Sequence Description Alias PCC hrr Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana 0.9446689720805234 3 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana 0.9327991239416005 9 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase 0.9269294810841433 9 Cpa|evm.model.tig00020544.4 0.9245851522306171 14 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component 0.9232275038613448 17 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase 0.9207795494569605 35 Cpa|evm.model.tig00000912.18 0.9202782353211192 8 Cpa|evm.model.tig00020553.145 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component 0.9194464697357563 8 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana 0.9191577714489416 11 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor 0.9175367915065227 10 Cpa|evm.model.tig00020553.154 0.9156427985059616 14 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana 0.9147557195739797 37 Cpa|evm.model.tig00020553.149 0.9118456935428266 13 Cpa|evm.model.tig00000194.20 0.9103826604352191 14 Cpa|evm.model.tig00001107.5 0.9098838073596329 24 Cpa|evm.model.tig00020848.70 Gamma-tubulin complex component 3 OS=Arabidopsis thaliana 0.9082957349831722 16 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.9071381864532739 22 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component 0.9050169176180574 40 Cpa|evm.model.tig00021319.61 0.9043818555502051 23 Cpa|evm.model.tig00021319.35 0.9025893624598889 28 Cpa|evm.model.tig00021319.34 0.901524340795541 21 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component 0.9013771260256151 52 Cpa|evm.model.tig00000704.50 0.9012439466828105 36 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii 0.8999053465290597 53 Cpa|evm.model.tig00021589.1 0.8994792960689535 43 Cpa|evm.model.tig00000217.24 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana 0.8989624701257826 26 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) 0.8979322488215863 32 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase 0.8977088804715254 28 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica 0.8963453571909856 29 Cpa|evm.model.tig00021168.13 AP-2 complex subunit mu OS=Arabidopsis thaliana 0.8957161512744704 30 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component 0.8955197687732763 33 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana 0.8942969062316407 46 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit 0.8939902165116134 62 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component 0.8932894872953909 34 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component 0.8919525927436975 79 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana 0.8911786524541625 60 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit 0.889415163450766 37 Cpa|evm.model.tig00021348.94 0.8889766712518233 61 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.8887540820698254 46 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component 0.887449616975396 55 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana 0.8874361036901194 41 Cpa|evm.model.tig00021612.44 0.8870281628487187 67 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component 0.8857604428277525 43 Cpa|evm.model.tig00000829.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF2 component 0.8853909415003136 44 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana 0.8853142004572365 45 Cpa|evm.model.tig00001049.12 0.8847833971812439 51 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 0.884614822082018 47 Cpa|evm.model.tig00021357.13 0.8845985969819584 48 Cpa|evm.model.tig00000789.46 0.8831726493071116 49 Cpa|evm.model.tig00000704.40 0.8831655662291822 62 Cpa|evm.model.tig00021464.27 0.8826078201027631 51 Cpa|evm.model.tig00001085.12 0.8821675090855912 52 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component 0.8818183802757967 53 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer 0.8810279454199487 54 Cpa|evm.model.tig00020531.35 0.8806990544918082 70 Cpa|evm.model.tig00020554.78 Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana 0.8797877616450577 56 Cpa|evm.model.tig00000241.32 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component 0.8790690479511689 57 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component 0.8789083032899191 62 Cpa|evm.model.tig00000037.6 0.8787815053633993 72 Cpa|evm.model.tig00020539.41 0.8784553011928706 60 Cpa|evm.model.tig00021612.39 0.8781650444060132 61 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter 0.8780678380072404 62 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.8779686395009557 82 Cpa|evm.model.tig00000241.178 Cell cycle.interphase.DNA replication.elongation.DNA polymerase delta complex.POLD2 component 0.8777123974475057 64 Cpa|evm.model.tig00000203.14 0.877658391574455 65 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum 0.8775217215478245 66 Cpa|evm.model.tig00020918.9 0.8767645447684727 74 Cpa|evm.model.tig00000042.4 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.876681513535376 68 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component 0.8766374802021033 69 Cpa|evm.model.tig00020903.15 0.8762916134141787 70 Cpa|evm.model.tig00020554.15 0.8753588909649732 71 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component 0.8752152695732472 72 Cpa|evm.model.tig00001107.6 0.87479452765636 79 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein 0.8737604565495073 75 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase 0.8734625337287842 76 Cpa|evm.model.tig00000980.5 0.8734393570196982 87 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana 0.8734165124895144 78 Cpa|evm.model.tig00000525.9 0.8733203776929743 79 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component 0.8732635997133049 80 Cpa|evm.model.tig00020538.66 0.8724125163043477 81 Cpa|evm.model.tig00001029.17 0.8722935249428925 82 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase 0.8722713497232656 89 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein 0.8712588033313151 85 Cpa|evm.model.tig00020538.72 0.8708457562393709 86 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase 0.8704728577965714 87 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component 0.869482217454592 89 Cpa|evm.model.tig00000980.1 0.8694734477874698 90 Cpa|evm.model.tig00020675.2 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein 0.8684832861896072 91 Cpa|evm.model.tig00021464.30 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) 0.8683373963765018 92 Cpa|evm.model.tig00000037.18 0.8680421759457713 93 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component 0.8678056665505473 94 Cpa|evm.model.tig00000615.68 Ras-related protein RABA4a OS=Arabidopsis thaliana 0.867204848023569 95 Cpa|evm.model.tig00021464.50 0.8643560493699414 97 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana 0.8639096145139846 98 Cpa|evm.model.tig00022075.57 Chaperone protein dnaJ 6 OS=Arabidopsis thaliana 0.8630509204712724 99