33 Cpa|evm.model.tig00020554.11 Cytoplasmic dynein 2 light intermediate chain 1 OS=Chlamydomonas reinhardtii 0.889896037192093 34 Cpa|evm.model.tig00000076.86 0.8888903923519617 35 Cpa|evm.model.tig00000863.32 0.8879074162946944 36 Cpa|evm.model.tig00000241.160 0.8855849224904545 38 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein 0.8853427936169411 39 Cpa|evm.model.tig00020544.4 0.8851538011224851 73 Cpa|evm.model.tig00021357.13 0.8828606545920371 42 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component 0.882547270117594 43 Cpa|evm.model.tig00021612.56 0.8821360482051868 44 Cpa|evm.model.tig00000944.35 0.8796148944639405 45 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein 0.8790173498831922 46 Cpa|evm.model.tig00001094.30 Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica 0.8785812496055394 47 Cpa|evm.model.tig00000829.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF2 component 0.877924256903042 49 Cpa|evm.model.tig00021464.59 0.8775061322712199 50 Cpa|evm.model.tig00000042.6 0.8767994039948828 51 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase 0.8763571895621015 52 Cpa|evm.model.tig00000194.23 0.8748822469924616 53 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component 0.8735066443847033 54 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component 0.8734758288023798 71 Cpa|evm.model.tig00021433.26 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.8701589624763914 58 Cpa|evm.model.tig00000615.76 0.8697598670672568 60 Cpa|evm.model.tig00021352.55 0.8682736469956321 63 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor 0.8682620217792649 75 Cpa|evm.model.tig00020554.78 Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana 0.8677887075909696 65 Cpa|evm.model.tig00001372.8 0.8676932012627441 66 Cpa|evm.model.tig00020538.66 0.867067805618871 67 Cpa|evm.model.tig00000319.31 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component 0.8669887293733821 68 Cpa|evm.model.tig00001487.15 0.8669618382194046 69 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase 0.866606131844266 83 Cpa|evm.model.tig00021433.40 External stimuli response.biotic stress.tobamovirus multiplication.ARL8 small GTPase 0.8665047293870567 71 Cpa|evm.model.tig00000842.16 0.8660591186971865 73 Cpa|evm.model.tig00000402.38 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase 0.8651754867498513 74 Cpa|evm.model.tig00021464.16 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT1 regulatory component 0.8637603340130228 75 Cpa|evm.model.tig00020610.43 0.8630303636743285 77 Cpa|evm.model.tig00001029.14 0.8628636011087083 78 Cpa|evm.model.tig00000789.42 0.8626283316889415 79 Cpa|evm.model.tig00020554.10 DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana 0.8624854356144923 80 Cpa|evm.model.tig00020554.12 0.8623818113892354 81 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component 0.8619958701105012 83 Cpa|evm.model.tig00021357.15 0.8616132592229542 84 Cpa|evm.model.tig00000944.20 0.8615853502545011 85 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit 0.8614660373524305 86 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana 0.8612428719303206 89 Cpa|evm.model.tig00000711.34 0.8611835424716425 90 Cpa|evm.model.tig00020553.153 Lipid metabolism.sphingolipid metabolism.serine C-palmitoyltransferase complex.catalytic subunit 1 0.8609633722392506 91 Cpa|evm.model.tig00001093.6 Synaptotagmin-5 OS=Arabidopsis thaliana 0.8606039203211023 92 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component 0.8604754746724966 93 Cpa|evm.model.tig00021589.34 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component 0.8603511935333512 94 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.8602687526962605 95 Cpa|evm.model.tig00000113.121 Calmodulin OS=Chlamydomonas reinhardtii 0.8601892529439255 96 Cpa|evm.model.tig00020554.13 0.859796836442643 97 Cpa|evm.model.tig00021352.46 0.8589490059507758 99 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana 0.8586933934614044 100