Sequence Description Alias PCC hrr Cpa|evm.model.tig00001229.8 0.9256110160874413 6 Cpa|evm.model.tig00000802.18 0.9061830592132879 11 Cpa|evm.model.tig00020614.46 ABC transporter A family member 4 OS=Arabidopsis thaliana 0.9035765491532679 8 Cpa|evm.model.tig00020515.11 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.TerC protein 0.893074101093901 4 Cpa|evm.model.tig00000658.25 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8857728689919145 13 Cpa|evm.model.tig00000093.128 0.8849595083010369 46 Cpa|evm.model.tig00020952.49 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.88434737342609 7 Cpa|evm.model.tig00000863.47 Embryogenesis-associated protein EMB8 OS=Picea glauca 0.8829513049749939 29 Cpa|evm.model.tig00000849.28 0.8815133133568219 35 Cpa|evm.model.tig00021569.2 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 321.7) & Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Oryza sativa subsp. indica 0.8813954620251129 42 Cpa|evm.model.tig00020941.46 0.8796063000692061 30 Cpa|evm.model.tig00000403.33 0.8776517420604601 32 Cpa|evm.model.tig00020830.32 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.cpTatC component 0.8749511940867122 32 Cpa|evm.model.tig00020614.73 0.8736340420142983 51 Cpa|evm.model.tig00000459.55 AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.8735527716347256 17 Cpa|evm.model.tig00000792.24 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein 0.870744027072365 49 Cpa|evm.model.tig00000342.56 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.MPBQ methyltransferase (VTE3) 0.8696410019508544 36 Cpa|evm.model.tig00000792.58 0.8679395033245022 44 Cpa|evm.model.tig00020592.44 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8673788740950917 49 Cpa|evm.model.tig00020830.55 0.8653839645762813 67 Cpa|evm.model.tig00021127.121 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic OS=Arabidopsis thaliana 0.8642606213661793 21 Cpa|evm.model.tig00020675.17 0.8619769476586632 51 Cpa|evm.model.tig00021036.19 Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana 0.8619144268706065 23 Cpa|evm.model.tig00020610.25 Putative methyltransferase At1g22800, mitochondrial OS=Arabidopsis thaliana 0.8601934063553504 56 Cpa|evm.model.tig00021179.40 Carotenoid cleavage dioxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica 0.859483048199052 89 Cpa|evm.model.tig00021350.15 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.859307907593259 68 Cpa|evm.model.tig00000655.56 0.8553204339082033 30 Cpa|evm.model.tig00000718.3 ABC transporter C family member 6 OS=Arabidopsis thaliana 0.8545273763108238 64 Cpa|evm.model.tig00001501.2 0.8534892359665049 36 Cpa|evm.model.tig00000055.1 0.8534785030178766 55 Cpa|evm.model.tig00000133.48 0.8530813867293705 32 Cpa|evm.model.tig00020825.7 0.8528717102426483 47 Cpa|evm.model.tig00021037.8 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 0.8526530026018957 57 Cpa|evm.model.tig00020553.195 0.8526458496478106 34 Cpa|evm.model.tig00020614.38 0.8515099189609163 35 Cpa|evm.model.tig00020943.67 Enzyme classification.EC_1 oxidoreductases.EC_1.6 oxidoreductase acting on NADH or NADPH(50.1.6 : 384.6) & NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana 0.8512140146615802 74 Cpa|evm.model.tig00021318.25 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor 0.8505965509529462 45 Cpa|evm.model.tig00020848.14 0.8503253132957882 81 Cpa|evm.model.tig00000430.41 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) 0.8477056891790216 39 Cpa|evm.model.tig00000403.95 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 99.4) & Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana 0.8471322960916292 70 Cpa|evm.model.tig00000821.11 0.8471019729267936 46 Cpa|evm.model.tig00001065.21 0.8416340613564784 63 Cpa|evm.model.tig00001339.14 NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana 0.8387868172519111 93 Cpa|evm.model.tig00022099.6 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component 0.8386015497475071 78 Cpa|evm.model.tig00001224.18 Peroxiredoxin Q, chloroplastic (Fragment) OS=Sedum lineare 0.8368098001814129 58 Cpa|evm.model.tig00000441.16 Solute transport.carrier-mediated transport.MC-type solute transporter 0.8365986241149138 48 Cpa|evm.model.tig00000498.40 Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana 0.8361787479471785 100 Cpa|evm.model.tig00000144.22 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.alpha subunit 0.8351342547599682 50 Cpa|evm.model.tig00000655.31 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.8322273257854664 98 Cpa|evm.model.tig00021038.40 0.8307242208444879 57 Cpa|evm.model.tig00020538.32 0.8303535399349081 100 Cpa|evm.model.tig00001033.3 0.8300613584880625 82 Cpa|evm.model.tig00000555.20 0.8286158914377785 67 Cpa|evm.model.tig00001071.12 0.8273163173644671 65 Cpa|evm.model.tig00001408.12 Carbohydrate metabolism.starch metabolism.degradation.maltose metabolism.cytosolic glucanotransferase 0.8260708310627654 93 Cpa|evm.model.tig00020572.24 Lipid metabolism.glycerolipid synthesis.cardiolipin.cardiolipin synthase 0.8246087737582624 67 Cpa|evm.model.tig00000227.54 0.824298581040547 73 Cpa|evm.model.tig00000900.16 Carboxyl-terminal-processing peptidase 2, chloroplastic OS=Arabidopsis thaliana 0.823399860608458 73 Cpa|evm.model.tig00020934.52 0.8223623608936225 64 Cpa|evm.model.tig00000851.2 0.8216675981817849 78 Cpa|evm.model.tig00000792.54 0.8205063348225529 66 Cpa|evm.model.tig00000870.34 NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum 0.8204372160124394 82 Cpa|evm.model.tig00020556.66 0.8174810945812775 70 Cpa|evm.model.tig00000076.165 0.8170205349424531 77 Cpa|evm.model.tig00000076.24 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-E1 component 0.8165504912355975 74 Cpa|evm.model.tig00021070.8 0.8165466831101243 88 Cpa|evm.model.tig00001537.12 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 0.8148559431813702 79 Cpa|evm.model.tig00000158.61 0.8139661647980421 81 Cpa|evm.model.tig00000144.111 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease 0.8133960990344397 91 Cpa|evm.model.tig00000178.29 Amino acid metabolism.biosynthesis.aspartate family.asparagine.asparagine aminotransaminase 0.8132665896155057 83 Cpa|evm.model.tig00020553.76 0.8124039729736314 85 Cpa|evm.model.tig00001424.9 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 0.81235885138332 86 Cpa|evm.model.tig00020830.48 0.8112883126548168 89 Cpa|evm.model.tig00020553.201 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana 0.8106765569683592 90 Cpa|evm.model.tig00001368.12 Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana 0.8105960636676777 91 Cpa|evm.model.tig00021463.12 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) 0.810275138018433 92 Cpa|evm.model.tig00020816.2 Coenzyme metabolism.tetrapyrrol biosynthesis.heme synthesis and modification.ferrochelatase 0.8064959683338204 97