Sequence Description Alias PCC hrr Cpa|evm.model.tig00000042.11 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain 0.8819551483103512 3 Cpa|evm.model.tig00000402.41 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component 0.8684258838257032 33 Cpa|evm.model.tig00001154.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component 0.8642793101577575 4 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component 0.861085863374835 51 Cpa|evm.model.tig00001371.8 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT7 eta subunit 0.8603787873156956 11 Cpa|evm.model.tig00000073.33 Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.alpha catalytic subunit 0.8514664783402514 37 Cpa|evm.model.tig00000157.110 Cullin-4 OS=Arabidopsis thaliana 0.8508484829822857 27 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component 0.8507891343605782 93 Cpa|evm.model.tig00021234.18 0.8448463444649709 12 Cpa|evm.model.tig00020554.78 Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana 0.844455905286825 17 Cpa|evm.model.tig00000851.23 DNA damage-binding protein 1 OS=Solanum lycopersicum 0.8434601535022113 14 Cpa|evm.model.tig00020934.33 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.CUL3 scaffold component 0.841105122170587 56 Cpa|evm.model.tig00001094.1 0.8395878897138245 25 Cpa|evm.model.tig00000865.27 DExH-box ATP-dependent RNA helicase DExH12 OS=Arabidopsis thaliana 0.8372547294315515 17 Cpa|evm.model.tig00020554.83 0.8343510890732643 18 Cpa|evm.model.tig00001086.36 Dynamin-related protein 3A OS=Arabidopsis thaliana 0.8328093757349588 28 Cpa|evm.model.tig00000217.33 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1G large gamma subunit 0.8303971397381248 92 Cpa|evm.model.tig00020961.111 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.maintenance and regulation.VPS45 regulator protein 0.828452708034648 43 Cpa|evm.model.tig00000903.41 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component 0.8275817126468857 38 Cpa|evm.model.tig00000851.24 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component 0.8258877142363656 55 Cpa|evm.model.tig00000555.1 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor 0.8115132942693658 54 Cpa|evm.model.tig00000692.13 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-14 motor protein 0.8096597904816136 36 Cpa|evm.model.tig00021357.38 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-N-acetylglucosamine synthesis.de novo biosynthesis.glutamine-fructose-6-phosphate aminotransferase 0.8086882781434298 75 Cpa|evm.model.tig00000204.43 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp5 RNA helicase 0.8050545118856133 85 Cpa|evm.model.tig00021319.62 0.8043824270063361 96 Cpa|evm.model.tig00000852.23 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor 0.8035961066241555 45 Cpa|evm.model.tig00020554.46 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS53/HIT1 component 0.8005189354520033 59 Cpa|evm.model.tig00000241.134 EH domain-containing protein 2 OS=Arabidopsis thaliana 0.8003096947611891 48 Cpa|evm.model.tig00001154.10 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor 0.7931398139839176 54 Cpa|evm.model.tig00000076.101 Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.7926251675423984 55 Cpa|evm.model.tig00000093.136 Pre-mRNA-processing-splicing factor 8A OS=Arabidopsis thaliana 0.789059160022199 59 Cpa|evm.model.tig00020903.12 Cilia- and flagella-associated protein 58 OS=Chlamydomonas reinhardtii 0.7843970493175768 65 Cpa|evm.model.tig00000128.11 ISWI chromatin-remodeling complex ATPase CHR17 OS=Arabidopsis thaliana 0.7833503922910898 79 Cpa|evm.model.tig00001155.23 Phosphoinositide phosphatase SAC8 OS=Arabidopsis thaliana 0.7793128421679144 73 Cpa|evm.model.tig00001269.4 0.779171740080922 74 Cpa|evm.model.tig00020904.108 RNA biosynthesis.transcriptional activation.CSD (cold shock) transcription factor 0.778096435721379 83 Cpa|evm.model.tig00020531.50 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.7777923818872404 85 Cpa|evm.model.tig00000042.18 0.7759033391403265 90 Cpa|evm.model.tig00021046.12 0.7742504986193454 94 Cpa|evm.model.tig00020537.2 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit A 0.773391456957819 96